New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6123127 =	143 (0.870)	4 (0.030)	3/254	NT	2.8%	coding (1001/1386 nt)	PP_5371	rubredoxin/rubredoxin reductase
	?	NC_002947	6123179 =	145 (0.930)					coding (949/1386 nt)	PP_5371	rubredoxin/rubredoxin reductase
Rejected: Frequency below/above cutoff threshold.

TTGCAGTGCATCGAGCCGGACGGCGAAGGCTACCGACTGACCCTTGCCGACGGTCAGGTCGTCGGTGCAGACCTGGTGCTCAGTGCAGTGGGCTTGCGCCCCAACCTTGAGCTGGCGCTGGAAGCCGGCCTGGACTGTGGCCGCGGGATCAAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6123281‑6123127 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaaggtTGGGGCGCAAGCCCACTGCACTGAGCACCAGGTCTGCACCGACGACCTGACCGTCGGCAAGGGTCAGTCGGTAGCCTTCGCCGTCCGGCTCGATGCACTGCAAGGTCGTGCGCAGGCTCCATTGCACCCCCAACCCCGATAGCGCTTGC  >  NC_002947/6123179‑6123327                                                                                                                                                                                                                                                                                                                  TTGCAGTGCATCGAGCCGGACGGCGAAGGCTACCGACTGACCCTTGCCGACGGTCAGGTCGTCGGTGCAGACCTGGTGCTCAGTGCAGTGGGCTTGCGCCCCAACCTTGAGCTGGCGCTGGAAGCCGGCCTGGACTGTGGCCGCGGGATC                                                                                                                                                            >  1:5099157/1‑150   GCAGTGCATCGAGCCGGACGGCGAAGGCTACCGACTGACCCTTGCCGACGGTCAGGTCGTCGGTGCAGACCTGGTGCTCAGTGCAGTGGGCTTGCGCCCCAACCTTGAGCTGGCGCTGGAAGCCGGCCTGGACTGTGGCCGCGGGATCAA                                                                                                                                                          >  1:3951774/1‑150     AGTGCATCGAGCCGGACGGCGAAGGCTACCGACTGACCCTTGCCGACGGTCAGGTCGTCGGTGCAGACCTGGTGCTCAGTGCAGTGGGCTTGCGCCCCAACCTTGAGCTGGCGCTGGAAGCCGGCCTGGACTGTGGCCGCGGGATCAAGG                                                                                                                                                        <  1:372165/150‑1     AGTGCATCGAGCCGGACGGCGAAGGCTACCGACTGACCCTTGCCGACGGTCAGGTCGTCGGTGCAGACCTGGTGCTCAGTGCAGTGGGCTTGCGCCCCAACCTTGAGCTGGCGCTGGAAGCCGGCCTGGACTGTGGCCGCGGGATCAAGG                                                                                                                                                        >  1:5020413/1‑150      GTGCATCGAGCCGGACGGCGAAGGCTACCGACTGACCCTTGCCGACGGTCAGGTCGTCGGTGCAGACCTGGTGCTCAGTGCAGTGGGCTTGCGCCCCAACCTTGAGCTGGCGCTGGAAGCCGGCCTGGACTGTGGCCGCGGGATCAAGGT                                                                                                                                                       <  1:3907523/150‑1                                          CCTTGCCGACGGTCAGGTCGTCGGTGCAGACCTGGTGCTCAGTGCAGTGGGCTTGCGCCCCAACCTTGAGCTGGCGCTGGAAGCCGGCCTGGACTGTGGCCGCGGGATCAAG                                                                                                                                                         <  1:2335550/112‑1                                          CCTTGCCGACGGTCAGGTCGTCGGTGCAGACCTGGTGCTCAGTGCAGTGGGCTTGCGCCCCAACCTTGAGCTGGCGCTGGAAGCCGGCCTGGACTGTGGCCGCGGGATCAAG                                                                                                                                                         >  2:2335550/1‑112                                                                                                    CCCAACCTTGAGCTGGCGCTGGAAGCCGGCCTGGACTGTGGCCGCGGGATCAAGGTTGGGGCGCAAGCCCACTGCACTGAGCACCAGGTCTGCACCGACGACCTGACCGTCGGCAAGGGTCAGTCGGTAGCCTTCGCCGTCCGGCTCGAT                                                         >  