| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3363055 = | 109 (0.660) | 6 (0.040) | 5/248 | NT | 5.7% | coding (177/1581 nt) | PP_2956 | ribosomal protein S6 modification protein‑like protein |
| ? | NC_002947 | 3363098 = | 96 (0.630) | coding (134/1581 nt) | PP_2956 | ribosomal protein S6 modification protein‑like protein | |||||
AACGTGGCCGAAGTATTGGCCAAAACCGAAGTTTCCACAATAACCCTCTCCGAGGAGCCACCCAGTAAGCGGAGCGCCGGTAACCGCTTGCTGATCGTGGTGGAGCGCAAGGAAGACTGGGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3363213‑3363055‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcccagTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGTGGAAACTTCGGTTTTGGCCAATACTTCGGCCACGTTGGCTTGCACCGCTGACATGAGTATTCGATCCCT > NC_002947/3363098‑3363246 AACGTGGCCGAAGTATTGGCCAAAACCGAAGTTTCCACAATAACCCTCTCCGAGGAGCCACCCAGTAAGCGGAGCGCCGGTAACCGCTTGCTGATCGTGGTGGAGCGCAAGGAAGACTGGGCCAGCTACTTTCCCAGCGAGAGCCTGATG > 2:3241156/1‑150 TGGCCGAAGTATTGGCCAAAACCGAAGTTTCCACAATAACCCTCTCCGAGGAGCCACCCAGTAAGCGGAGCGCCGGTAACCGCTAGCTGATCGTGGTGGAGCGCAAGGAAGACTGGGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGG < 1:5032294/150‑1 CGAAGTATTGGCCAAAACCGAAGTTTCCACAATAACCCTCTCCGAGGAGCCACCCAGTAAGCGGAGCGCCGGTAACCGCTTGCTGATCGTGGTGGAGCGCAAGGAAGACTGGGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCA < 2:4718862/150‑1 CGAAGTATTGGCCAAAACCGAAGTTTCCACAATAACCCTCTCCGAGGAGCCACCCAGTAAGCGGAGCGCCGGTAACCGCTTGCTGATCGTGGTGGAGCGCAAGGAAGACTGGGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCA > 1:2197760/1‑150 CGAAGTATTGGCCAAAACCGAAGTTTCCACAATAACCCTCTCCGAGGAGCCACCCAGTAAGCGGAGCGCCGGTAACCGCTTGCTGATCGTGGTGGAGCGCAAGGAAGACTGGGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCA > 1:538001/1‑150 GAAGTATTGGCCAAAACCGAAGTTTCCACAATAACCCTCTCCGAGGAGCCACCCAGTAAGCGGAGCGCCGGTAACCGCTTGCTGATCGTGGTGGAGCGCAAGGAAGACTGGGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCAG > 2:3841618/1‑150 GAAGTATTGGCCAAAACCGAAGTTTCCACAATAACCCTCTCCGAGGAGCCACCCAGTAAGCGGAGCGCCGGTAACCGCTTGCTGATCGTGGTGGAGCGCAAGGAAGACTGGGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCAG > 1:4650781/1‑150 GAAGTATTGGCCAAAACCGAAGTTTCCACAATAACCCTCTCCGAGGAGCCACCCAGTAAGCGGAGCGCCGGTAACCGCTTGCTGATCGTGGTGGAGCGCAAGGAAGACTGGGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCAG > 1:99915/1‑150 GAAGTATTGGCCAAAACCGAAGTTTCCACAATAACCCTCTCCGAGGAGCCACCCAGTAAGCGGAGCGCCGGTAACCGCTTGCTGATCGTGGTGGAGCGCAAGGAAGACTGGGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCAG > 1:970903/1‑150 CACAATAACCCTCTCCGAGGAGCCACCCAGTAAGCGGAGCGCCGGTAACCGCTTGCTGATCGTGGTGGAGCGCAAGGAAGACTGGGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCAG > 1:1803532/1‑124 CACAATAACCCTCTCCGAGGAGCCACCCAGTAAGCGGAGCGCCGGTAACCGCTTGCTGATCGTGGTGGAGCGCAAGGAAGACTGGGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCAG < 2:1803532/124‑1 AAGGAAGACTGGGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGTGGAAACTTCGGTTTTGGCC > 2:1057430/1‑150 TGGGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGTGGAAACTTCGGTTTTGGCCAATACTTCG > 1:5350732/1‑150 TGGGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGTGGAAACTTCGGTTTTGGCCAATACTTCG > 1:5301388/1‑150 GGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGTGGAAACTTCGGTTTTGGCCAATACTTCGGC > 2:4670088/1‑150 GCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGT < 1:2177677/119‑1 GCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGT > 2:2177677/1‑119 GCTGGCCCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGTGGAAACTTCGG < 2:1025517/101‑1 GCTGGCCCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGTGGAAACTTCGG > 1:1025517/1‑101 TGGCCCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGTGGAAACTTCGGTTTTGGCCAATACTTCGGCCACGTTGGCTTGCACCGCTGACATGAGTATTC < 1:4354294/150‑1 GCCCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGTGGAAACTTCGGTTTTGGCCAATACTTCGGCCACGTTGGCTTGCACCGCTGACATGAGTATTCGA < 1:1883278/150‑1 CCCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGTGGAAACTTCGGTTTTGGCCAATACTTCGGCCACGTTGGCTTGCACCGCTGACATGAGTATTCGAT > 2:2501538/1‑150 CCCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGTGGAAACTTCGGTTTTGGCCAATACTTCGGCCACGTTGGCTTGCACCGCTGACATGAGTATTCGAT > 2:2501517/1‑150 CCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGTGGAAACTTCGGTTTTGGCCAATACTTCGGCCACGTTGGCTTGCACCGCTGACATGAGTATTCGATC > 2:4323585/1‑150 CCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGTGGAAACTTCGGTTTTGGCCAATACTTCGGCCACGTTGGCTTGCACCGCTGACATGAGTATTCGATC > 2:4712401/1‑150 GTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGTGGAAACTTCGGTTTTGGCCAATACTTCGGCCACGTTGGCTTGCACCGCTGACATGAGTATTCGATCCCT < 2:5301388/150‑1 AACGTGGCCGAAGTATTGGCCAAAACCGAAGTTTCCACAATAACCCTCTCCGAGGAGCCACCCAGTAAGCGGAGCGCCGGTAACCGCTTGCTGATCGTGGTGGAGCGCAAGGAAGACTGGGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3363213‑3363055‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcccagTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGTGGAAACTTCGGTTTTGGCCAATACTTCGGCCACGTTGGCTTGCACCGCTGACATGAGTATTCGATCCCT > NC_002947/3363098‑3363246 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |