| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2959109 = | 85 (0.520) | 11 (0.070) +C |
8/266 | NT | 11.0% | intergenic (+99/‑97) | PP_2588/PP_2589 | class III aminotransferase/aldehyde dehydrogenase family protein |
| ? | NC_002947 | 6062425 = | 95 (0.580) | intergenic (+83/+98) | PP_5311/PP_5312 | signal transduction protein/hypothetical protein | |||||
AGGTAGAGGTCCGAGGCGCGTTGTTGCCAGAATTCGAGAGTGTACATTTGTACTCCAAACGACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2959252‑2959109‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCA > NC_002947/6062425‑6062480 | AGGTAGAGGTCCGAGGCGCGTTGTTGCCAGAATTCGAGAGTGTACATTTGTACTCCAAACGACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACG‑CG‑‑CTTCC‑CTGTGGGAGCGGGCACGCCCGCGAA < 2:60733/150‑1AGGTAGAGGTCCGAGGCGCGTTGTTGCCAGAATTCGAGAGTGTACATTTGTACTCCAAACGACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACG‑CG‑‑CTTCC‑CTGTGGGAGCGGGCACGCCCGCGAA < 2:60753/150‑1AGGTAGAGGTCCGAGGCGCGTTGTTGCCAGAATTCGAGAGTGTACATTTGTACTCCAAACGACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACG‑CG‑‑CTTCC‑CTGTGGGAGCGGGCACGCCCGCGAA < 2:60764/150‑1 GAGAGTGTACATTTGTACTCCAAACGACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCCCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTC < 1:5236121/150‑1 CATTTGTACTCCAAACGACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTC < 2:3913505/150‑1 TTGTACTCCAAACGACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCG < 2:42318/150‑1 TGTACTCCAAACGACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGG < 1:3728625/150‑1 TTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGG < 1:3773999/121‑1 TTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCACGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGG > 2:3773999/1‑121 GCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCA > 1:2965509/1‑117 GCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCA < 2:2965509/117‑1 | AGGTAGAGGTCCGAGGCGCGTTGTTGCCAGAATTCGAGAGTGTACATTTGTACTCCAAACGACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTACCACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2959252‑2959109‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCA > NC_002947/6062425‑6062480 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |