New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4862103 | 176 (1.070) | 10 (0.070) | 9/246 | NT | 5.7% | coding (914/2331 nt) | ligA | DNA ligase |
? | NC_002947 | = 4862127 | 169 (1.120) | coding (890/2331 nt) | ligA | DNA ligase |
TTGTGCAGGGTGGCGTTGGACACCGTCACACCGGCCACCTTGACCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4861944‑4862103 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccagcgcgAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTGCCCACAAGTTCCCGGCCATGGAAGAGCTGACCGAGGTGCTGGATGTCGAGTTCCAGGTTGGCCGTACGGGTGCAGTAACGCCTGTGGCGCGGCTGAAGCCGGTCAAGGTG < NC_002947/4862127‑4861979 TTGTGCAGGGTGGCGTTGGACACCGTCACACCGGCCACCTTGACCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATC < 2:713036/150‑1 TGTGCAGGGTGGCGTTGGACACCGTCACACCGGCCACCTTGACCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCG < 2:3944538/150‑1 GTGCAGGGTGGCGTTGGACACCGTCACACCGGCCACCTTGACCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGC < 2:1156428/150‑1 GTGCAGGGTGGCGTTGGACACCGTCACACCGGCCACCTTGACCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGC < 2:1156421/150‑1 GGGTGGCGTTGGACACCGTCACACCGGCCACCTTGACCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGC < 1:2121409/150‑1 GCGTTGGACACCGTCACACCGGCCACCTTGACCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCGATTGCCCAcaagttc < 2:2802719/150‑8 CCGTCACACCGGCCACCTTGACCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGAGCTGGGCTTCC < 2:3781364/150‑1 CTTGACCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCG > 2:3630391/1‑150 GACCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTG < 1:3393890/150‑1 ACCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGG < 1:3237672/150‑1 CCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGG < 1:3804069/150‑1 CCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTGCCAGGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGG < 2:2944888/150‑1 CGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGC < 1:2898326/150‑1 GCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGA < 1:3630391/150‑1 TTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAACCGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATT < 2:5356975/150‑1 TCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTG < 1:1930376/150‑1 gaaGCCCAGCTCGCGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTGCCCACAAGTTCCCGGCCATGGAAGAGCTGACCGAGGTGCTGGATGTCGAGTTCCAGGTTGGCCGTACGGGTGCAGTAACGCCTGTGGCGCGGCTGAAG > 1:4631869/4‑150 CGCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTGCCCACAAGTTCCCGGCCATGGAAGAGCTGACCGAGGTGCTGGATGTCGAGTTCCAGGTTGGCCGTACGGGTGCAGTAACGCCTGTGGCGCGGCTGAAGCC > 1:5256756/1‑150 GCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTGCCCACAAGTTCCCGGCCATGGAAGAGCTGACCGAGGTGCTGGATGTCGAGTTCCAGGTTGGCCGTACGGGTGCAGTAACGCCTGTGGCGCGGCTGAAGCCG < 1:5237701/150‑1 GCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTGCCCACAAGTTCCCGGCCATGGAAGAGCTGACCGAGGTGCTGGATGTCGAGTTCCAGGTTGGCCGTACGGGTGCAGTAACGCCTGTGGCGCGGCTGAAGCCG < 1:3214669/150‑1 GCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTGCCCACAAGTTCCCGGCCATGGAAGAGCTGACCGAGGTGCTGGATGTCGAGTTCCAGGTTGGCCGTACGGGTGCAGTAACGCCTGTGGCGCGGCTGAAGCCG < 1:3214589/150‑1 GCCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTGCCCACAAGTTCCCGGCCATGGAAGAGCTGACCGAGGTGCTGGATGTCGAGTTCCAGGTTGGCCGTACGGGTGCAGTAACGCCTGTGGCGCGGCTGAAGCCG < 1:5237486/150‑1 CCCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTGCCCACAAGTTCCCGGCCATGGAATAGCTGACCGAGGTGCTGGATGTCGATTTCCAGGTTGGCCGTACGTGTGCAGTAACGCCTGTGGCGCGGCTGAAGCCGG < 1:4735779/150‑1 CCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTGCCCACAAGTTCCCGGCCATGGAAGAGCTGACCGAGGTGCTGGATGTCGAGTTCCAGGTTGGCCGTACGGGTGCAGTAACGCCTGTGGCGCGGCTGAAGCCGGT > 2:4703799/1‑150 CCAGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTGCCCACAAGTTCCCGGCCATGGAAGAGCTGACCGAGGTGCTGGATGTCGAGTTCCAGGGTGGCCGTACGGGTGCAGTAACGCCTGTGGCGCGGCTGAAGCCGGT > 2:3105212/1‑150 AGCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTGCCCACAAGTTCCCGGCCATGGAAGAGCTGACCGAGGTGCTGGATGTCGAGTTCCAGGTTGGCCGTACGGGTGCAGTAACGCCTGTGGCGCGGCTGAAGCCGGTCA > 1:501928/1‑150 GCGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTGCCCACAAGTTCCCGGCCATGGAAGAGCTGACCGAGGTGCTGGATGTCGAGTTCCAGGTTGGCCGTACGGGTGCAGTAACGCCTGTGGCGCGGCTGAAGCCGGTCAA < 1:858356/150‑1 CGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTGCCCACAAGTTCCCGGCCATGGAAGAGCTGACCGAGGTGCTGGATGTCGAGTTCCAGGTTGGCCGTACGGGTGCAGTAACGCCTGTGGCGCGGCTGAAGCCGGTCAAG < 1:4822568/150‑1 CGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTGCCCACAAGTTCCCGGCCATGGAAGAGCTGACCGAGGTGCTGGATGTCGAGTTCCAGGTTGGCCGTACGGGTGCAGTAACGCCTGTGGCGCGGCTGAAGCCGGTCAAG < 1:4703799/150‑1 CGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTGCCCACAAGTTCCCGGCCATGGAAGAGCTGACCGAGGTGCTGGATGTCGAGTTCCAGGTTGGCCGTACGGGTGCAGTAACGCCTGTGGCGCGGCTGAAGCCGGTCAAG < 2:1800257/150‑1 CGCGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTGCCCACAAGTTCCCGGCCATGGAAGAGCTGACCGAGGTGCTGGATGTCGAGTTCCAGGTTGGCCGTACGGGTGCAGTAACGCCTGTGGCGCGGCTGAAGCCGGTCAAG < 2:4879449/150‑1 CGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTGCCCACAAGTTCCCGGCCATGGAAGAGCTGACCGAGGTGCTGGATGTCGAGTTCCAGGTTGGCCGTACGGGTGCAGTAACGCCTGTGGCGCGGCTGAAGCCGGTCAAGGT < 2:3079071/150‑1 CGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTGCCCACAAGTTCCCGGCCATGGAAGAGCTGACCGAGGTGCTGGATGTCGAGTTCCAGGTTGGCCGTACGGGTGCAGTAACGCCTGTGGCGCGGCTGAAGCCGGTCAAGGT < 1:4788383/150‑1 CGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTGCCCACAAGTTCCCGGCCATGGAAGAGCTGACCGAGGTGCTGGATGTCGAGTTCCAGGTTGGCCGTACGGGTGCAGTAACGCCTGTGGCGCGGCTGAAGCCGGTCAAGGT < 2:4943601/150‑1 CGAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTGCCCACAAGTTCCCGGCCATGGAAGAGCTGACCGAGGTGCTGGATGTCGAGTTCCAGGTTGGCCGTACGGGTGCAGTAACGCCTGTGGCGCGGCTGAAGCCGGTCAAGGT < 2:4943683/150‑1 GAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTGCCCACAAGTTCCCGGCCATGGAAGAGCTGACCGAGGTGCTGGATGTCGAGTTCCAGGTTGGCCGTACGGGTGCAGTAACGCCTGTGGCGCGGCTGAAGCCGGTCAAGGTG < 1:4459734/150‑1 TTGTGCAGGGTGGCGTTGGACACCGTCACACCGGCCACCTTGACCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4861944‑4862103 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccagcgcgAGCTGGGCTTCCGCGCCCGTGAGCCGCGCTGGGCGATTGCCCACAAGTTCCCGGCCATGGAAGAGCTGACCGAGGTGCTGGATGTCGAGTTCCAGGTTGGCCGTACGGGTGCAGTAACGCCTGTGGCGCGGCTGAAGCCGGTCAAGGTG < NC_002947/4862127‑4861979 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |