| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6054428 | 213 (1.290) | 10 (0.060) | 6/258 | NT | 4.7% | intergenic (+11/+159) | PP_5304/PP_5305 | lipoprotein/epimerase/dehydratase‑like protein |
| ? | NC_002947 | = 6054523 | 203 (1.280) | intergenic (+106/+64) | PP_5304/PP_5305 | lipoprotein/epimerase/dehydratase‑like protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCGCAACCAGCGTGGTGCACCGTTCATCATCAAGCGCGATGGTGACAAGCTGGAGATTTTCCAGGCAGTGAACCGTGCACAGCCGGATGAAATGCCAGAGCTGGCAGCGGGCAAGCGTCAGTGGACGCTGGAGCGCAGCTGAGATGATGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6054276‑6054428‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgATCCCTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTCTTCTTCGCGGGTAAACCCGATCCTACAGGGACCGCGCATCATCTCAGCTGCGCTCCAGCGTCCACTGACGCTTGCCCGCTGCCA < NC_002947/6054523‑6054377 GCGCAACCAGCGTGGTGCACCGTTCATCATCAAGCGCGATGGTGACAAGCTGGAGATTTTCCAGGCAGTGAACCGTGCACAGCCGGATGAAATGCCAGAGCTGGCAGCGGGCAAGCGTCAGTGGACGCTGGAGCGCAGCTGAGATGATGC > 2:551193/1‑150GCGCAACCAGCGTGGTGCACCGTTCATCATCAAGCGCGATGGTGACAAGCTGGAGATTTTCCAGGCAGTGAACCGTGCACAGCCGGATGAAATGCCAGAGCTGGCAGCGGGCAAGCGTCAGTGGACGCTGGAGCGCAGCTGAGATGATGC > 1:4324764/1‑150 AGGCAGTGAACCGTGCACAGCCGGATGAAATGCCAGAGCTGGCAGCGGGCAAGCGTCAGTGGACGCTGGAGCGCAGCTGAGATGATGCGCGGTCCCTGTAGGATCGGGCTTGCCCGCGAACACGGGCTTCGCCCGTGttc < 2:158860/140‑4 AGGCAGTGAACCGTGCACAGCCGGATGAAATGCCAGAGCTGGCAGCGGGCAAGCGTCAGTGGACGCTGGAGCGCAGCTGAGATGATGCGCGGTCCCTGTAGGATCGGGCTTGCCCGCGAACACGGGCTTCGCCCGTGttc > 1:158860/1‑137 CCGGATGAAATGCCAGAGCTGGCAGCGGGCAAGCGTCAGTGGACGCTGGAGCGCAGCTGAGATGATGCGCGGTCCCTGTAGGATCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTCTTCTTCGCGGGTAAAC < 2:3820605/150‑1 CGGATGAAATGCCAGAGCTGGCAGCGGGCAAGCGTCAGTGGACGCTGGAGCGCAGCTGAGATGATGCGCGATCCCTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTCTTCTTCGCGGGTAAACC < 2:2284140/150‑1 GATGAAATGCCAGAGCTGGCAGCGGGCAAGCGTCAGTGGACGCTGGAGCGCAGCTGAGATGATGCGCGATCCCTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTCTTCTTCGCGGGTAAACCCG > 1:4791143/1‑150 GAAATGCCAGAGCTGGCAGCGGGCAAGCGTCAGTGGACGCTGGAGCGCAGCTGAGATGATGCGCGGTCCCTGTAGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTCTTCTTCGCGGGTAAACCCGATC < 2:4868248/150‑1 GCCAGAGCTGGCAGCGGGCAAGCGTCAGTGGACGCTGGAGCGCAGCTGAGATGATGCGCGATCCCTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTCTTCTTCGCGGGTAAACCCGATCCTACA < 1:2708945/150‑1 CAGAGCTGGCAGCGGGCAAGCGTCAGTGGACGCTGGAGCGCAGCTGAGATGATGCGCGATCCCTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTCTTCTTCGCGGGTAAACCCGATCCTACAGG < 2:4791143/150‑1 TGGCAGCGGGCAAGCGTCAGTGGACGCTGGAGCGCAGCTGAGATGATGCGCGATCCCTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTCTTCTTCGCGGGTAAACCCGATCCTACAGGGACCGC < 2:1295424/150‑1 AGCTGAGATGATGCGCGATCCCTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTCTTCTTCGCGGGTAAACCCGATCCTACAGGGACCGCGCATCATCTCAGCTGCGCTCCAGCGTCCACTGACG > 1:1602036/1‑150 GCGCGATCCCTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTCTTCTTCGCGGGTAAACCCGATCCTACAGGGACCGCGCATCATCTCAGCTGCGCTCCAGCGTCCACTGACGCTTGCCCGCTGC < 1:2939095/150‑1 CGCGATCCCTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTCTTCTTCGCGGGTAAACCCGATCCTACAGGGACCGCGCATCATCTCAGCTGCGCTCCAGCGTCCACTGACGCTTGCCCGCTGCC < 1:4508262/150‑1 CGCGATCCCTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTCTTCTTCGCGGGTAAACCCGATCCTACAGGGACCGCGCATCATCTCAGCTGCGCTCCAGCGTCCACTGACGCTTGCCCGCTGCC < 1:2724138/150‑1 GCGATCCCTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTCTTCTTCGCGGGTAAACCCGATCCTACAGGGACCGCGCATCATCTCAGCTGCGCTCCAGCGTCCACTGACGCTTGCCCGCTGCCA > 1:705366/1‑150 GCGATCCCTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGGGCCATCCACCGCGGTGTCTTCTTCGCGGGTAAACCCGATCCTACAGGGACCGCGCATCATCTCAGCTGCGCTCCAGCGTCCACTGACGCTTGCCCGCTGCCA > 1:4785386/1‑150 GCGCAACCAGCGTGGTGCACCGTTCATCATCAAGCGCGATGGTGACAAGCTGGAGATTTTCCAGGCAGTGAACCGTGCACAGCCGGATGAAATGCCAGAGCTGGCAGCGGGCAAGCGTCAGTGGACGCTGGAGCGCAGCTGAGATGATGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6054276‑6054428‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgATCCCTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTCTTCTTCGCGGGTAAACCCGATCCTACAGGGACCGCGCATCATCTCAGCTGCGCTCCAGCGTCCACTGACGCTTGCCCGCTGCCA < NC_002947/6054523‑6054377 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |