| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5970388 = | 82 (0.500) | 5 (0.040) | 5/224 | NT | 8.0% | coding (162/360 nt) | PP_5723 | hypothetical protein |
| ? | NC_002947 | 5970492 = | 47 (0.340) | coding (58/360 nt) | PP_5723 | hypothetical protein | |||||
AACGGAGAAATGGCCGCCAGTGTAGCACGCACAAACCTGGCGCCTGAGTGCACATTGGCCTTTGTGTGCGGCCTTGCGTCGCGATTGGGCTGCACAGCGGCCCCGGCAATATCAGCATCAAGGCACAAATCTTGGGGGGCGCTTCGCACCCCAATCGCGACGCAAGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5970558‑5970388‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccaatcgcgacgcaaggccgcACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGCCTCGCGCCTGTTCAGCAGCGAT > NC_002947/5970492‑5970639 AACGGAGAAATGGCCGCCAGTGTAGCACGCACAAACCTGGCGCCTGAGTGCACATTGGCCTTTGTGTGCGGCCTTGCGTCGCGATTGGGCTGCACAGCGGCCCCGGCAATATCAGCATCAAGGCACAAATCTTGGGGGGCGCTTCGCACC < 2:2715772/150‑1 GGAGAAATGGCCGCCAGTGTAGCACGCACAAACCTGGCGCCTGAGTGCACATTGGCCTTTGTGTGCGGCCTTGCGTCGCGATTGGGCTGCACAGCGGCCCCGGCAATATCAGCATCAAGGCACAAATCTTGGGGGGCGCTTCGCACCCCA > 2:2677487/1‑150 GAGAAATGGCCGCCAGTGTAGCACGCACAAACCTGGCGCCTGAGTGCACATTGGCCTTTGTGTGCGGCCTTGCGGCGCGATGGGGGGGCACCGCCGCCCCGGCCCAATCAGCATCAAGGCCCAAATCTGGGGGGGGGCGTCGCACCCCca > 2:3636846/1‑148 GAAATGGCCGCCAGTGTAGCACGCACAAACCTGGCGCCTGAGTGCACATTGGCCTTTGTGTGCGGCCTTGCGTCGCGATTGGGCTGCACAGCGGCCCCGGCAATATCAGCATCAAGGCACAAATATTGGGGTGCGAAGCGCCCCCCAAga < 1:2409741/150‑3 GAAATGGCCGCCAGTGTAGCACGCACAAACCTGGCGCCTGAGTGCACATTGGCCTTTGTGTGCGGCCTTGCGTCGCGATTGGGCTGCACAGCGGCCCCGGCAATATCAGCATCAAGGCACAAATATTGGGGTGCGAAGCGCCCCCCAAga < 1:2626292/150‑3 ATGGCCGCCAGTGTAGCACGCACAAACCTGGCGCCTGAGTGCACATTGGCCTTTGTGTGCGGCCTTGTGTCGCGATTGGGCTGCACAGCGGCCCCGGCAATATCAGCATCAAGGCACAAATCTTGGGGGGCGCTTCGCACCCCAATCGCG > 2:373950/1‑150 TGGCCGCCAGTGTAGCACGCACAAACCTGGCGCCTGAGTGCACATTGGCCTTTGTGTGCGGCCTTGCGTCGCGATTGGGCTGCACAGCGGCCCCGGCAATATCAGCATCAAGGCACAAATCTTGGGGGGCGCTTCGCACCCCAATCGCGA < 1:2605031/150‑1 TGGCCGCCAGTGTAGCACGCACAAACCTGGCGCCTGAGTGCACATTGGCCTTTGTGTGCGGCCTTGCGTCGCGATTGGGCTGCACAGCGGCCCCGGCAATATCAGCATCAAGGCACAAATCTTGGGGGGCGCTTCGCACCCCAATCGCGA < 1:3179800/150‑1 GGCCGCCAGTGTAGCACGCACAAACCTGGCGCCTGAGTGCACATTGGCCTTTGTGTGCGGCCTTGCGTCGCGATTGGGCTGCACAGCGGCCCCGGCAATATCAGCATCAAGGCACAAATCTTGGGGGGCGCTTCGCACCCCAATCGCGAC < 2:169782/150‑1 GGCCGCCAGTGTAGCACGCACAAACCTGGCGCCTGAGTGCACATTGGCCTTTGTGTGCGGCCTTGCGTCGCGATTGGGCTGCACAGCGGCCCCGGCAATATCAGCATCAAGGCACAAATCTTGGGGGGCGCTTCGCACCCCAATCGCGAC < 1:2677487/150‑1 CAGTGTAGCACGCACAAACCTGGCGCCTGCGTGCACATTGGCCTTTGTGTGCGGCCTTGCGTCGCGATTGGGCTGCACAGCGGCCCCGGCAATATCAGCATCAAGGCACAAATCTTGGGGGGCGCTTCGCACCCCAATCGCGACGCAAGG < 2:3655638/150‑1 TCGCGATTGGGCTGCACAGCGGCCCCGGCAATATCAGCATCAAGGCACAAATCTTGGGGGGCGCTTCGCACCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCA > 1:3262159/1‑150 CGCGATTGGGCTGCACAGCGGCCCCGGCAATATCAGCATCAAGGCACAAATCTTGGGGGGCGCTTCGCACCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCAT > 1:2403109/1‑150 GCGATTGGGCTGCACAGCGGCCCCGGCAATATCAGCATCAAGGCACAAATCTTGGGGGGCGCTTCGCACCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATT > 2:3216980/1‑150 ATTGGGCTGCACAGCGGCCCCGGCAATATCAGCATCAAGGCACAAATCTTGGGGGGCGCTTCGCACCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCT > 2:547393/1‑150 CTTCGCACCCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGA > 2:274491/1‑150 CCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGCCT > 2:3831287/1‑150 CCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAG < 2:56346/146‑1 CCCAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAG > 1:56346/1‑146 CAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGCCTCG > 2:4329101/1‑150 CAATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTATCGATGCCCTGAGCGACCAGGCCACG > 2:1942271/1‑150 AATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGCCTCGC > 2:3383057/1‑150 ATCGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGCCTCGCG > 1:1902255/1‑150 CGCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGCGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGCCTCGCGCC < 2:5331730/150‑1 GCGACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGCCTCGCGCCT > 1:2582687/1‑150 GACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTCTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCA < 1:4680535/108‑1 GACGCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTCTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCA > 2:4680535/1‑108 GCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGCCTCGCGCCTGTTCA > 1:3358734/1‑150 GCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGCCTCGCGCCTGTTCA > 2:3450630/1‑150 GCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGCCTCGCGCCTGTTCA < 2:1829907/150‑1 GCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGCCTCGCGCCTGTTCA > 1:4254830/1‑150 GCAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGCCTCGCGCCTGTTCA > 2:109137/1‑150 CAAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGCCTCGCGCCTGTTCAG < 1:3689221/150‑1 AAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGCCTCGCGCCTGTTCAGC < 1:2683466/150‑1 AAGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGACCTTCTCGATGCCCTGAGCGACCAGGCCTCGCGCCTGTTCAGC > 1:2522646/1‑150 AGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGCCTCGCGCCTGTTCAGCA < 1:2928367/150‑1 AGGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGCCTCGCGCCTGTTCAGCA < 1:2599710/150‑1 GGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGCCTCGCGCCTGTTCgctca < 1:533391/150‑6 GGCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGCCTCGCGCCTGTTCAGCAG > 2:495795/1‑150 GCCGCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGCCTCGCGCCTGTTCAGCAGC > 1:4241677/1‑150 GCACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGCCTCGCGCCTGTTCAGCAGCGAT > 1:2910362/1‑150 AACGGAGAAATGGCCGCCAGTGTAGCACGCACAAACCTGGCGCCTGAGTGCACATTGGCCTTTGTGTGCGGCCTTGCGTCGCGATTGGGCTGCACAGCGGCCCCGGCAATATCAGCATCAAGGCACAAATCTTGGGGGGCGCTTCGCACCCCAATCGCGACGCAAGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5970558‑5970388‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccaatcgcgacgcaaggccgcACACAAAGGCCAATGTGCACTCAGGCGCCAGGTTTGTGCGTGCTACACTGGCGGCCATTTCTCCGTTTCAGTGGACAGCCCCATGCTCGCGCCCAAAGCCCTTCTCGATGCCCTGAGCGACCAGGCCTCGCGCCTGTTCAGCAGCGAT > NC_002947/5970492‑5970639 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |