| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5503401 | 102 (0.620) | 9 (0.060) | 7/236 | NT | 9.1% | intergenic (+42/‑177) | PP_4834/PP_4835 | SPFH domain‑containing protein/hypothetical protein |
| ? | NC_002947 | = 5503447 | 89 (0.610) | intergenic (+88/‑131) | PP_4834/PP_4835 | SPFH domain‑containing protein/hypothetical protein | |||||
GGGCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5503239‑5503401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgcgacacaaggccGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGATAGGGGCGCAAAGCGCCCCCGACACTCTCAAATCTTGTTGCGGCCCATCAACCCGCGCACGGTCTCTTGCAGGTCAGCCGGCAACACC < NC_002947/5503447‑5503299 GGGCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATC < 1:3021311/150‑1 GGCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCG > 2:2004589/1‑150 GCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGt > 2:666626/1‑149 GCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCGTTGCGCCCCAATCGC > 2:1560220/1‑150 GAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGA < 2:4657410/150‑1 CTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAA < 2:1289290/150‑1 TATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCAAAAGCGACACAAG > 2:9612/1‑150 TATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGGTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAG < 1:1680724/150‑1 TGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGC < 1:4514949/150‑1 GTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC < 2:1577193/150‑1 GGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGT < 1:4369904/150‑1 CTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCCATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCG < 2:4802756/150‑1 TGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGC < 1:2197044/150‑1 CTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATTGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGATA < 2:4874421/150‑1 AAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGATAG > 1:3280537/1‑147 AAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGATAG > 1:3280443/1‑147 AAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGATAG < 2:3280443/147‑1 AAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGATAG < 2:3280537/147‑1 CCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCCATCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGATAGGGGCGCAAA < 2:253397/150‑1 cccTCGCGACACCCGGCCGCTCCCACCGAATTGCGGCAGCCTCGAATACTGCGCTGGCCTGTGGGGCCTTGTGTCGCGATAGGGGCGCAACGCGCCCCCGACACTCTCAAATCTTGTTGCGGCCCATCAACCCGCGCACGGTCTCTTGCA < 2:2522560/147‑1 cagCGCGACCCACGGCCGCCCCCACAGAATGGCGGCAGCCTCGAATACTGCGCTGTCGTGGGGGGCCTTGTGTCGCGATTGGGGCGCAACGCGCCCCCGACACTCTCAAATCTTGTTGCGGCCCATCAAACCGCGCACGGTCTCTTGCAG < 2:3830699/147‑1 ATCGCGACACCTGCCCGCTCCAACTGAATGGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGATTGGGGCGAAAAGCGCCCCCGACACTCTCAAATCTTGTTGCGGCCCATCAACCCGCGCACGGTCTCTTGCAGG < 2:3722364/150‑1 TCGCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGATAGGGGCGCAAAGCGCCCCCGACACTCTCAAATCTTGTTGCGGCCCATCAACCCGCGCACGGTCTCTTGCAGGT > 1:2004589/1‑150 GCGACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGATAGGGGCGCAAAGCGCCCCCGACACTCTCAAATCTTGTTGCGGCCCATCAACCCGCGCACGGTCTCTTGCAGGTCA > 2:3457443/1‑150 GACACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGATAGGGGCGCAAAGCGCCCCCGACACTCTCAAATCTTGTTGCGGCCCATCAACCCGCGCACGGTCTCTTGCAGGTCAGC > 2:3880206/1‑150 ACAAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGATAGGGGCGCAAAGCGCCCCCGACACTCTCAAATCTTGTTGCGGCCCATCAACCCGCGCACGGTCTCTTGCAGGTCAGCCGG > 2:1806790/1‑150 AAGGCCGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGATAGGGGCGCAAAGCGCCCCCGACACTCTCAAATCTTGTTGCGGCCCATCAACCCGCGCACGGTCTCTTGCAGGTCAGCCGGCA > 1:3900506/1‑150 CGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGATAGGGGCGCAAAGCGCCCCCGACACTCTCAAATCTTGTTGCGGCCCATCAACCCGCGCACGGTCTCTTGCAGGTCAGCCGGCAACACC > 2:2798469/1‑150 GGGCGAACGCTATGTGGGCGCGATGGAGAACCTCGCGGGGAGCAGCAATGCCAAGGTGGTGGTGTTGCCGGCTGACCTGCAAGAGACCGTGCGCGGGTTGATGGGCCGCAACAAGATTTGAGAGTGTCGGGGGCGCTTTGCGCCCCTATCGCGACACAAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5503239‑5503401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgcgacacaaggccGCTCCCACAGAATTGCGGCAGCCTCGAATACTGCGCTGTCCTGTGGGGCCTTGTGTCGCGATAGGGGCGCAAAGCGCCCCCGACACTCTCAAATCTTGTTGCGGCCCATCAACCCGCGCACGGTCTCTTGCAGGTCAGCCGGCAACACC < NC_002947/5503447‑5503299 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |