New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6037052 =	223 (1.360)	3 (0.020)	3/260	NT	1.4%	coding (180/456 nt)	dut	deoxyuridine 5'‑triphosphate nucleotidohydrolase
	?	NC_002947	6037088 =	212 (1.330)					coding (216/456 nt)	dut	deoxyuridine 5'‑triphosphate nucleotidohydrolase
Rejected: Frequency below/above cutoff threshold.

GCGATGGTGAACGGCGTGTTGCCGCGGTTCCAGCACGACACCATCAGCTCGCCCTGGTAGTCCGAATCGATCAGGCCGACCAGGTTGCCCAGCACGATGCCGTGTTTATGGCCCAGGCCCGAGCGCGGCAGGATGACTGCCGCCAGGCCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6037204‑6037052 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggCCTGGGCCATAAACACGGCATCGTGCTGGGCAACCTGGTCGGCCTGATCGATTCGGACTACCAGGGCGAGCTGATGGTGTCGTGCTGGAACCGCGGCAACACGCCGTTCACCATCGCGGTTGGCGAGCGCATCGCCCAGCTGGTGCTGG  >  NC_002947/6037088‑6037236                                                                                                                                                                                                                                                                                                                GCGATGGTGAACGGCGTGTTGCCGCGGTTCCAGCACGACACCATCAGCTCGCCCTGGTAGTCCGAATCGATCAGGCCGACCAGGTTGCCCAGCACGATGCCGTGTTTATGGCCCAGGCCCGAGCGCGGCAGGATGACTGCCGCCAGGCCC                                                                                                                                                          >  1:4689761/1‑150  CGATGGTGAACGGCGTGTTGCCGCGGTTCCAGCACGACACCATCAGCTCGCCCTGGTAGTCCGAATCGATCAGGCCGACCAGGTTGCCCAGCACGATGCCGTGTTTATGGCCCAGGCCCGAGCGCGGCAGGATGACTGCCGCCAGGCCCG                                                                                                                                                         <  1:4030504/150‑1   GATGGTGAACGGCGTGTTGCCGCGGTTCCAGCACGACACCATCAGCTCGCCCTGGTAGTCCGAATCGATCAGGCCGACCAGGTTGCCCAGCACGATGCCGTGTTTATGGCCCAGGCCCGAGCGCGGCAGGATGACTGCCGCCAGGCCCGG                                                                                                                                                        <  1:162602/150‑1   GATGGTGAACGGCGTGTTGCCGCGGTTCCAGCACGACACCATCAGCTCGCCCTGGTAGTCCGAATCGATCAGGCCGACCAGGTTGCCCAGCACGATGCCGTGTTTATGGCCCAGGCCCGAGCGCGGCAGGATGACTGCCGCCAGGCCCGG                                                                                                                                                        <  1:560880/150‑1   GATGGTGAACGGCGTGTTGCCGCGGTTCCAGCACGACACCATCAGCTCGCCCTGGTAGTCCGAATCGATCAGGCCGACCAGGTTGCCCAGCACGATGCCGTGTTTATGGCCCAGGCCCGAGCGCGGCAGGATGACTGCCGCCAGGCCCGG                                                                                                                                                        <  1:163845/150‑1    ATGGTGAACGGCGTGTTGCCGCGGTTCCAGCACGACACCATCAGCTCGCCCTGGTAGTCCGAATCGATCAGGCCGACCAGGTTGCCCAGCACGATGCCGTGTTTATGGCCCAGGCCCGAGCGCGGCAGGATGACTGCCGCCAGGCCCGGG                                                                                                                                                       <  1:747409/150‑1                                                                                                     CGTGTTTATGGCCCAGGCCCGAGCGCGGCAGGATGACTGCCGCCAGGCCCGGGCCTGGGCCATAAACACGGCATCGTGCTGGGCAACCTGGTCGGCCTGATCGATTCGGACTACCAGGGCGAGCTGATGGTGTCGTCCTGGAACCGCGGC                                                      >  1:4632372/1‑150                                                                                                                         GAGCGCGGCAGGATGACTGCCGCCAGGCCCGGGCCTGGGCCATAAACACGGCATCGTGCTGGGCAACCTGGTCGGCCTGATCGATTC                                                                                                 <  1:1434462/87‑1                                                                                                                         GAGCGCGGCAGGATGACTGCCGCCAGGCCCGGGCCTGGGCCATAAACACGGCATCGTGCTGGGCAACCTGGTCGGCCTGATCGATTC                                                                                                 >  2:1434462/1‑87                                                                                                                                                  GGCCCGGGCCTGGGCCATAAACACGGCATCGTGCTGGGCAACCTGGTCGGCCTGATCGATTCGGACTACCAGGGCGAGCTGATGGTGTCGTCCTGGAACCGCGGCAACACGCCGTTCACCATCGCGGTTGGCGAGCGCATCGCCCAGCTG         <  2:4632372/150‑1                                                                                                                                                      CGGGCCTGGGGCATAAACCCGGCCTCGTGCCGGGCAACCCGGTCGGCCGGATCGATTCGGAATAACAGGGCGCGCTGTTTGTGTCGTTCTGGCACCGGGGCAACACGCCGTTCACCATCGCGGTTGGCGAGCGCATCGCCCAGCTGGTGC     <  1:2402040/150‑1                                                                                                                                                      CGGGCCTGGGCCATAAACACGGCATCGTTCTGGGCAACCTGGTCGGCCTGATCGATTCGGACTACCAGGGCGAGCTGATGGTGTCGTGCTGGAACCGCGGCAACACGCCGTTCACCATCGCGGTTGGCGAGCGCATCGCCCAGCTGGTGC     >  2:4392180/1‑150                                                                                                                                                      CGGGCCTGGGCCATAAACACGGCATCGTGCTGGGCAACCTGGTCGGCCTGATCGATTCGGACTACCAGGGCGAGCTGATGGTGTCGTGCTGGAACCGCGGCAACTCGCCGTTCACCATCGAGGTTGGCGAGCGCATCGCCCAGCTGGTGC     <  1:2402356/150‑1                                                                                                                                                       GGGCCTGGGCCATAAACACGGCATCGTGCTGGGCAACCTGGTCGGCCTGATCGATTCGGACTACCAGGGCGAGCTGATGGTGTCGTGCTGGAACCGCGGCAACACGCCGTTCACCATCGCGGTTGGCGAGCGCATCGCCCAGCTGGTGCT    >  2:3531135/1‑150                                                                                                                                                        GGCCTGGGCCATAAACACGGCATCGTGCTGGGCAACCTGGTCGGCCTGATCGATTCGGACTACCAGGGCGAGCTGATGGTGTCGTGCTGGAACCGCGGCAACACGCCGTTCACCATCGCGGTTGGCGAGCGCATCGCCCAGCTGGTGCTG   <  1:1866006/150‑1                                                                                                                                                         GCCTGGGCCATAAACACGGCATCGTGCTGGGCAACCTGGTCGGCCTGATCGATTCGGACTACCAGGGCGAGCTGATGGTGTCGTGCTGGAACCGCGGCAACACGCCGTTCACCATCGCGGTTGGCGAGCGCATCGCCCAGCTGGTGCTGG  <  2:3721123/150‑1                                                                                                                                                         GCCTGGGCCATAAACACGGCATCGTGCTGGGCAACCTGGTCGGCCTGATCGATTCGGACTACCAGGGCGAGCTGATGGTGTCGTGCTGGAACCGCGGCAACACGCCGTTCACCATCGCGGTTGGCGAGCGCATCGCCCAGCTGGTGCTGG  >  2:3861239/1‑150                                                                                                                                                         GCCTGGGCCATAAACACGGCATCGTGCTGGGCAACCTGGTCGGCCTGATCGATTCGGACTACCAGGGCGAGCTGATGGTGTCGTGCTGGAACCGCGGCAACACGCCGTTCACCATCGCGGTTGGCGAGCGCATCGCCCAGCTGGTGCTGG  >  2:3980156/1‑150                                                                                                                                                                                                                                                                                                                GCGATGGTGAACGGCGTGTTGCCGCGGTTCCAGCACGACACCATCAGCTCGCCCTGGTAGTCCGAATCGATCAGGCCGACCAGGTTGCCCAGCACGATGCCGTGTTTATGGCCCAGGCCCGAGCGCGGCAGGATGACTGCCGCCAGGCCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6037204‑6037052 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggCCTGGGCCATAAACACGGCATCGTGCTGGGCAACCTGGTCGGCCTGATCGATTCGGACTACCAGGGCGAGCTGATGGTGTCGTGCTGGAACCGCGGCAACACGCCGTTCACCATCGCGGTTGGCGAGCGCATCGCCCAGCTGGTGCTGG  >  NC_002947/6037088‑6037236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.