New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 207276	0 (0.000)	6 (0.040)	6/264	NT	100%	coding (12782/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 207963	NA (NA)					coding (13469/26049 nt)	PP_0168	putative surface adhesion protein

TGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACCCCGGTCAGCACGTCGGTCACCGACGAGCCGGGCACCCCAGGCAACGAAGGCGACTTGGTCAAGGTCACCATCACAGCCGACCAGACCTCGGTGGCTGAGAACGTCAAACCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAATGCCC  >  NC_002947/207127‑207425                                                                                                                                                      |                                                                                                                                                      tGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACCCCGGTCAGCACGTCGGTCACCGACGAGCC                                                                                                                                                       >  1:2284997‑M1/1‑150 (MQ=255) tGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACCCCGGTCAGCACGTCGGTCACCGACGAGCC                                                                                                                                                       >  1:2290245‑M1/1‑150 (MQ=255) tGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACCCCGGTCAGCACGTCGGTCACCGACGAGCC                                                                                                                                                       >  2:4942556‑M1/1‑150 (MQ=255) tGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACCCCGGTCAGCACGTCGGTCACCGACGAGCC                                                                                                                                                       >  1:3792161‑M1/1‑150 (MQ=255) tGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACCCCGGTCAGCACGTCGGTCACCGACGAGCC                                                                                                                                                       >  2:4246182‑M1/1‑150 (MQ=255) tGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACCCCGGTCAGCACGTCGGTCACCGACGAGCC                                                                                                                                                       >  2:3746075‑M1/1‑150 (MQ=255) tGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACCCCGGTCAGCACGTCGGTCACCGACGAGCC                                                                                                                                                       >  2:2945970‑M1/1‑150 (MQ=255)                              aCGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGACGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCGACGAGCCaggtcgccttcgttgcccggcgtacctgg                                                                                                                          <  1:2514526‑M1/150‑30 (MQ=255)                                gttggcacCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACACTGGACAAGACCCCGGTCAGCACGTCGGTTACCGACGAGCCaggtcgccttcgttgcccggcgtacctggct                                                                                                                        <  2:705998‑M1/147‑32 (MQ=255)                                                        aaaTCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACCCCGGTCAGCACGTCGGTCACCGACGAGCC                                                                                                                                                       <  1:1744289‑M1/95‑1 (MQ=255)                                                        aaaTCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACCCCGGTCAGCACGTCGGTCACCGACGAGCC                                                                                                                                                       >  2:1744289‑M1/1‑95 (MQ=255)                                                           tcgatcgCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACACTGGACAAGACCCCGGTCAGCACGTCGGTTACCGACGAGCCaggtcgccttcgttgcccggcgtacct                                                                                                                            <  1:2146154‑M1/119‑28 (MQ=255)                                                           tcgatcgCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACACTGGACAAGACCCCGGTCAGCACGTCGGTTACCGACGAGCCaggtcgccttcgttgcccggcgtacct                                                                                                                            >  2:2146154‑M1/1‑92 (MQ=255)                                                                                                  gAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCGACGAGCCaggtcgccttcgttgcccggcgtacctggctcgtc                                                                                                                    >  2:3055602‑M1/1‑53 (MQ=255)                                                                                                  gAGCAACTGACGCTGGACAAGACGCCGGTCAGCACGTCGGTTACCGACGAGCCaggtcgccttcgttgcccggcgtacctggctcgtc                                                                                                                    <  1:3055602‑M1/88‑36 (MQ=255)                                                                                                                                                      caggtcgccttcgttgcccggcgtacctggctcgtcggtaaccgacgtgctgaccggggtcttgtccagtgtcagttgctcgaacttgccgacatccgcaccttcaacggttgcgatcgatttgatcacggggtcgttggtgccaacgta  >  2:4002450‑M1/1‑1 (MQ=255)                                                                                                                                                      caggtcgccttcgttgcccggcgtacctggctcgtcggtaaccgacgtgctgaccggggtcttgtccagtgtcagttgctcgaacttgccgacatccgcaccttcaacggttgcgatcgatttgatcacagggtcgttggtgccaacgta  >  2:2867677‑M1/1‑1 (MQ=255)                                                                                                                                                      caggtcgccttcgttgcccggcgtacctggctcgtcggtaaccgacgtgctgaccggggtcttgtccagtgtcagttgctcgaacttgccgacatccgcaccttcaacggttgcgatcgatttgatcacagggtcgttggtgccaacgta  >  1:315952‑M1/1‑1 (MQ=255)                                                                                                                                                      caggtcgccttcgttgcccggcgtacctggctcgtcggtaaccgacgtgctgaccggggtcttgtccagtgtcagttgctcgaacttgccgacatccgcaccttcaacggttgcgatcgatttgaccacagggtcgttggtgccaacgta  >  2:2868047‑M1/1‑1 (MQ=255)                                                                                                                                                      caggtcgccttcgttgcccggcgtacctggctcgtcgggaaccgacgtgctgaccggggtcttgtccagtgtcagttgctcgaacttgccgacatccgcaccttcaacggttgcgatcgatttgatcacagggtcgttggtgccaacgta  <  2:650430‑M1/150‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                      TGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGCAACTGACGCTGGACAAGACCCCGGTCAGCACGTCGGTCACCGACGAGCCGGGCACCCCAGGCAACGAAGGCGACTTGGTCAAGGTCACCATCACAGCCGACCAGACCTCGGTGGCTGAGAACGTCAAACCGACCTTCACCGTGCACGTCAACCAGCCGCTGGCCCACGACCTGGTCGTGACCCTGAGCAACAATGCCC  >  NC_002947/207127‑207425

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.