| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1371748 | 195 (1.190) | 11 (0.070) | 6/246 | NT | 5.9% | intergenic (+15/+57) | PP_1196/rimO | hypothetical protein/ribosomal protein S12 methylthiotransferase |
| ? | NC_002947 | = 1371777 | 172 (1.140) | intergenic (+44/+28) | PP_1196/rimO | hypothetical protein/ribosomal protein S12 methylthiotransferase | |||||
GACCGGGGCGCAGATCAAGGAGCTTACCCTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1371589‑1371748‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagcccctgcCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTTTTGTCAGAACGTGTGAAACAGCATCAGGCCGCCCTCGGCATCCGGGCTGGCATCCGAGAAGCCTTTGACTGCATAGAGTTGGACTTTCCACTGCGGGTTGAGCTTGTG < NC_002947/1371777‑1371629 GACCGGGGCGCAGATCAAGGAGCTTACCCTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAA < 1:4557744/150‑1 CCGGGGCGCAGATCAAGGAGCTTACCCTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAA < 1:5352289/150‑1 CCGGGGCGCAGATCAAGGAGCTTACCCTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAA < 1:4797943/150‑1 GGGGCGCAGATCAAGGAGCTTACCCTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGC < 1:1631898/150‑1 GGGCGCAGATCAAGGAGCTTACCCTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCC > 2:956852/1‑150 GGCGCAGATCAAGGAGCTTACCCTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCC < 2:4523418/150‑1 CGCAGATCAAGGAGCTTACCCTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCT < 1:1237040/150‑1 CGCAGATCAAGGAGCTTACCCTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCT < 1:1953983/150‑1 GCAGATCAAGGAGCTTACCCTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTG > 1:1547766/1‑150 GCAGATCAAGGAGCTTACCCTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTG > 1:3284337/1‑150 GCAGATCAAGGAGCTTACCCTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTG > 1:3284354/1‑150 CAGATCAAGGAGCTTACCCTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGC < 2:3197020/150‑1 TCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCCCCGG‑CGTTCTCCATAGGGAATGAC > 1:3939100/1‑150 AAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAG < 2:98912/150‑1 AAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAG < 2:3939100/150‑1 GCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAGGG < 1:3791895/150‑1 AAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAG > 1:1721382/1‑111 AAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAG > 1:1721443/1‑111 AAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAG < 2:1721382/111‑1 AAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAG < 2:1721443/111‑1 TGTTTCACACGTTCTGACAAAAAAGCCCCTGCCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTTTTGTCAGAACGTGTGAAACAGCATCAGGCCGCCCTCGGCATCCGGGCTGGCATCCGAGAAGCCTTTGACTGCATAGA > 2:5440740/1‑150 CACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTTTTGTCAGAACGTGTGAAACAGCATCAGGCCGCCCTCGGCATCCGGGCTGGCATCCGAGAAGCCTTTGACTGCATAGAGTTGGAC > 1:2982119/1‑150 CACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTTTTGTCAGAACGTGTGAAACAGCATCAGGCCGCCCTCGGCATCCGGGCTGGCATCCGAGAAGCCTTTGACTGCATAGAGTTGGAC > 1:2982132/1‑150 AAAGCCCCTGCCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTTTTGTCAGAACGTGTGAAACAGCATCAGGCCGCCCTCGGCATCCGGGCTGGCATCCGAGAAGCCTTTGACTGCATAGAGTTGGACTTTCCACTGCGGGT < 2:1328008/150‑1 AAGCCCCTGCCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTTTTGTCAGAACGTGTGAAACAGCATCAGGCCGCCCTCGGCATCCGGGCTGGCATCCGAGAAGCCTTTGACTGCATAGAGTTGGACTTTCCACTGCGGGTT < 1:4192846/150‑1 AAGCCCCTGCCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTTTTGTCAGAACGTGTGAAACAGCATCAGGCCGCCCTCGGCATCCGGGCTGGCATCCGAGAAGCCTTTGACTGCATAGAGTTGGACTTTCCACTGCGGGTT < 2:5220664/150‑1 AAGCCCCTGCCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTTTTGTCAGAACGTGTGAAACAGCATCAGGCCGCCCTCGGCATCCGGGCTGGCATCCGAGAAGCCTTTGACTGCATAGAGTTGGACTTTCCACTGCGGGTT > 1:5014615/1‑150 CCCCTGCCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTTTTGTCAGAACGTGTGAAACAGCATCAGGCCGCCCTCGGCATCCGGGCTGGCATCCGAGAAGCCTTTGACTGCATAGAGTTGGACTTTCCACTGCGGGTTGAG > 2:5012282/1‑150 CCCCTGCCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTTTTGTCAGAACGTGTGAAACAGCATCAGGCCGCCCTCGGCATCCGGGCTGGCATCCGAGAAGCCTTTGACTGCATAGAGTTGGACTTTCCACTGCGGGTTGAG > 2:5222280/1‑150 CCCCTGCCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTTTTGTCAGAACGTGTGAAACAGCATCAGGCCGCCCTCGGCATCCGGGCTGGCATCCGAGAAGCCTTTGACTGCATAGAGTTGGACTTTCCACTGCGGGTTGAG < 1:368977/150‑1 CCCTGCCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTTTTGTCAGAACGTGTGAAACAGCATCAGGCCGCCCTCGGCATCCGGGCTGGCATCCGAGAAGCCTTTGACTGCATAGAGTTGGACTTTCCA > 2:2879431/1‑137 CCCTGCCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTTTTGTCAGAACGTGTGAAACAGCATCAGGCCGCCCTCGGCATCCGGGCTGGCATCCGAGAAGCCTTTGACTGCATAGAGTTGGACTTTCCA < 1:2879431/137‑1 CTGCCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTTTTGTCAGAACGTGTGAAACAGCATCAGGCCGCCCTCGGCATCCGGGCTGGCATCCGAGAAGCCTTTGACTGCATAGAGTTGGACTTTCCACTGCGGGTTGAGCTT > 2:5061928/1‑150 CTGCCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTTTTGTCAGAACGTGTGAAACAGCATCAGGCCGCCCTCGGCATCCGGGCTGGCATCCGAGAAGCCTTTGACTGCATAGAGTTGGACTTTCCACTGCGGGTTGAGCTT > 2:619796/1‑150 GCCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTTTTGTCAGAACGTGTGAAACAGCATCAGGCCGCCCTCGGCATCCGGGCTGGCATCCGAGAAGCCTTTGACTGCATAGAGTTGGACTTTCCACTGCGGGTTGAGCTTGT > 2:365634/1‑150 GCCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTTTTGTCAGAACGTGTGAAACAGCATCAGGCCGCCCTCGGCATCCGGGCTGGCATCCGAGAAGCCTTTGACTGCATAGAGTTGGACTTTCCACTGCGGGTTGAGCTTGT < 1:3283899/150‑1 CCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTTTTGTCAGAACGTGTGAAACAGCATCAGGCCGCCCTCGGCATCCGGGCTGGCATCCGAGAAGCCTTTGACTGCATAGAGTTGGACTTTCCACTGCGGGTTGAGCTTGTG < 1:3158941/150‑1 CCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTTTTGTCAGAACGTGTGAAACAGCATCAGGCCGCCCTCGGCATCCGGGCTGGCATCCGAGAAGCCTTTGACTGCATAGAGTTGGACTTTCCACTGCGGGTTGAGCTTGTG < 2:578641/150‑1 GACCGGGGCGCAGATCAAGGAGCTTACCCTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1371589‑1371748‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagcccctgcCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTTTTGTCAGAACGTGTGAAACAGCATCAGGCCGCCCTCGGCATCCGGGCTGGCATCCGAGAAGCCTTTGACTGCATAGAGTTGGACTTTCCACTGCGGGTTGAGCTTGTG < NC_002947/1371777‑1371629 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |