| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1426482 | NA (NA) | 6 (0.040) | 3/260 | NT | NA | coding (373/1422 nt) | PP_1250 | group II intron‑encoding maturase |
| ? | NC_002947 | = 1426517 | NA (NA) | coding (408/1422 nt) | PP_1250 | group II intron‑encoding maturase | |||||
GCAACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGGCGGGCTACGTGAGACAGTATTGGCCAACCCTCAAGGTCAGGTTACTGGCCGGTGAATACCAGCCCCAAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1426330‑1426482‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgATCCACGACGCTGGGGATTCCCAGTTGCCGTGTGCCGCCCTGCGGCTTGGGAATTTCAACCGCTCGCACTGCTTGGGGCTGGTATTCACCGGCCAGTAACCTGACCTTGAGGGTTGGCCAATACTGTCTCACGTAGCCCGCCAAGTCAG < NC_002947/1426517‑1426369 GCAACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGGCGGGCTACGTGAGACAGTATTGGCCAACCCTCAAGGTCAGGTTACTGGCCGGTGAATACCAGCCCCAAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGG < 2:549079/150‑1GCAACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGGCGGGCTACGTGAGACAGTATTGGCCAACCCTCAAGGTCAGGTTACTGGCCGGTGAATACCAGCCCCAAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGG > 2:3779338/1‑150 CAACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGGCGGGCTACGTGAGACAGTATTGGCCAACCCTCAAGGTCAGGTTACTGGCCGGTGAATACCAGCCCCCAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGGG < 1:2950883/150‑1 CAACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGGCGGGCTACGTGAGACAGTATTGGCCAACCCTCAAGGTCAGGTTACTGGCCGGTGAATACCAGCCCCAAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGGG < 1:999969/150‑1 AACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGGCGGGCTACGTGAGACAGTATTGGCCAACCCTCAAGGTCAGGTTACTGGCCGGTGAATACCAGCCCCAAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGGGC > 1:194886/1‑150 AACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGGCGGGCTACGTGAGACAGTATTGGCCAACCCTCAAGGTCAGGTTACTGGCCGGTGAATACCAGCCCCAAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGGGC > 1:1603299/1‑150 AACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGGCGGGCTACGTGAGACAGTATTGGCCAACCCTCAAGGTCAGGTTACTGGCCGGTGAATACCAGCCCCAAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGGGC < 1:474919/150‑1 AACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGGCGGGCTACGTGAGACAGTATTGGCCAACCCTCAAGGTCAGGTTACTGGCCGGTGAATACCAGCCCCAAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGGGC > 1:4175296/1‑150 AACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGGCGGGCTACGTGAGACAGTATTGGCCAACCCTCAAGGTCAGGTTACTGGCCGGTGAATACCAGCCCCAAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGGGC > 1:4175283/1‑150 AACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGGCGGGCTACGTGAGACAGTATTGGCCAACCCTCAAGGTCAGGTTACTGGCCGGTGAATACCAGCCCCAAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGGGC < 2:4295772/150‑1 AACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGGCGGGCTACGTGAGACAGTATTGGCCAACCCTCAAGGTCAGGTTACTGGCCGGTGAATACCAGCCCCAAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGGGC > 1:3340072/1‑150 AACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGGCGGGCTACGTGAGACAGTATTGGCCAACCCTCAAGGTCAGGTTACTGGCCGGTGAATACCAGCCCCAAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGGGC > 1:3175549/1‑150 AACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGGCGGGCTACGTGAGACAGTATTGGCCAACCCTCAAGGTCAGGTTACTGGCCGGTGAATACCAGCCCCAAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGGGC < 1:246750/150‑1 ACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGGCGGGCTACGTGAGACAGTATTGGCCAACCCTCAAGGTCAGGTTACTGGCCGGTGAATACCAGCCCCAAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGGGCG > 2:5048953/1‑150 ACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGGCGGGCTACGTGAGACAGTATTGGCCAACCCTCAAGGTCAGGTTACTGGCCGGTGAATACCAGCCCCAAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGGGCG < 1:4209726/150‑1 ACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGGCGGGCTACGTGAGACAGTATTGGCCAACCCTCAAGGTCAGGTTACTGGCCGGTGAATACCAGCCCCAAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGGGCG > 1:228228/1‑150 ACGGTCGCTGACTTGGCGGGCTACGTGAGACAGTATTGGCCAACCCTCACGGTCAGGTTACGGGCCGGTGAATACCTGCCCCAAGCAGTGCGAGCGGTTGAAATTCCCACGCCGCAGGGCGGCACACGACGCTGGGGATTCCCAGTTGCC < 1:5173005/150‑1 GGCGGGCTACGTGAAACAGTATTGGCCAACCCTCAAGGCCAGGTTGCTGGCCGGTGAATACCATCCCCAAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGGGCGATCCACGACGCTGGGGATACCCAGTTGCCGTGTGCCGCCCTGC < 1:820999/150‑1 GCCAACCCTCAAGGTCAGGTTACTGGCCGGTGAATACCAGCCCCAAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGGGCGATCCACGACGCTGGGGATTCCCAGTTGCCGTGTGCCGCCCTGCGGCTT < 1:979015/131‑1 GCCAACCCTCAAGGTCAGGTTACTGGCCGGTGAATACCAGCCCCAAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGGGCGATCCACGACGCTGGGGATTCCCAGTTGCCGTGTGCCGCCCTGCGGCTT > 2:979015/1‑131 catCCCCAAGCAGTGCGAGCGGTTGAAATACCCAAGCCGCAGGGCGATCCACGACGCTGGGGATACCCAGTTGCCGTGTGCCGCCCTGCG < 1:4103949/87‑1 catCCCCAAGCAGTGCGAGCGGTTGAAATACCCAAGCCGCAGGGCGATCCACGACGCTGGGGATACCCAGTTGCCGTGTGCCGCCCTGCG > 2:4103949/4‑90 tGCGATCCACGACGCTGTGGATTCCCAGTTGCCGTGTGCCGCCCTGCGGCTTGGGAATTTCAACCGCTCGCACTGCTTGGGGCTGGTATTCACCGGCCAGTAACCTGACCTTGAGGGTTGGCCAATACTGTCTCACGTAGCCCGCCAAGT < 1:3992037/149‑1 GGCGATCCACGACGCTGGGGATTCCCAGTTGCCGTGTGCCGCCCTGCGGCTTGGGAATTTCAACCGCTCGCACTGCTTGGGGCTGGTATTCACCGGCCAGTAACCTGACCTTGAGGGTTGGCCAATACTGTCTCACGTAGCCCGCCAAGT > 2:1299343/1‑150 GGCGATCCACGACGCTGGGGATTCCCAGTTGCCGTGTGCCGCCCTGCGGCTTGGGAATTTCAACCGCTCGCACTGCTTGGGGCTGGTATTCACCGGCCAGTAACCTGACCTTGAGGGTTGGCCAATACTGTCTCACGTAGCCCGCCAAGT > 1:3909170/1‑150 GGCGATCCACGACGCTGGGGATTCCCAGTTGCCGTGTGCCGCCCTGCGGCTTGGGAATTTCAACCGCTCGCACTGCTTGGGGCTGGTATTCACCGGCCAGTAACCTGACCTTGAGGGTTGGCCAATACTGTCTCACGTAGCCCGCCAAGT > 1:336040/1‑150 GGCGATCCACGACGCTGGGGATTCCCAGTTGCCGTGTGCCGCCCTGCGGCTTGGGAATTTCAACCGCTCGCACTGCTTGGGGCTGGTATTCACCGGCCAGTAACCTGACCTTGAGGGTTGGCCAATACTGTCTCACGTAGCCCGCCAAGT > 2:995159/1‑150 GGCGATCCACGACGCTGGGGATTCCCAGTTGCCGTGTGCCGCCCTGCGGCTTGGGAATTTCAACCGCTCGCACTGCTTGGGGCTGGTATTCACCGGCCAGTAACCTGACCTTGAGGGTTGGCCAAT > 2:2934392/1‑126 GGCGATCCACGACGCTGGGGATTCCCAGTTGCCGTGTGCCGCCCTGCGGCTTGGGAATTTCAACCGCTCGCACTGCTTGGGGCTGGTATTCACCGGCCAGTAACCTGACCTTGAGGGTTGGCCAAT < 1:2934392/126‑1 CGATCCACGACGCTGGGGATTCCCAGTTGCCGTGTGCCGCCCTGCGGCTTGGGAATTTCAACCGCTCGCACTGCTTGGGGCTGGTATTCACCGGCCAGTAACCTGACCTTGAGGGTTGGCCAATACTGTCTCACGTAGCCCGCCAAGTCA < 1:607834/150‑1 CGATCCACGACGCTGGGGATTCCCAGTTGCCGTGTGCCGCCCTGCGGCTTGGGAATTTCAACCGCTCGCACTGCTTGGGGCTGGTATTCACCGGCCAGTAACCTGACCTTGAGGGTTGGCCAATACTGTCTCACGTAGCCCGCCAAGTCA < 2:5195391/150‑1 CGATCCACGACGCTGGGGATTCCCAGTTGCCGTGTGCCGCCCTGCGGCTTGGGAATTTCAACCGCTCGCACTGCTTGGGGCTGGTATTCACCGGCCAGTAACCTGACCTTGAGGGTTGGCCAATACTGTCTCACGTAGCCCGCCAAGTCA < 2:5369084/150‑1 GATCCACGACGCTGGGGATTCCCAGTTGCCGTGTGCCGCCCTGCGGCTTGGGAATTTCAACCGCTCGCACTGCTTGGGGCTGGTATTCACCGGCCAGTAACCTGACCTTGAGGGTTGGCCAATACTGTCTCACGTAGCCCGCCAAGTCAG > 2:2411728/1‑150 GCAACAAGGGAGCACCGGGTGCCGATGGCATGACGGTCGCTGACTTGGCGGGCTACGTGAGACAGTATTGGCCAACCCTCAAGGTCAGGTTACTGGCCGGTGAATACCAGCCCCAAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1426330‑1426482‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgATCCACGACGCTGGGGATTCCCAGTTGCCGTGTGCCGCCCTGCGGCTTGGGAATTTCAACCGCTCGCACTGCTTGGGGCTGGTATTCACCGGCCAGTAACCTGACCTTGAGGGTTGGCCAATACTGTCTCACGTAGCCCGCCAAGTCAG < NC_002947/1426517‑1426369 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |