| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5207143 | 148 (0.900) | 20 (0.130) | 12/260 | NT | 11.4% | intergenic (+64/+51) | PP_4585/PP_4586 | TrmH family RNA methyltransferase/hypothetical protein |
| ? | NC_002947 | = 5207189 | 167 (1.050) | intergenic (+110/+5) | PP_4585/PP_4586 | TrmH family RNA methyltransferase/hypothetical protein | |||||
GCATGAACCTGGCGGCGACGGTGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5206991‑5207143‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACAGGCCCAAGGCATCCCTGGCGCCTGTCCCGGCCTTTGACAGCCCAAGCTTCGCCGCACGGCCTTGTTATTTGAACTTGGGCCCTGAGCGGGTATTCAGCCCTTT < NC_002947/5207189‑5207041 GCATGAACCTGGCGGCGACGGTGAATGTGGTGTTGTATGACCGCCTGGCCACAGGGCGGAAGACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTGGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGG < 2:998009/150‑1GCATGAACCTGGCGGCGACGGTGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGCATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGG < 2:5449014/150‑1GCATGAACCTGGCGGCGACGGTGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGG < 1:1584697/150‑1GCATGAACCTGGCGGCGACGGTGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGG < 2:445181/150‑1GCATGAACCTGGCGGCGACGGTGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGG < 2:445174/150‑1GCATGAACCTGGCGGCGACGGTGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGG < 1:30556/150‑1GCATGAACCTGGCGGCGACGGTGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGG < 1:30673/150‑1GCATGAACCTGGCGGCGACGGTGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGG < 2:3282527/150‑1GCATGAACCTGGCGGCGACGGTGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGG < 2:1518814/150‑1 CGGCGACGGTGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGTCCGTATGAAA < 2:4841911/150‑1 CGGCGACGGTGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGTCCGTATGAAA < 2:4841758/150‑1 TGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCCGTATGAAAAGCCTTGCCTGACCTTCG > 1:363447/1‑150 GTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGG < 2:4407947/119‑1 GTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGG > 1:4407947/1‑119 CGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTT < 2:1380332/150‑1 CGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTT < 1:2393042/150‑1 GCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTT < 1:4900701/150‑1 GCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTT < 1:4900711/150‑1 GCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTT < 1:5346465/150‑1 GCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTT < 2:2435996/150‑1 CATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTT < 1:2362076/150‑1 cTGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAACTTCAAATAACAAGCCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTC < 1:1980361/149‑1 ATGGCCTAAGTGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCATAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTC < 1:1980102/150‑1 CCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATAC < 1:1088924/150‑1 CAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACA < 1:438193/150‑1 AGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACAGGC < 2:1527582/150‑1 GAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACAGGCCCAAGG < 2:363447/150‑1 TCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTT > 1:3849377/1‑75 TCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCCTGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTT < 2:3849377/75‑1 GCCGGGACAGGCGCCAGGGATGCCTTGGGCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACAGGC < 2:1717217/80‑1 GCCGGGACAGGCGCCAGGGATGCCTTGGGCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACAGGC > 1:1717217/1‑80 GGCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACAGGCCCAAGGCATCCCTGGCGCCTGTCCCGGCCTTTGACAGCCCAAGCTTCGCCGCACGGCCTTGTTATTTGAACTTGGGCCCTGAGCGGGTATTCAGCCC > 2:3845/1‑150 GCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACAGGCCCAAGGCATCCCTGGCGCCTGTCCCGGCCTTTGACAGCCCAAGCTTCGCCGCACGGCCTTGTTATTTGAACTTGGGCCCTGAGCGGGTATTCAGCCCT > 2:1617709/1‑150 GCCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACAGGCCCAAGGCATCCCTGGCGCCTGTCCCGGCCTTTGACAGCCCAAGCTTCGCCGCACGGCCTTGTTATTTGAACTTGGGCCCTGAGCGGGTATTCAGCCCT > 2:1877643/1‑150 CCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACAGGCCCAAGGCATCCCTGGCGCCTGTCCCGGCCTTTGACAGCCCAAGCTTCGCCGCACGGCCTTGTTATTTGAACTTGGGCCCTGAGCGGGTATTCAGCCCTT > 1:1324087/1‑150 CCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACAGGCCCAAGGCATCCCTGGCGCCTGTCCCGGCCTTTGACAGCCCAAGCTTCGCCGCACGGCCTTGTTATTTGAACTTGGGCCCTGAGCGGGTATTCAGCCCTT > 1:1324139/1‑150 CCCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACAGGCCCAAGGCATCCCTGGCGCCTGTCCCGGCCTTTGACAGCCCAAGCTTCGCCGCACGGCCTTGTTATTTGAACTTGGGCCCTGAGCGGGTATTCAGCCCTT > 1:4144013/1‑150 CCGTTTGAAAAGCCTTGCCTGTCCTTCGTCTCAAGGCTTTTCATACAGGCCCAAGGCTTCCCTGGCGCCTGTCCCGGCCTTTGACAGCCCAAGCTTCGCCGCACGGACTTGTTATTTGAACTTGGGCCCTGAGCGGGTATTCAGCCCTTT < 2:1800918/150‑1 CCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACAGGCCCAAGGCATCCCTGGCGCCTGTCCCGGCCTTTGACAGCCCAAGCTTCGCCGCACGGCCTTGTTATTTGAACTTGGGCCCTGAGCGGGTATTCAGCCCTTT < 1:798476/150‑1 CCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACAGGCCCAAGGCATCCCTGGCGCCTGTCCCGGCCTTTGACAGCCCAAGCTTCGCCGCACGGCCTTGTTATTTGAACTTGGGCCCTGAGCGGGTATTCAGCCCTTT < 2:733702/150‑1 GCATGAACCTGGCGGCGACGGTGAATGTGGTGTTGTATGACCGCATGGCCAAAGGGCTGAATACCCGCTCAGGGCCCAAGTTCAAATAACAAGGCCGTGCGGCGAAGCTTGGGCTGTCAAAGGCCGGGACAGGCGCCAGGGATGCCTTGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5206991‑5207143‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccCGTATGAAAAGCCTTGCCTGACCTTCGTCTCAAGGCTTTTCATACAGGCCCAAGGCATCCCTGGCGCCTGTCCCGGCCTTTGACAGCCCAAGCTTCGCCGCACGGCCTTGTTATTTGAACTTGGGCCCTGAGCGGGTATTCAGCCCTTT < NC_002947/5207189‑5207041 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |