New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1899258	150 (0.910)	19 (0.120)	7/248	NT	13.8%	intergenic (+286/‑234)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
	?	NC_002947	= 1899320	99 (0.650)					intergenic (+348/‑172)	PP_t18/PP_1703	tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase

CTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1899100‑1899258 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaTGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGCACAGGTTACGCACCATGCGGTGGCAACCTCATGCTCCCAGGCGCTTTGCTGGGGCAATTTCCAGCAT  <  NC_002947/1899320‑1899173                                                                                                                                                                                                                                                                                                                     CTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCT                                                                                                                                                               <  1:4447187/150‑1  TTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTT                                                                                                                                                              >  1:3945020/1‑150  TTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTT                                                                                                                                                              >  2:2365853/1‑150   TCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTC                                                                                                                                                             >  1:2524092/1‑150   TCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTC                                                                                                                                                             >  1:2524325/1‑150   TCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTC                                                                                                                                                             <  1:4876201/150‑1     CCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGC                                                                                                                                                           >  2:5127039/1‑150     CCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGC                                                                                                                                                           <  2:4859781/150‑1       GCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGG                                                                                                                                                         >  2:2522807/1‑150       GCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGG                                                                                                                                                         <  2:592133/150‑1       GCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGG                                                                                                                                                         >  2:3087654/1‑150                GCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCCTTTCGCGGGCATGCCCG                                                                                                                                                >  2:3110885/1‑150                    CTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCGTGCCCGCgaa                                                                                                                                            <  2:602176/150‑4                    CTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCGTGCCCGCgaa                                                                                                                                            <  2:602169/150‑4                       AAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCCTTTCGCGGGCATGCCCGCTCCCAC                                                                                                                                         <  1:3110885/150‑1                                           GCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGATATCGCAAGGCCTGA                                                                                                                     >  2:2476208/1‑150                                                TCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCG                                                                                                                >  2:2983645/1‑150                                                           GGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCT                                                                                                     <  1:4165044/150‑1                                                           GGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCT                                                                                                     <  1:4164910/150‑1                                                             GAGGGCAGTGCTCAGGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGT                                                                                                   <  2:428282/150‑1                                                               GGGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGG                                                                                                 <  1:2476208/150‑1                                                                GGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGG                                                                                                <  1:1345713/150‑1                                                                 GCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCGGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCGCGTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGA                                                                                               <  1:4748872/150‑1                                                                 GCAGTGCTCAGGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGA                                                                                               <  1:4864440/150‑1                                                                   AGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGC                                                                                             <  1:2983645/150‑1                                                                     TGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGG                                                                                           <  1:5344665/150‑1                                                                                                             ATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGC                                                                                             <  2:2545190/108‑1                                                                                                             ATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGC                                                                                             <  2:2545266/108‑1                                                                                                             ATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGC                                                                                             >  1:2545266/1‑108                                                                                                             ATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGC                                                                                             >  1:2545190/1‑108                                                                                                                                                         GCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGCACAGGTTACGCACCATGCGGTGGCAACCTCATGCTCCCAGGCGCTTTGCTGGGGCAATTTCC       <  2:3008096/150‑1                                                                                                                                                          CGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGCACAGGTTACGCACCATGCGGTGGCAACCTCATGCTCCCAGGCGCTTTGCTGGGGCAATTTCCA      <  1:4507002/150‑1                                                                                                                                                          CGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGCACAGGTTACGCACCATGCGGTGGCAACCTCATGCTCCCAGGCGCTTTGCTGGGGCAATTTCCA      <  2:5430983/150‑1                                                                                                                                                           GGGCATGCCCGCTCCCACCGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGCACAGGTT                                                              >  1:1271785/1‑93                                                                                                                                                           GGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGCACAGGTT                                                              <  2:1271785/93‑1                                                                                                                                                              CATGCCCGCTCCCACAGGGATATCGCAAGGCCTGCGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGCACAGGTTACGCACCATGCGGTGGCAACCTCATGCTCCCAGGCGCTTTGCTGGGGCAATTTCCAGCAT  <  2:2403822/150‑1                                                                                                                                                                                                                                                                                                                     CTTCCCGCAGCGTCAGCACCTCAAACCCGTCCTCGATCACCGGCATCTCCTGGGACATGGGAGGGCAGTGCTCATGCTGGAAATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1899100‑1899258 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaTGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGCACAGGTTACGCACCATGCGGTGGCAACCTCATGCTCCCAGGCGCTTTGCTGGGGCAATTTCCAGCAT  <  NC_002947/1899320‑1899173

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.