| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4813820 | 138 (0.840) | 11 (0.080) | 4/238 | NT | 7.4% | coding (97/324 nt) | PP_4238 | hypothetical protein |
| ? | NC_002947 | = 4813880 | 152 (1.040) | coding (157/324 nt) | PP_4238 | hypothetical protein | |||||
GCAACCTGCAAAGCCAGCAAGGGGCACCACGGCCGGAGATGCTTGGGAAGATTCTGGGCAAGCGCTAGTGCATGTGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4813657‑4813820‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacggCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGTCGCCTGCTTCACGGCGCTCGATCTGTGCCCCAC < NC_002947/4813880‑4813733 GCAACCTGCAAAGCCAGCAAGGGGCACCACGGCCGGAGATGCTTGGGAAGATTCTGGGCAAGCGCTAGTGCATGTGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGA > 2:5107567/1‑150GCAACCTGCAAAGCCAGCAAGGGGCACCACGGCCGGAGATGCTTGGGAAGATTCTGGGCAAGCGCTAGTGCATGTGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGA > 2:5107148/1‑150GCAACCTGCAAAGCCAGCAAGGGGCACCACGGCCGGAGATGCTGGGGAAGATTCTGGGCACGCGCTAGTGCATGGGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGA > 1:104329/1‑150 CAACCTGCAAAGCCAGCAAGGGGCACCACGGCCGGAGATGCTTGGGAAGATTCTGGGCAAGCGCTAGTGCATGTGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAA > 2:93338/1‑150 aaaCTGCAAAGCCAGCAAGGGGCACCACGGCCGGAGATGCTTGGGAAGATTCTGGGCAAGCGCTAGTGCATGTGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAAC > 1:2929671/4‑150 AACCTGCAAAGCCAGCAAGGGGCACCACGGCCGGAGATGCTTGGGAAGATTCTGGGCAAGCGCTAGTGCATGTGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAAC < 1:1587909/150‑1 AACCTGCAAAGCCAGCAAGGGGCACCACGGCCGGAGATGCTTGGGAAGATTCTGGGCAAGCGCTAGTGCATGTGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAAC > 2:1118629/1‑150 ACCTGCAAAGCCAGCAAGGGGCACCACGGCCGGAGATGCTTGGGAAGATTCTGGGCAAGCGCTAGTGCATGTGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACC > 1:5272047/1‑150 TGCAAAGCCAGCAAGGGGCACCACGGCCGGAGATGCTTGGGACGATTCTGGGCAAGCGCTAGTGCATGTGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCCTGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGC > 2:2756560/1‑150 GCAAAGCCAGCAAGGGGCACCACGGCCGGAGATGCTTGGGAAGATTCTGGGCAAGCGCTAGTGCATGTGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCT < 1:4716193/150‑1 GCAAAGCCAGCAAGGGGCACCACGGCCGGAGATGCTTGGGAAGATTCTGGGCAAGCGCTAGTGCATGTGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCT > 1:2703198/1‑150 AAGCCAGCAAGGGGCACCACGGCCGGAGATGCTTGGGAAGATTCTGGGCAAGCGCTAGTGCATGTGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCT > 1:852292/1‑150 CCAGCAAGGGGCACCACGGCCGGAGATGCTTGGGAAGATTCTGGGCAAGCGCTAGTGCATGTGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACG < 2:2929671/150‑1 ACCACGGCCGGAGATGCTTGGGAAGATTCTGGGCAAGCGCTAGTGCATGTGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGCCGACCGCGCA > 1:2319022/1‑150 ACCACGGCCGGAGATGCTTGGGAAGATTCTGGGCAAGCGCTAGTGCATGTGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGCCGACCGCGCA > 1:2319026/1‑150 GAAGATTCTGGGCAAGCGCTAGTGCATGTGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTAAACCCGCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTG > 1:1939131/1‑150 GTGCATGTGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTAAACCCGCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGC > 2:2332381/1‑150 ATGTGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGA < 2:2319026/150‑1 ATGTGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGA < 2:2319022/150‑1 GATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGG < 1:2243767/150‑1 GATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGG < 2:1821051/150‑1 ATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGG < 1:3895442/150‑1 ATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTAAACCCGCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGG < 2:1939131/150‑1 ATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTAAACCCGCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGG < 1:2332381/150‑1 ACCCGCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGTCGCCTGCTTCACGGCGCTCGA < 2:626202/150‑1 ACCCGCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGTCGCCTGCTTCACGGCGCTCGA < 1:3295242/150‑1 CCCGCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGTCGCCTGCTTCACGGCGCTCGAT < 2:787088/150‑1 CCCGCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGTCGCCTGCTTCACGGCGCTCGAT > 2:3793835/1‑150 CCGCTCCTCCGGCCGACCGCGCAGGCCTTGCGATCCCGGGCCTGGCGCAAAACCCAGCCGGTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGGCGCCGGCTGCACGGCGCGCGAgc > 2:4784798/1‑148 CCGCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGTCGCCTGCTTCACGGCGCTCGATC > 1:58572/1‑150 CCGCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGTCGCCTGCTTCACGGCGCTCGATC > 2:5272047/1‑150 CCGCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGTCGCCTGCTTCACGGCGCTCGATC > 1:3517785/1‑150 CCGCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGTCGCCTGCTTCACGGCGCTCGATC > 1:3621698/1‑150 CCGCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGTCGCCTGCTTCACGGCGCTCGATC > 1:4734192/1‑150 CCGCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGTCGCCTGCTTCACGGCGCTCGATC > 1:58568/1‑150 CCGCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGTCGCCTGC > 2:3269933/1‑134 CCGCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGTCGCCTGC < 1:3269933/134‑1 GCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGTCGCCTGCTTCACGGCGCTCGATCTG > 1:326698/1‑150 GCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGT < 2:3518522/125‑1 GCTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGT > 1:3518522/1‑125 CTCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGTCGCCTGCTTCACGGCGCTCGATCTGT < 2:1338610/150‑1 TCCTCCGGCCGACCGCGCAGGCCTAGCGATCACGGGACTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGGGCCATGCCCCACGTCGCCTGATTCACGGCGCTCGATCTGTG > 2:5026099/1‑150 TCCTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGTCGCCTGCTTCACGGCGCTCGATCTGTG > 2:4411225/1‑150 CTACGGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGTCGCCTGCTTCACGGCGCTCGATCTGTGCC > 2:1065541/1‑150 GGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGTCGCCTGCTTCACGGCGCTCGATCTGTGCCCCAC > 1:3303175/1‑150 GGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGTCGCCTGCTTCACGGCGCTCGATCTGTGCCCCAC > 2:3786825/1‑150 GGCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGTCGCCTGCTTCACGGCGCTCGATCTGTGCCCCAC > 2:382180/1‑150 GCAACCTGCAAAGCCAGCAAGGGGCACCACGGCCGGAGATGCTTGGGAAGATTCTGGGCAAGCGCTAGTGCATGTGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4813657‑4813820‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacggCCGACCGCGCAGGCCTTGCGATCACGGGCCTGGCGCAAAACCCAGCCGTTAGCGCGAGCCCCGTAGGAGCGGGTTCACCCGCGAACACCGGCGTAGCCGGTGCCATGCCCCACGTCGCCTGCTTCACGGCGCTCGATCTGTGCCCCAC < NC_002947/4813880‑4813733 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |