| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1666839 | 115 (0.700) | 6 (0.040) | 4/236 | NT | 5.4% | intergenic (‑69/‑202) | PP_1460/ffh | membrane protein/signal recognition particle GTPase subunit |
| ? | NC_002947 | = 1666868 | 107 (0.740) | intergenic (‑98/‑173) | PP_1460/ffh | membrane protein/signal recognition particle GTPase subunit | |||||
TATAGGCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1666679‑1666839‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgctcccacaggATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATGTTCTCC < NC_002947/1666868‑1666720 TATAGGCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCC < 2:1436814/150‑1TATAGGCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCC < 2:1436686/150‑1 AGGCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCT < 1:913242/150‑1 GGCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTC > 2:2175056/1‑150 GGCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTC > 1:2786198/1‑150 GGCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGAATCCGCTGATCAATGAAGACTGAAGGCTTGTCTCGGGGCATTCGTGGGCACGCCCGCTC > 2:3057405/1‑150 GCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCC > 2:2286972/1‑150 GCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCC > 1:3291233/1‑150 GCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGATTGTGTCGGGGCATTCGTGGGCACGCCCGCTCC < 1:860977/150‑1 CCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCC > 1:5379861/1‑150 GGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCAC < 2:257387/150‑1 GCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACA < 1:1776687/150‑1 CTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAG < 2:4618037/150‑1 TGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGG < 2:2785356/150‑1 TGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGG < 2:4250065/150‑1 GAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGTAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTG > 1:1177694/1‑150 ACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTG < 2:1177694/150‑1 CATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCGCGCCCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGG < 1:3444984/150‑1 ATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAG > 1:1771998/1‑112 ATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAG < 2:1771998/112‑1 TAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAGGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGA < 1:4874462/150‑1 TAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGA < 1:539712/150‑1 TAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGA < 1:539709/150‑1 CCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGACTCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGA > 2:4349760/1‑150 CCGCTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGA > 1:4186450/1‑150 CTCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTT < 2:1178989/150‑1 TCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTA > 1:373123/1‑150 TCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTA < 2:4461496/150‑1 TCCCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCCTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTA > 1:4965673/1‑150 CCCACAGGATCCTCTCTACCTGCAGGCCTGCTCCATACGTGTGGGAGCGGGCGTGCCCTCGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGATTCTATGCCAATCTCCGTCTCTTTAAAGGCTCGCCAAGCAGGACTTtt < 2:3241847/150‑3 CCCACAGGATCCTCACGACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTAT < 2:2148064/150‑1 CCACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATG > 1:2932593/1‑150 CACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCCACCAGGACTTATGT > 2:145019/1‑150 CACAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATGT > 1:2164372/1‑150 CAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCA > 2:99265/1‑79 CAGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCA < 1:99265/79‑1 AGGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATGTTCT > 2:3916198/1‑150 GGATCCTCCCTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATGTTCTC < 1:1745755/150‑1 GGATCCTCACTACCTGCAGGCCTGCGCCCTACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATGTTCTC < 1:1197004/150‑1 GGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATGTTCTC < 1:4188624/150‑1 GGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATGTTCTC < 1:3637145/150‑1 GGATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATGTTCTC < 1:1745776/150‑1 GGATCCGCCCTACCGGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATGTTCTC < 1:468526/150‑1 GATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATGTTCTCC > 2:3887549/1‑150 GATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTAT > 2:2531525/1‑143 GATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTAT < 1:2531525/143‑1 TATAGGCCGGCTGCGATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1666679‑1666839‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgctcccacaggATCCTCACTACCTGCAGGCCTGCGCCATACCTGTGGGAGCGGGCGTGCCCACGAATGCCCCGACACAAGCCTTCAGTCTTCCTTGATCAGCGGAATCTATGCCAAACTCCGTCTCTTTAAAGGCTCGCCAACCAGGACTTATGTTCTCC < NC_002947/1666868‑1666720 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |