| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1352457 = | 153 (0.930) | 10 (0.060) | 9/254 | NT | 6.7% | intergenic (‑94/+46) | PP_1178/nrdA | hypothetical protein/ribonucleoside‑diphosphate reductase subunit alpha |
| ? | NC_002947 | 1352497 = | 133 (0.850) | intergenic (‑134/+6) | PP_1178/nrdA | hypothetical protein/ribonucleoside‑diphosphate reductase subunit alpha | |||||
CAACGCCGTTTCCAGCGGTGGCGACAGCGCCCCAGTCCAGGCAGCCGGCCCTGCGCCAGTGCCAAAGGCCTGCGCGATCGACGAGCCTGACTGCGAAGCCTGCCAGTAAGGCCTGAATGCCGTGCGGGGTGCCTACGGGTGCCCCGCGCGGCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1352611‑1352457‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcattCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCAGGGCCGGCTGCCTGGACTGGGGCGCTGTCGCCACCGCTGGAAACGGCGTTGAGCTTGCCGGTGTTGATGGTCGACTTCTCGGT > NC_002947/1352497‑1352643 CAACGCCGTTTCCAGCGGTGGCGACAGCGCCCCAGTCCAGGCAGCCGGCCCTGCGCCAGTGCCAAAGGCCTGCGCGATCGACGAGCCTGACTGCGAAGCCTGCCAGTAAGGCCTGAATGCCGTGCGGGGTGCCTACGGGTGCCCCGCGCG < 2:4955711/150‑1 AACGCCGTTTCCAGCGGGGGCGACAGCGCCCCAGTCCAGGCAGCCGGCCCTGCGCCAGTGCCAAAGGCCTGCGCGATCGACGAGCCTGACTGCGAAGCCTGCCAGTAAGGCCTGAATGCCGTGCGGGGTGCCTACGGGTGCCCCGCGCGG < 1:1364406/150‑1 GCCTGAATGCCGTGCGGGGTGCCTACGGGTGCCCCGCGCGGCATTCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCAGGGCCGGCTGCCTGGACTGGGGCGCTGTCGCCACCGCTGGA > 2:1627326/1‑150 CTGAATGCCGTGCGGGGTGCCTACGGGTGCCCCGCGCGGCATTCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCAGGGCCGGCTGCCTGGACTGGGGCGCTGTC < 1:2704797/136‑1 CTGAATGCCGTGCGGGGTGCCTACGGGTGCCCCGCGCGGCATTCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCAGGGCCGGCTGCCTGGACTGGGGCGCTGTC > 2:2704797/1‑136 CTGAATGCCGTGCGGGGTGCCTACGGGTGCCCCGCGCGGCATTCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTC < 2:5395613/76‑1 CTGAATGCCGTGCGGGGTGCCTACGGGTGCCCCGCGCGGCATTCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTC > 1:5395613/1‑76 GTGCGGGGTGCCTACGGGTGCCCCGCGCGGCATTCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCAGGGCCGGCTGCCTGGACTGGGGCGCTGTCGCCACCGCTGGAAACGGCGTTGA > 2:1373654/1‑150 TGCGGGGTGCCTACGGGTGCCCCGCGCGGCATTCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCAGGGCCGGCTGCCTGGACTGGGGCGCT < 1:4308277/123‑1 TGCGGGGTGCCTACGGGTGCCCCGCGCGGCATTCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCAGGGCCGGCTGCCTGGACTGGGGCGCT > 2:4308277/1‑123 TACGGGTGCCCCGCGCGGCATTTAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCAGGGCCGGCTGCCTGGACTGGGGCGCTGTCGCCACCGCTGGAAACGGCGTTGAGCTTGCCGGTGT > 2:3534558/1‑150 TACGGGTGCCCCGCGCGGCATTCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCAGGGCCGGCTGCCTGGACTGGGGCGCTGTCGCCACCGCTGGAAACGGCGTTGAGCTTGCCGGTGT < 1:1627326/150‑1 GCATTCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCAGGGCCGGCTGCCTGGACTGGGGCGCTGTCGCCACCGCTGGAAACGGCGTTGAGCTTGCCGGTGTTGA > 1:4474087/1‑136 GCATTCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCAGGGCCGGCTGCCTGGACTGGGGCGCTGTCGCCACCGCTGGAAACGGCGTTGAGCTTGCCGGTGTTGA < 2:4474087/136‑1 CATTCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCATGGCCGGCTGCCTGGACTGGGGCGCTGTCGCCACCGCTGGAAACGGCGTTGAGCTTGCCGGTGTTGATGGTCGACTTCTCGG > 1:42012/1‑150 ATTCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCAGGGCCGGCTGCCTGGACTGGGGCGCTGTCGCCACCGCTGGAAACGGCGTTGAGCTTGCCGGTGTTGATGGTCGACTTCTCGGT > 2:2992236/1‑150 ATTCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCAGGGCCGGCTGCCTGGACTGGGGCGCTGTCGCCACCGCTGGAAACGGCGTTGAGCTTGCCGGTGTTGATGGTCGACTTCTCGGT > 2:4710956/1‑150 ATTCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCAGGGCCGGCTGCCTGGACTGGGGCGCTGTCGCCACCGCTGGAAACGGCGTTGAGCTTGCCGGTGTTGATGGTCGACTTCTCGGT < 1:217663/150‑1 ATTCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCAGGGCCGGCTGCCTGGACTGGGGCGCTGTCGCCACCGCTGGAAACGGCGTTGAGCTTGCCGGTGTTGATGGTCGACTTCTC > 1:3153246/1‑147 ATTCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCAGGGCCGGCTGCCTGGACTGGGGCGCTGTCGCCACCGCTGGAAACGGCGTTGAGCTTGCCGGTGTTGATGGTCGACTTCTC < 2:3153246/147‑1 CAACGCCGTTTCCAGCGGTGGCGACAGCGCCCCAGTCCAGGCAGCCGGCCCTGCGCCAGTGCCAAAGGCCTGCGCGATCGACGAGCCTGACTGCGAAGCCTGCCAGTAAGGCCTGAATGCCGTGCGGGGTGCCTACGGGTGCCCCGCGCGGCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1352611‑1352457‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcattCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCAGGGCCGGCTGCCTGGACTGGGGCGCTGTCGCCACCGCTGGAAACGGCGTTGAGCTTGCCGGTGTTGATGGTCGACTTCTCGGT > NC_002947/1352497‑1352643 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |