| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4161035 = | 104 (0.630) | 17 (0.110) | 12/242 | NT | 14.7% | intergenic (+17/‑192) | PP_3661/PP_3662 | membrane protein/hypothetical protein |
| ? | NC_002947 | 4161123 = | 103 (0.690) | intergenic (+105/‑104) | PP_3661/PP_3662 | membrane protein/hypothetical protein | |||||
TTCTTTGACACCACCATACCGAGAAATGTGGACGGCAACGAGGGGGGCTGTGAAAAACCTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4161196‑4161035‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcgaagcagGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAGCCCCAAAG > NC_002947/4161123‑4161269 TTCTTTGACACCACCATACCGAGAAATGTGGACGGCAACGAGGGGGGCTGTGAAAAACCTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTCCAGGGGCCTTGCCGTCTGCAGGGCAGCACCCACCTGTAGGAGCGGGTTTA > 1:4585753/1‑150TTCTTTGACACCACCATACCGAGAAATGTGGACGGCAACGAGGGGGGCTGTGAAAAACCTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCCGCACCCACCTGTAGGAGCGGGTTTA > 2:5138645/1‑150TTCTTTGACACCACCATACCGAGAAATGTGGACGGCAACGAGGGGGGCTGTGAAAAACCTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTA < 1:793749/150‑1TTCTTTGACACCACCATACCGAGAAATGTGGACGGCAACGAGGGGGGCTGTGAAAAACCTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTA < 1:4690278/150‑1TTCTTTGACACCACCATACCGAGAAATGTGGACGGCAACGAGGGGGGCTGTGAAAAACCTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTA < 1:4150787/150‑1TTCTTTGACACCACCATACCGAGAAATGTGGACGGCAACGAGGGGGGCTGTGAAAAACCTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTA > 1:3641449/1‑150 aCTTTGACACCACCATACCGAGAAATGTGGACGGCAACGAGGGGGGCTGTGAAAAACCTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTAC < 2:4377485/149‑1 TCTTTGACACCACCATACCGAGAAATGTGGACGGCAACGAGGGGGGCTGTGAAAAACCTTGAGACCGAGCTGCCTTCTTCTAGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGTGTTTAC < 2:644251/150‑1 TCTTTGACACCACCATACCGAGAAATGTGGACGGCAACGAGGGGGGCTGTGAAAAACCTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTAC < 2:1308863/150‑1 TTGACACCACCATACCGAGAAATGTGGACGGCAACGAGGGGGGCTGTGAAAAACCTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCG < 2:3677394/150‑1 TTGACACCACCATACCGAGAAATGTGGACGGCAACGAGGGGGGCTGTGAAAAACCTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCG > 2:1745915/1‑150 ACACCACCATACCGAGAAATGTGGACGGCAACGAGGGGGGCTGTGAAAAACCTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGA > 2:564627/1‑150 CACCACCATACCGAGAAATGTGGACGGCAACGAGGGGGGCTGTGAAAAACCTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAA < 1:2160379/150‑1 ACCACCATACCGAGAAATGTGGACGGCAACGAGGGGGGCTGTGAAAAACCTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCGGTAGGAGCGGGTTTACCCGCGAAG > 1:3959286/1‑150 ACCACCATACCGAGAAATGTGGACGGCAACGAGGGGGGCTGTGAAAAACCTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGGCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTAACCGCGAAG > 2:1981440/1‑150 ACCATACCGAGAAATGTGGACGGCAACGAGGGGGGCTGTGAAAAACCTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAG > 1:2683234/1‑150 TTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCGTGCCGTCTGCAGGGCAGCACCCACCTGGAGGAGCGGGTTTACCCGCGAAGCAGCCGACTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCAC > 1:867300/1‑150 TTGAGACCGAGATGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAA > 1:3545438/1‑99 TTGAGACCGAGATGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAA < 2:3545438/99‑1 GCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCGGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGG > 1:2537878/1‑150 GCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCGGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGG > 1:2537883/1‑150 GTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGCCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAA < 1:704609/148‑1 GTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGCCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAA > 2:704609/1‑148 CCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATG > 1:4575473/1‑150 CCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAA < 1:4438132/145‑1 CCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAA > 2:4438132/1‑145 CCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCGAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATG > 2:1775225/1‑150 CCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGGAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATG > 2:4938835/1‑150 GCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTCTGGTGGTGTCAAAGAAGGATGTT > 2:168530/1‑150 TCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTT > 2:815010/1‑150 CTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTAC > 1:3149925/1‑150 CTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTAC > 2:4584390/1‑150 TACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACC > 2:1364475/1‑150 GGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCAC > 2:4433151/1‑150 TCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGA < 1:1364475/150‑1 gaACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCG > 2:2297592/3‑150 gaACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCG > 2:2297406/3‑150 ACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTC > 2:3887630/1‑150 ACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTC > 1:5393834/1‑150 CCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCA < 1:3299895/150‑1 CCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAG > 2:1271954/1‑150 CGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAGC > 1:210794/1‑150 GAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAGCCCC > 2:376656/1‑150 GAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAGCCCC > 2:742492/1‑150 GCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAGCCCCAAA < 2:3795494/150‑1 GCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAGCCCCAAA < 2:4093101/150‑1 CAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAGCCCCAAAG > 1:3906374/1‑150 TTCTTTGACACCACCATACCGAGAAATGTGGACGGCAACGAGGGGGGCTGTGAAAAACCTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4161196‑4161035‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcgaagcagGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAGCCCCAAAG > NC_002947/4161123‑4161269 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |