| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6089565 | 130 (0.790) | 11 (0.070) | 7/240 | NT | 8.2% | intergenic (+38/‑192) | oruR/aphA | ornithine utilization transcriptional regulator/acetylpolyamine aminohydrolase |
| ? | NC_002947 | = 6089599 | 130 (0.880) | intergenic (+72/‑158) | oruR/aphA | ornithine utilization transcriptional regulator/acetylpolyamine aminohydrolase | |||||
CTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6089405‑6089565‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacaATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTCTCACTGAAC < NC_002947/6089599‑6089452 CTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAAC < 2:3638657/150‑1 TGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACC > 1:3439044/1‑150 GCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCG > 2:1309804/1‑150 CGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCTCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCT > 2:1393060/1‑150 GATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTC > 2:5193458/1‑150 AACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTAC < 2:3010184/150‑1 ACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACA > 2:4080707/1‑150 ACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACA > 1:2620220/1‑150 GTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGA < 1:4160362/150‑1 GACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTGAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGG < 2:1136499/150‑1 GACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGG < 2:3439044/150‑1 ACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGG < 2:2977286/150‑1 CGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGT < 1:4021771/150‑1 CGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGT < 2:779184/150‑1 TTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCCGGCCTTTTCGCGGGTGAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGC < 2:2798057/150‑1 TGCCTTCCCGCGCTGGTGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCCGGCCTTTTCGCGGGTGAACCCGCTCCTACAATGGCCACCCGGGCGTCTGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGC < 1:4308998/150‑1 TGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGG < 1:4199765/110‑1 TGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGG > 2:4199765/1‑110 aggaGCGGGTTCACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCC > 1:3365494/5‑150 AACCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCC < 1:571768/150‑1 CCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGT < 2:1161188/150‑1 CCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGG < 2:1243186/104‑1 CCCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGG > 1:1243186/1‑104 CCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTC > 2:1606949/1‑150 CCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTC > 2:3067412/1‑150 CCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGC > 2:1098611/1‑146 CCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGC < 1:1098611/146‑1 CCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTG < 2:4292704/47‑1 CCGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTG > 1:4292704/1‑47 CGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTCT < 2:151306/150‑1 CGCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTCT < 2:680291/150‑1 GCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTCTC < 2:3519571/150‑1 GCTCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTCTC > 2:1273037/1‑150 TCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTCTCAC > 1:105154/1‑150 TCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTCTCAC < 1:159929/150‑1 TCCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTCTCAC < 1:4084099/150‑1 cggACAATGGCCACCTGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTCTCACT < 2:5362662/147‑1 CCTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTCTCACT > 2:2806226/1‑150 CTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTCTCACTG > 2:923555/1‑150 CTACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTCTCACTG > 2:3779212/1‑150 TACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTCTCACTGA > 2:5317679/1‑150 ACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTCTCACTGAA > 2:5225806/1‑150 ACAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTCTCACTGAA > 2:2366352/1‑150 CAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTCTCACTGAAC > 2:5348583/1‑150 CAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTCTCACTGAAC > 1:856629/1‑150 CAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTCTCACTGAAC > 1:3598919/1‑150 CAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTCTCACT < 1:5352372/146‑1 CAATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTCTCACT > 2:5352372/1‑146 CTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCCAGCGCTGGAGTGGCGTGGCGCCCAGCCATTTTCGTGGTTGACCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6089405‑6089565‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacaATGGCCACCAGGGCGTCAGGGGTTGTGACGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGAACAGGTCAACCACGAAAATGGCTGGGCGCCACGCCACTCCAGCGCTGGAAGGCATGCCGAAAACTGGCCGTCTCACTGAAC < NC_002947/6089599‑6089452 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |