BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 499220	67 (0.410)	9 (0.070)	5/220	NT	13.8%	intergenic (+61/‑235)	uhpA/PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
*	?	NC_002947	= 499259	57 (0.420)	9 (0.070)	5/220	NT	13.8%	intergenic (+100/‑196)	uhpA/PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein

Only 100 of 152 total aligned reads displayed.

CCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGA  >  NC_002947/499074‑499366

cccACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACgg                                                                                                                                                 <  2:4038028/150‑1 (MQ=255)

cccACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACgg                                                                                                                                                 <  1:2746698/150‑1 (MQ=255)

  gcaagcgcccgaaaatcgggggtactgagagaatgccatcatccggatggaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccacgaaaccTGTGGGAGCGGGCAGGCCCCCGCACAggc                                                                                                                                               <  1:2557070‑M1/29‑1 (MQ=255)

  cacaAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGACCGggc                                                                                                                                               >  2:2557070/1‑150 (MQ=255)

   acaAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGggcc                                                                                                                                              >  1:5270822/1‑150 (MQ=255)

    caAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGggcct                                                                                                                                             <  1:2913783/150‑1 (MQ=255)

     aaGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGggcctg                                                                                                                                            >  1:1139056/1‑150 (MQ=255)

     aaGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGggcctg                                                                                                                                            <  2:3751144/150‑1 (MQ=255)

       ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGggcctggc                                                                                                                                          <  1:4053936/150‑1 (MQ=255)

       ggCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGggcctggc                                                                                                                                          <  1:765428/150‑1 (MQ=255)

        gCACGCCTGATGCAGAAGTTGAAAGTGATCTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACCAGCTGATCTGATTGCGACATACGGGTGCCCGAATCTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGggcctggcc                                                                                                                                         <  2:1531689/150‑1 (MQ=255)

         cACGCCTTATGCATAATTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGggcctggcct                                                                                                                                        <  1:3649768/150‑1 (MQ=255)

           cgaaaatcgggggtactgagagaatgccatcatccggatggaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccacgaaaccTGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCctgc                                                                                                                                      <  1:5009298‑M1/38‑1 (MQ=255)

           cGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCctgc                                                                                                                                      <  2:1298351/150‑1 (MQ=255)

            gCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCctgct                                                                                                                                     <  2:1435153/150‑1 (MQ=255)

               tGATGCAGCAGTTGAAAGTGAACTCGCTGGCGGAGCGGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGAt                                                                                                                                  <  2:5131150/150‑1 (MQ=255)

                gATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGAtc                                                                                                                                 <  2:2742148/150‑1 (MQ=255)

                 aTGCAGATGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGAtct                                                                                                                                <  1:2766285/150‑1 (MQ=255)

                   gCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGAtctgt                                                                                                                              >  1:3591493/1‑148 (MQ=255)

                    cAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAACCTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTa                                                                                                                             <  2:2775265/150‑1 (MQ=255)

                     aGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTAt                                                                                                                            <  1:2140477/150‑1 (MQ=255)

                      gAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATg                                                                                                                           >  1:3024866/1‑150 (MQ=255)

                       aaGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATgg                                                                                                                          <  2:5270822/150‑1 (MQ=255)

                            gAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGggcctggc                                                                                                                                          <  2:1990667/129‑1 (MQ=255)

                            gAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGggcctggc                                                                                                                                          >  1:1990667/1‑129 (MQ=255)

                                 tGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCAATCCCGCGAACCGGCCAGGCCTGCTGATCACTATGGCGGAGCCGGc                                                                                                                >  2:3603148/1‑150 (MQ=255)

                                   aaCTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAcgggccggctcagccatagagatcagcaggccaggccc                                                                                                              <  2:3407513‑M1/150‑39 (MQ=255)

                                   aaCTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCct                                                                                                              <  1:5016573/150‑1 (MQ=255)

                                    aCTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCctc                                                                                                             <  2:4502900/150‑1 (MQ=255)

                                       cGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGcccgttc                                                                                                          <  2:4797442/150‑6 (MQ=255)

                                       cGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttc                                                                                                          >  2:1139056‑M2/1‑147 (MQ=255)

                                         catccggatggaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccacgaaaccTGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTcgc                                                                                                        >  2:2198045‑M1/83‑150 (MQ=255)

                                          tGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcg                                                                                                       >  2:4270930‑M2/1‑144 (MQ=255)

                                           tccggatggaatatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccacgaaaccTGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCgg                                                                                                      >  1:2108310‑M1/81‑150 (MQ=255)

                                           tccggatggaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccacgaaaccTGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCgg                                                                                                      >  2:5286472‑M1/81‑150 (MQ=255)

                                           ggCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgg                                                                                                      >  1:3067050‑M2/1‑143 (MQ=255)

                                           ggCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgg                                                                                                      >  2:3844648‑M2/1‑143 (MQ=255)

                                           ggCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgg                                                                                                      >  2:3222502‑M2/1‑143 (MQ=255)

                                           ggCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACGCGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgg                                                                                                      >  1:3067052‑M2/1‑143 (MQ=255)

                                              ggAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGACgaggccggctcagccatagagatcagcaggccaggcccgttcgcgggca                                                                                                   <  2:240614‑M1/150‑50 (MQ=255)

                                              ggAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAgaggccggctcagccatagagatcagcaggccaggcccgttcgcgggca                                                                                                   <  2:2970765‑M1/150‑50 (MQ=255)

                                                aGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgggcatg                                                                                                 >  2:1682502‑M2/1‑138 (MQ=255)

                                                   gaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccacgaaaccTGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGccc                                                                                              >  2:5009298‑M1/73‑150 (MQ=255)

                                                    ggTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgggcatgcccg                                                                                             >  1:2581631‑M2/1‑134 (MQ=255)

                                                      tGAAGTACGCCATGGAGCACTTGCTGATCTGATTGCGACTTACGGGTGCCCGAAACTTGCCGATGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCGTCttcgcgggcatgcccgct                                                                                           >  1:4041864‑M2/1‑132 (MQ=255)

                                                       gAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCGGATCGCGATGGCTGTGCCGGCCTCttcgcgggccggcccgctc                                                                                          <  2:5212540‑M2/150‑20 (MQ=255)

                                                                cATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAgaggccggctcagccatagagatcagcaggccaggcccgttcgcg                                                                                                       >  2:3615356‑M1/1‑83 (MQ=255)

                                                                   ggAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGCACGGGCCGGGGCTGCGGATATCGATGGCTGAGCCGGCCACgtcgcgggcatgcccgcacccacacgattag                                                                              <  1:2238891‑M2/150‑32 (MQ=255)

                                                                     cgCACACGCTGATCGGTTTGCGACATACGGGTGCCCCAAACTTGCCGAAGCCTTTGTGGGCGCGGGCATGCCCGCGACGGGGCCTGGCGTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGGGGGCATGCCCGCTCCCACAGGTTTCGTg                                                                            <  2:329069/149‑1 (MQ=38)

                                                                     aGCACATGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTg                                                                            <  2:5394746/150‑1 (MQ=255)

                                                                       cacaAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCGGCTGATCTCTATGGCTGATCCGGCCTCTTCGCGGGCATGCCCCCACCCACAGGGTTCGTGGt                                                                          >  2:2106718/1‑150 (MQ=255)

                                                                            gCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCCTGCCCGCGCACGGGCCTGGCCGGCTGATCTCTATGGCTGAGCCGGCCACTTCGCGGGCATGCCCGCTCCCACACGGTTCGTGGTTGGcg                                                                     >  1:4541860/1‑149 (MQ=255)

                                                                            gCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGCACGGGCCGGGCCTGGTGATCACGATGGCTGAGCCCGCCTCATCGCGGGCCAGCCCCCACCCACACGTTTAGGGGTTGGcg                                                                     >  1:4541649/1‑149 (MQ=255)

                                                                             ctgatctgttGGCGACATCCGGGTGCCCGAAACTTGCCGAAGCCTTTGTGGGAGCGGGCTGGCCCGCGACCGGGCCTGGCCTGGTGTTCTCTATGGCTGAGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTc                                                                    <  2:1635368/150‑1 (MQ=38)

                                                                                atctgatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgggcatgc                                                                                                >  2:3179300‑M2/1‑106 (MQ=255)

                                                                                atctgatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgggcatgc                                                                                                <  1:3179300‑M2/119‑14 (MQ=255)

                                                                                atctgatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCGGGTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGGTTCGTGGTTGGCACGCa                                                                 >  2:848366/1‑150 (MQ=255)

                                                                                   tgatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGggcctggc                                                                                                                                          >  1:200186/1‑74 (MQ=255)

                                                                                     tttGCGACATCCGGGTGCCCGAAACTTGCCGACGCCTTTGTGGGAGGGGGCATGCCCGCGACGGGGCCTGGCCTGCTGATCTCTCTGGCTGAGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGc                                                            <  2:4596547/149‑1 (MQ=38)

                                                                                          gACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGTGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTcc                                                       >  2:4050400/1‑150 (MQ=255)

                                                                                          gACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATTCCCGCGAACGGGCCTGGCCGGCTGGTCTCTATGGGTGAGCCGGCCGCTTCGCGGGCCTGCCCCCGCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCAttac                                                       >  2:4785035/1‑148 (MQ=255)

                                                                                              tACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCGGGCCTGCTGTTCGCGATGGCTGAGCCGGCCTCGTCGCGGGCATGCCCGCTCCCACAGGGGTCGTGGTTGGCTCGCAAGGGCATTCCAATc                                                   >  2:5446153/1‑150 (MQ=39)

                                                                                                   gTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGGGGGGCCGCGGACGGGCCGGGGCGGGGGGTGTCTATGGGGGAGGCGGCCGCGTGGCGGGGCTGCCCGCGCCCCCACGTTTAGTGGTTGGGGCGCGAGGGCCTTACAATACcccc                                              >  2:1543918/1‑150 (MQ=255)

                                                                                                      cccGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAgaggccggctcagccatagagatcagcaggccaggcccgttcgcg                                                                                                       <  1:1612854‑M1/90‑46 (MQ=255)

                                                                                                      cccGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAAgaggccggctcagccatagagatcagcaggccaggcccgttcgcg                                                                                                       >  2:1612559‑M1/1‑45 (MQ=255)

                                                                                                       ccGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTGTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATcc                                          <  2:5391757/150‑1 (MQ=255)

                                                                                                        cGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGCACGGGCCTTGCCAGCGGGTGACTATGGCTGATCCGGCCTCTTCGCCGGCCTGCCCCCTCCCCCAGGGTTGGTGGGGGGCTCGCCAGGGCATTCCAAAACCGCCATCCt                                         >  2:4256693/1‑150 (MQ=255)

                                                                                                        cGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCGGCTGATCGCGATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCCCAGGGTGCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCAAccg                                         >  2:3119435/1‑149 (MQ=39)

                                                                                                          aaaCTTGCCGACGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTAGGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTg                                       <  2:3098365/150‑1 (MQ=255)

                                                                                                                  cGAAGCCTATGTGGGAGCGGGCCATCCCCCGCACGGGCCAGGCCGGCGGGTCGCGATGGGGGAGCCGGCCGCGTCGCCGGCCGGCCCCCTCCCCCACGTGTCGTGGTTGGCGCGCCCGGGCCTTCCAAAACCCCCCACCGTGGAGGGCGa                               >  2:3793748/1‑150 (MQ=255)

                                                                                                                    ctaatcgtgtgggtgcggGCATGCCCGCGACgtggccggctcagccatcgatatccgcagccccggcccgtgcgcgggcatgcccgctcccacataggcttcggcaagtttcgggcacccgtatgtcgcaatcagatcagcttgtgctcc                             <  1:2238891‑M1/143‑120 (MQ=255)

                                                                                                                     aGCCTATGGGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATcc                            <  2:4312999/150‑1 (MQ=255)

                                                                                                                        cttTGTGGGAGCGGGCATGCACGCGAAGGGGCCTGGCCTGCTTATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGTCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTa                         >  2:4530080‑M1/4‑150 (MQ=255)

                                                                                                                              GGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCGTGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTAcaacaa                   >  2:3024866‑M1/1‑150 (MQ=255)

                                                                                                                               ggtgCGGGCAGGCCCGCTTAGGGGCCTGGCCTGCTTATCTCTATGGGTGCGCGGGCCTCTTCGGGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGATCGCCCTacaaggat                  <  1:4941368/147‑5 (MQ=255)

                                                                                                                               ggcgcggGCATGCCCGGGACgtggccggcaccgcctctgagatcagcaggccaggcccgttcgcgggcatccccgctcccacataggcttcggcaagtttcgggcacccgtatgtcgcaatcagatcagcttgtgctccatggcgtactt                  <  2:1795520‑M1/147‑131 (MQ=255)

                                                                                                                               GGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACaaa                  >  2:3008333‑M1/1‑150 (MQ=255)

                                                                                                                                gAGCGGGCCGGCCCGCGAAgaggccggcacagccatcgcgatccgcaggccaggcccgttcgcgggcatgcccgctcccacataggcttcggcaagtttcgggcacccgtatgtcgcaatcagatcagcttgtgctccatggcgtacttc                 <  2:5212540‑M1/150‑132 (MQ=255)

                                                                                                                                   cGGGCATGCCCGCGAAgaggccggctcagccatagagatcagcaggccaggcccgttcgcgggcatgcccgctcccacataggcttcggcaagtttcgggcacccgtatgtcgcaatcagatcagcttgtgctccatggcgtacttcacc              >  1:2581589‑M1/1‑16 (MQ=255)

                                                                                                                                   cGGGCATGCCCGCGAAgaggccggctcagccatagagatcagcaggccaggcccgttcgcgggcatgcccgctcccacataggcttcggcaagtttcgggcacccgtatgtcgcaatcagatcagcttgtgctccatggcgtacttcacc              >  1:2581631‑M1/1‑16 (MQ=255)

                                                                                                                                    GGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTc             <  2:680619‑M1/150‑1 (MQ=255)

                                                                                                                                      gCATGCCCGCGAAgaggccggctcagccatagagatcagcaggccaggcccgttcgcgggcatgcccgctcccacataggcttcggcaagtttcgggcacccgtatgtcgcaatcagat                                          >  2:3179300‑M1/1‑13 (MQ=255)

                                                                                                                                      gCATGCCCGCGAAgaggccggctcagccatagagatcagcaggccaggcccgttcgcgggcatgcccgctcccacataggcttcggcaagtttcgggcacccgtatgtcgcaatcagat                                          <  1:3179300‑M1/119‑107 (MQ=255)

                                                                                                                                         tGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgggcatgcccgctcccacataggcttcggcaagtttcgggcacccgtatgtcgcaatcagatcagcttgtgctccatggcgtacttcaccagctcc        <  2:2970765‑M2/150‑102 (MQ=255)

                                                                                                                                         tGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCgtcgcgggcatgcccgctcccacataggcttcggcaagtttcgggcacccgtatgtcgcaatcagatcagcttgtgctccatggcgtacttcaccagctcc        <  2:240614‑M2/150‑102 (MQ=255)

                                                                                                                                         TGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCCTcc        <  2:1485889‑M1/150‑1 (MQ=255)

                                                                                                                                         TGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATcc        <  2:4231862‑M1/150‑1 (MQ=255)

                                                                                                                                           CCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCgg      <  2:2500938‑M1/150‑1 (MQ=255)

                                                                                                                                            ccGCGAAgaggccggctcagccatagagatcagcaggccaggcccgttcgcgggcatgcccgctcccacataggcttcggcaagtttcgggcacccgtatgtcgcaatcagatcagcttgtgctccatggcgtacttcaccagctccgcc     >  1:3067050‑M1/1‑7 (MQ=255)

                                                                                                                                            ccGCGAAgaggccggctcagccatagagatcagcaggccaggcccgttcgcgggcatgcccgctcccacataggcttcggcaagtttcgggcacccgtatgtcgcaatcagatcagaatgtgctccatggcgtacttcaccagctccgcc     >  1:3067206‑M1/1‑7 (MQ=255)

                                                                                                                                            CCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGga     <  2:4597463‑M1/150‑1 (MQ=255)

                                                                                                                                            CCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGga     <  2:5126862‑M1/150‑1 (MQ=255)

                                                                                                                                            CCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGga     <  1:711483‑M1/150‑1 (MQ=255)

                                                                                                                                            CCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCACTACAACAAATCTTCCATCCGga     <  2:3226942‑M1/150‑1 (MQ=255)

                                                                                                                                            CCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAAACCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCCTCCGga     <  1:147682‑M1/150‑1 (MQ=255)

                                                                                                                                             cgcgAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgggcatgcccgctcccacataggcttcggcaagtttcgggcacccgtatgtcgcaatcagatcagcttgtgctccatg                          <  1:3615356‑M2/128‑84 (MQ=255)

                                                                                                                                             cgcgAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgggcatgcccgctcccacataggcttcggcaagtttcggg                                                                >  2:1612559‑M2/1‑45 (MQ=255)

                                                                                                                                             cgcgAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgggcatgcccgctcccacataggcttcggcaagtttcggg                                                                <  1:1612559‑M2/90‑46 (MQ=255)

                                                                                                                                             cgcgAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgggcatgcccgctcccacataggcttcggcaagtttcggg                                                                >  2:1612854‑M2/1‑45 (MQ=255)

                                                                                                                                             CGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCggag    <  2:5050287‑M1/150‑2 (MQ=255)

CCCACAAGGCACGCCTGATGCAGAAGTTGAAAGTGAACTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGA  >  NC_002947/499074‑499366

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.