2:2341718/1‑150                                                                                                    CCCAACCTTGAGCTGGCGCTGGAAGCCGGCCTGGACTGTGGCCGCGGGATCAAGGTTGGGGCGCAAGCCCACTGCACTGAGCACCAGGTCTGCACCGACGACCTGACCGTCGGCAAGGGTCAGTCGGTAGCCTTCGCCGTCCGGCTCGAT                                                         >  2:3557508/1‑150                                                                                                       AACCTTGAGCTGGCGCTGGAAGCCGGCCTGGACTGTGGCCGCGGGATCAAGGTTGGGGCGCAAGCCCACTGCACTGAGCACCAGGTCTGCACCGACGACCTGACCGTCGGCAAGGGTCAGTCGGTAGCCTTCGCCGTCCGGCTCGATGCA                                                      >  1:3411914/1‑150                                                                                                           TTGAGCTGGCGCTGGAAGCCGGCCTGGACTGTGGCCGCGGGATCAAGGTTGGGGCGCAAGCCCACTGCACTGAGCACCAGGTCTGCACCGACGACCTGACCGTCGGCAAGGGTCAGTCGGTAGCCTTCGCCGTCCGGCTCGATGCACTGC                                                  <  1:3557508/150‑1                                                                                                                                                     TCAAGGTTGGGGCGCAAGCCCACTGCACTGAGCACCAGGTCTGCACCGACGACCTGACCGTCGGCAAGGGTCAGTCGGTAGCCTTCGCCGTCCGGCTCGATGCACTGCAAGGTCGTGCGCAGGCTCCATTGCACCCCCAACCCCGATAGC        >  1:4632776/1‑150                                                                                                                                                       AAGGTTGGGGCGCAAGCCCACTGCACTGAGCACCAGGTCTGCACCGACGACCTGACCGTCGGCAAGGGTCAGTCGGTAGCCTTCGCCGTCCGTCTCGATGCACTGCAAGGTCGTGCGCAGGCTCCATTGCACCCCCAACCCCGATAGCGC      <  1:3825414/150‑1                                                                                                                                                         GGTTGGGGCGCAAGCCCACTGCACTGAGCACCAGGTCTGCACCGACGACCTGACCGTCGGCAAGGGTCAGTCGGTAGCCTTCGCCGTCCGGCTCGATGCACTGCAAGGTCGTGCGCAGGCTCCATTGCACCCCCAACCCCGATAGCGCTT    >  1:2573700/1‑150                                                                                                                                                         GGTTGGGGCGCAAGCCCACTGCACTGAGCACCAGGTCTGCACCGACGACCTGACCGTCGGCAAGGGTCAGTCGGTAGCCTTCGCCGTCCGGCTCGATGCACTGCAAGGTCGTGCGCAGGCTCCATTGCACCCCCAACCCCGATAGCGCTT    >  2:5291785/1‑150                                                                                                                                                          GTTGGGGCGCAAGCCCACTGCACTGAGCACCAGGTCTGCACCGACGACCTGACCGTCGGCAAGGGTCAGTCGGTAGCCTTCGCCGTCCGGCTCGATGCACTGCAAGGTCGTGCGCAGGCTCCATTGCACCCCCAACCCCGATAGCGCTTG   >  2:4993870/1‑150                                                                                                                                                           TTGGGGCGCAAGCCCACTGCACTGAGCACCAGGTCTGCACCGACGACCTGACCGTCGGCAAGGGTCAGTCGGTAGCCTTCGCCGTCCGGCTCGATGCACTGCAAGGTCGTGCGCAGGCTCCATTGCACCCCCAACCCCGATAGCGCTTGC  <  2:554869/150‑1                                                                                                                                                                                                                                                                                                                  TTGCAGTGCATCGAGCCGGACGGCGAAGGCTACCGACTGACCCTTGCCGACGGTCAGGTCGTCGGTGCAGACCTGGTGCTCAGTGCAGTGGGCTTGCGCCCCAACCTTGAGCTGGCGCTGGAAGCCGGCCTGGACTGTGGCCGCGGGATCAAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6123281‑6123127 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaaggtTGGGGCGCAAGCCCACTGCACTGAGCACCAGGTCTGCACCGACGACCTGACCGTCGGCAAGGGTCAGTCGGTAGCCTTCGCCGTCCGGCTCGATGCACTGCAAGGTCGTGCGCAGGCTCCATTGCACCCCCAACCCCGATAGCGCTTGC  >  NC_002947/6123179‑6123327

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.