| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2505627 | 148 (0.900) | 8 (0.050) | 5/242 | NT | 5.6% | intergenic (+21/‑212) | speB/PP_2197 | agmatinase/hypothetical protein |
| ? | NC_002947 | = 2505689 | 137 (0.920) | intergenic (+83/‑150) | speB/PP_2197 | agmatinase/hypothetical protein | |||||
ATCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2505466‑2505627‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccattcgcgggcGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCATCTCCATGGCCAGGGTTG < NC_002947/2505689‑2505542 ATCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGG > 1:1194501/1‑150ATCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGG > 1:996737/1‑150ATCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGG < 2:365978/150‑1ATCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGG > 2:4449875/1‑150 TCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGATGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGGAGATTTTGCGGC > 2:4960697/1‑150 AACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCA > 1:1631248/1‑150 ACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCAT > 2:4519577/1‑150 ACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCAT > 2:1870660/1‑150 ACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCAGGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACACCGGCCAGTAGATTTTGCGGCCAT > 2:1870628/1‑150 GTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCG < 2:1128908/150‑1 GTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCG < 1:5156480/150‑1 TAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGG < 2:2446528/150‑1 TAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGG < 1:4259054/150‑1 GGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGC < 1:2072535/150‑1 TTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGG < 2:5343009/139‑1 TTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGG > 1:5343009/1‑139 TGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGCTTGCCCGCga < 1:1209590/150‑3 GGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGCTTGCCCGCgaatgg < 1:5031190/150‑7 GGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGCTTGCCCGCgaatgg < 1:3566161/150‑7 GCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTG < 2:594492/150‑1 TGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGA < 1:2673503/150‑1 TGGAGATGCTGTGCCTGTATGCGGCGCGGCACACGGTGGACAACGGCCAGTAGATTTTGCAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCC < 2:2018732/150‑1 TGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACACCGGCCAGTAGATTTTGCGGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCC < 1:5032554/140‑1 TGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCC > 2:5032554/1‑140 GCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCATCTCCAT < 2:3295778/150‑1 GCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCATCTCCAT > 2:5044161/1‑150 GCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAAACTAATGGCCGTTGTCCACCATGTGCCGCGCCGCATACCGGCACAGCATCTCCAT > 1:132600/1‑150 CCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCATCTCCATG < 2:2124675/150‑1 CCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCATCTCCATG < 1:1234271/150‑1 CATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCATCTCCATGG < 1:2325557/150‑1 TTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCATCTCCATGGCC > 1:2276152/1‑150 TCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCATCTCCATGGCCA < 2:1096054/150‑1 cggGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCATCTCCATGGCCAG < 1:4572077/147‑1 GCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCATCTCCATGGCCAGG > 1:1313610/1‑150 GCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCATCTCCATGGCCAGG < 1:2962013/150‑1 GCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCTTTG < 1:2889517/98‑1 GCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCTTTG > 2:2889517/1‑98 GCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCATCTCCATGGCCAGGGTTG < 2:1975704/150‑1 GCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGC < 2:338038/131‑1 GCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGC > 1:338038/1‑131 ATCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2505466‑2505627‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccattcgcgggcGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCATCTCCATGGCCAGGGTTG < NC_002947/2505689‑2505542 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |