| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5212189 = | 132 (0.800) | 10 (0.070) | 6/236 | NT | 9.1% | intergenic (‑85/+93) | rnd/PP_4592 | ribonuclease D/metal dependent hydrolase |
| ? | NC_002947 | 5212280 = | 84 (0.580) | intergenic (‑176/+2) | rnd/PP_4592 | ribonuclease D/metal dependent hydrolase | |||||
ATACCGAGCTCTACCAGCAGTCGCTGGACATGTTTGCCGGTTGCCGGCCTTGGCTGGCGGCCAAGCGCTGAAGCCCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5212352‑5212189‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagggCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGAGCCGTGCCAGG > NC_002947/5212280‑5212426 ATACCGAGCTCTACCAGCAGTCGCTGGACATGTTTGCCGGTTGCCGGCCTTGGCTGGCGGCCAAGCGCTGAAGCCCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGC < 2:3501618/150‑1 CCGAGCTCTACCAGCAGTCGCTGGACATGTTTGCCGGTTGCCGGCCTTGGCTGGCGGCCAAGCGCTGAAGCCCTGTGGGAGCGGGCACGCCCGCGTAACCGGGCAAAACAGGGCCATACACCGTGTTTGCTTCATTCTCGGGGGGGCCCG > 1:4375673/1‑150 CCGAGCTCTACCAGCAGTCGCTGGACATGTTTGCCGGTTGCCGGCCTTGGCTGGCGGCCAAGCGCTGAAGCCCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCG > 2:3175073/1‑150 AGCTCTACCAGCAGTCGCTGGACATGTTTGCCGGTTGCCGGCCTTGGCTGGCGGCCAAGCGCTGAAGCCCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTC < 1:2313888/150‑1 ctCCAGCAGTCGCTGGACATGTTTGCCGGTTGCCGGCCTTGGCTGGCGGCCAAGCGCTGAAGCCCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACA < 1:213977/148‑1 TACCAGCAGTCGCTGGACATGTTTGCCGGTTGCCGGCCTTGGCTGGCGGCCAAGCGCTGAAGCCCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACA < 1:5332651/150‑1 CAGCAGTCGCTGGACATGTTTGCCGGTTGCCGGCCTTGGCTGGCGGCCAAGCGCTGAAGCCCTGTGGGAGCGGGCACGCCCGCGAACCCCGGCAAAACCGGGCCAAAAACCGGGTTGCCTTCATTCGCGGGCGCGCCCCCACCCACAcag > 2:213977/1‑147 gCTTGGCCGCCAGCCAAGCGCTGAAGCCCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGC > 2:1799244/2‑107 gCTTGGCCGCCAGCCAAGCGCTGAAGCCCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGC < 1:1799244/106‑1 GGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGT > 2:1129680/1‑150 GCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTAT > 1:304028/1‑150 GCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTAT > 2:3656083/1‑150 CGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTCGAGCTCGGTATGTA > 1:3419183/1‑150 CGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTA > 1:328718/1‑150 GCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTAC > 2:2768342/1‑150 CCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACC > 2:4249850/1‑150 GGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCC > 1:2697066/1‑150 GGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCC > 1:5421091/1‑150 GCGGGCGGGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAACCCTGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCACGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGG < 1:1982492/150‑1 GCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCT < 2:3267545/150‑1 CCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGACCAGGTTGTCCTGGGACAGCGGGGCATCGCTGA > 1:2447025/1‑150 CCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGA < 2:991111/150‑1 CCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGA < 2:4848118/150‑1 CCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGA < 1:1017021/150‑1 CCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGA > 2:2616540/1‑150 CCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGA < 1:1340942/150‑1 CCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGA > 1:1173128/1‑150 CCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACAGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACATGTTGTCCTGGGACAGCGGGGCATCGCTGA < 2:4650135/150‑1 GCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGAGC < 1:1467969/150‑1 ACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGAGCCGTGCC > 2:4837952/1‑150 AGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCCACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGAGCCGTGCCAG > 1:5063336/1‑150 AGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGAGCCGTGCCAG > 1:868252/1‑150 AGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGAGCCGTGCCAG > 1:4256176/1‑150 AGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGG < 1:4966583/130‑1 AGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGG > 2:4966583/1‑130 GGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGAGCCGTGCCAGG > 2:3291446/1‑150 GGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGAGCCGTGCCAGG < 1:3162398/150‑1 ATACCGAGCTCTACCAGCAGTCGCTGGACATGTTTGCCGGTTGCCGGCCTTGGCTGGCGGCCAAGCGCTGAAGCCCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5212352‑5212189‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagggCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTATGTACCTGCAACAGGCCAAGCATCGAGTGGAACAGGTTGTCCTGGGACAGCGGGGCATCGCTGAGCCGTGCCAGG > NC_002947/5212280‑5212426 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |