| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1531788 = | 107 (0.650) | 9 (0.070) | 6/220 | NT | 12.1% | coding (130/630 nt) | PP_1344 | hypothetical protein |
| ? | NC_002947 | 1531884 = | 43 (0.320) | coding (34/630 nt) | PP_1344 | hypothetical protein | |||||
TAGATAGGGGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1531956‑1531788‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgcgaagaggccggcacaggcaGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAG > NC_002947/1531884‑1532030 TAGATAGGGGCATTTTCACTGAGGTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGC < 2:2743938/150‑1 GATAGGGGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGA < 1:740602/150‑1 GATAGGGGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGA < 1:740592/150‑1 AGGGGCATTTTCACTGAGTTCAAGGCTTGGTAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGA < 1:168160/150‑1 AGGGGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGA < 2:1244285/150‑1 AGGGGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGA < 2:2220829/150‑1 AGGGGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGA < 1:4904569/150‑1 AGGGGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGAGGGTTCCCCCGCGAAGA < 2:1190913/150‑1 GGGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCGCCTACAAGATACACAAAAACCATGCAGGAGCGGGTTCCCCCCCGCAGAGG > 2:2552933/1‑150 CATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGATACCGATACCCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCG < 2:256246/150‑1 CATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCG < 2:256485/150‑1 TGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGGTAACCCGCTCCGACAATATACCGAAAAACCTGTCAGGAGAGGGTTCACCCGCGAAGAGGCCGGCACAGGCc > 1:1242374/1‑149 TTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCG < 1:350769/126‑1 TTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCG > 2:350769/1‑126 TTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCGAT > 1:5297699/1‑150 CCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCC > 2:402847/1‑150 CCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCC > 1:5242237/1‑150 CCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCC > 1:2825439/1‑150 CCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCC > 2:4956489/1‑150 GCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCT > 2:5011851/1‑150 TCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGC > 1:1137242/1‑150 CCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATC > 2:2293203/1‑150 CCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATC > 2:1851414/1‑150 ggtccCCCCCGCTACGGGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTTAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCTTGGAAATCCAC < 1:2533537/145‑1 CCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCC > 2:4172518/1‑150 CCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCC > 2:2370938/1‑150 CCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCC > 1:2946256/1‑150 CCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCC > 2:1698266/1‑150 CGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCT > 1:8518/1‑150 CGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCT > 1:669606/1‑150 GCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCA < 2:1010524/123‑1 GCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCA > 1:1010524/1‑123 cAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCAC < 1:616990/149‑1 GGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCG < 2:5090419/150‑1 GCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGT > 1:858208/1‑150 GCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGT > 2:1954418/1‑150 GCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGT > 1:745442/1‑150 GCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGT > 1:745088/1‑150 GCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGT > 1:5111924/1‑150 GCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGT > 1:3763251/1‑150 GCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGT > 1:2879243/1‑150 CCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTT < 2:563499/150‑1 CGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTT > 1:5405989/1‑150 CGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTT > 1:3894492/1‑150 GGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTC > 2:1233567/1‑150 GGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTC > 1:3651234/1‑150 CAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGG > 1:863673/1‑150 AGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGT > 1:5982/1‑150 GCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAG > 2:4141621/1‑150 GCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAG > 1:1949942/1‑150 TAGATAGGGGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1531956‑1531788‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgcgaagaggccggcacaggcaGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAG > NC_002947/1531884‑1532030 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |