New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 131172586 (0.520)8 (0.050) 8/242 NT 8.8% intergenic (‑187/+91) PP_1144/rapA membrane protein/RNA polymerase‑associated protein RapA
?NC_002947 = 1311784 89 (0.600)intergenic (‑246/+32) PP_1144/rapA membrane protein/RNA polymerase‑associated protein RapA

Only 100 of 125 total aligned reads displayed.

ACAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATT  >  NC_002947/1311576‑1311873
                                                                                                                                                     |                                                                                                                                                     
aCAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGC                                                                                                                                                       <  2:324731‑M1/150‑1 (MQ=255)
aCAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGC                                                                                                                                                       <  2:3693773‑M1/150‑1 (MQ=255)
aCAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGC                                                                                                                                                       <  2:324539‑M1/150‑1 (MQ=255)
aCAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGC                                                                                                                                                       <  2:324527‑M1/150‑1 (MQ=255)
aCAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGC                                                                                                                                                       <  2:324515‑M1/150‑1 (MQ=255)
aCAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGC                                                                                                                                                       <  2:4654022‑M1/150‑1 (MQ=255)
  aaCCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGa                                                                                                                                                     >  1:2876871/1‑150 (MQ=255)
  aaCCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGa                                                                                                                                                     <  2:1406725/150‑1 (MQ=255)
  aaCCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGa                                                                                                                                                     >  1:1996645/1‑150 (MQ=255)
    cccTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGc                                                                                                                                                   >  1:3936505/1‑150 (MQ=255)
        gtgCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCcgc                                                                                                                                               <  1:3488685/150‑1 (MQ=255)
        gtgCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCcgc                                                                                                                                               <  1:3488905/150‑1 (MQ=255)
        gtgCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCcgc                                                                                                                                               <  2:4625423/150‑1 (MQ=255)
        gtgCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCcgc                                                                                                                                               <  2:4625306/150‑1 (MQ=255)
        gtgCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAAGGCCTTCCTGTGGGAGCGGGCGAGCCcgc                                                                                                                                               <  1:143790/150‑1 (MQ=255)
           cAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGaa                                                                                                                                            <  1:3408365/150‑1 (MQ=255)
             gACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGGAGc                                                                                                                                          >  2:204268/1‑150 (MQ=255)
             gACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGc                                                                                                                                          <  2:5253137/150‑1 (MQ=255)
                tGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATc                                                                                                                                       >  2:4267959/1‑150 (MQ=255)
                tGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATc                                                                                                                                       >  2:4268126/1‑150 (MQ=255)
                   ccAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAc                                                                                                                                    <  2:5054247/150‑1 (MQ=255)
                   ccAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCAc                                                                                                                                    >  2:2609646/1‑150 (MQ=255)
                       agGCAGTATAGGACGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACCGca                                                                                                                                <  1:4113819/150‑2 (MQ=255)
                        ggCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCgg                                                                                                                               <  2:1111607/150‑1 (MQ=255)
                           aGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTgg                                                                                                                            <  2:1999367/150‑1 (MQ=255)
                              ataGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATg                                                                                                                        <  2:2547990/150‑1 (MQ=255)
                              ataGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACCGCAGTGG‑ATg                                                                                                                        <  2:5356150/150‑1 (MQ=255)
                              ataGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACCGCAGTGG‑ATg                                                                                                                        <  1:3600951/150‑1 (MQ=255)
                               taGGAAGCACTACTTAAGCCTTCCTTAATAATGGAACAATTATTTATACTATTTTGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGCCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACCGCAGTGG‑ATGc                                                                                                                       <  1:2452343/150‑1 (MQ=255)
                                 ggaaggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTATTGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCa                                                                                                                     <  1:1017674/150‑1 (MQ=255)
                                 ggaaggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCa                                                                                                                     <  1:1017730/150‑1 (MQ=255)
                                   aaggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGa                                                                                                                                             >  2:2602524/1‑125 (MQ=255)
                                   aaggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGa                                                                                                                                             <  1:2603003/125‑1 (MQ=255)
                                   aaggaGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGa                                                                                                                                             <  1:2602524/125‑1 (MQ=255)
                                        gTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgca                                                                                                               <  1:5377029‑M1/150‑41 (MQ=255)
                                         tACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGTTTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCttt                                                                                                             <  1:3910755/150‑1 (MQ=255)
                                           cTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGc                                                                                                           <  1:382729/150‑1 (MQ=255)
                                            ttAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATTCCACCGGCGTTTcc                                                                                                          >  2:4806724/1‑150 (MQ=255)
                                            ttAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCGAAGCCTCCCCAGCGGGGG‑ATGCCCCCCGCGTTGcc                                                                                                          >  2:3130097/1‑150 (MQ=255)
                                            ttAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGC                                                                                                                                                       >  2:4138724‑M1/1‑106 (MQ=255)
                                            ttAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGC                                                                                                                                                       <  1:4138724‑M1/106‑1 (MQ=255)
                                             tAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCg                                                                                                         <  1:5440910/150‑1 (MQ=255)
                                               aGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGTAATAATTTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGgt                                                                                                       <  1:2006119/150‑1 (MQ=255)
                                               aGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGgt                                                                                                       <  2:3080794/150‑1 (MQ=255)
                                                gCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCAAAGCCGgtg                                                                                                      <  1:1361999/150‑1 (MQ=255)
                                                gCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCAAATCGCCGTGAGGAATAATTTTGGGGCCCTCCTGCCTTCCTGTGGGCGCGGGCGCGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCAAAGCCGgtg                                                                                                      <  1:2456883/150‑1 (MQ=255)
                                                 ccTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgct                                                                                                      <  1:4995665‑M1/150‑50 (MQ=255)
                                                 ccTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGGCCGCCAACCATACACAGCGGTGG‑GTGCCACCCGCGGTGGCGgtgt                                                                                                     >  2:3412657/1‑150 (MQ=255)
                                                   ttCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCCGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCAAAGCCGgtggca                                                                                                   <  1:1983038/150‑4 (MQ=255)
                                                    tCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGCACCAACCACGGCGGGGG‑TTGCCACCCGCGGTGCCGGTGTTcg                                                                                                  >  2:522601/1‑150 (MQ=255)
                                                     ccTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGAGGCCC‑CGCGCC‑CCTTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgg                                                                                                <  1:381620‑M1/150‑56 (MQ=255)
                                                      cTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCAACCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTcgcg                                                                                                >  2:2664898/1‑150 (MQ=255)
                                                       tGACTATTGGCACAATGATTTCTACTATTTGTTTATAACGCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTCGCgg                                                                                               <  1:237143/150‑1 (MQ=255)
                                                         aCTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAACAATCCACATAGGTGGTATGCAACC‑GCGTTTCCGGGGTTAGCgggg                                                                                             >  2:59314/1‑149 (MQ=255)
                                                          cTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggct                                                                                             <  1:3185955‑M1/150‑59 (MQ=255)
                                                                gCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCCCAGCCACCCCAGCGGTGG‑GTGGCCCCCGCGTTGCCGGTGTTAGCGGGCGGgcccg                                                                                      <  2:2749867‑M2/150‑6 (MQ=255)
                                                                      tGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCAACCACAGGGGGGG‑GAGGCCCCCGCGTTTCCGGGGTTCGCGGGCGGGCCCCCGcccc                                                                                >  2:3684185/1‑149 (MQ=255)
                                                                        aTTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCCAAGCAAACACAGCGGGGG‑ATGCCACCCGCTTTTCCGGTGTTCGCGGGCGGgcccgcgcccaca                                                                              <  2:2307597‑M2/150‑14 (MQ=255)
                                                                           tCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGCAGCAACCACTGCGGTGG‑GTGCCCCCCGCGTGGCCCGTGTTCGCGGGCGTgcccccgcccaccagg                                                                           <  1:4839563‑M2/150‑17 (MQ=255)
                                                                            cTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAggg                                                                          <  2:4467907/150‑1 (MQ=255)
                                                                            cTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCGAAGCATACACAGCGGTGG‑ATGCCACCGGCGGTGCCGGGGTTCGCCGGCGGGCCCGCTCCCACCAggg                                                                          >  2:4750366/1‑150 (MQ=255)
                                                                             tACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCg                                                                                                         >  1:4387704/1‑118 (MQ=255)
                                                                             tACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCg                                                                                                         <  2:4387704/118‑1 (MQ=255)
                                                                                  tttGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCgg                                                                    <  2:4763931/150‑1 (MQ=255)
                                                                                  tttGGTTATAACTCCAATCGCAGGGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCgg                                                                    <  2:1979826/150‑1 (MQ=255)
                                                                                     ggTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCCAAGCAAACAAAGCGGGGG‑ATTCCACCCGCGTTGGCCGGGTTCGCGGGCGTGCCCCCTCCCACAACGGGCGCGGGGc                                                                 >  2:1841965/1‑150 (MQ=255)
                                                                                        tataACCCCAATCGCCGTGAGTAATAATTTTGGGGCCCTAAGGCCTTCGTGTGGGCGCGGGCGCGCCCGCGACGCATCCACTGCGGGGG‑ATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTg                                                              <  1:907913/150‑1 (MQ=25)
                                                                                         ataACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTg                                                                                                                                  >  1:1489618/1‑82 (MQ=255)
                                                                                         ataACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTg                                                                                                                                  <  2:1489618/82‑1 (MQ=255)
                                                                                         ataACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTg                                                                                                                                  <  2:1489764/82‑1 (MQ=255)
                                                                                         ataACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTg                                                                                                                                  >  1:1489764/1‑82 (MQ=255)
                                                                                             cTCCAATCGCAGTGCGGAATAAATTTGGGGCCCTAAGGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTa                                                         <  1:3577010/150‑1 (MQ=255)
                                                                                              tCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCCAAGCATACACAGCGGGGG‑TTGCCACCCGCGTTGCCGGTGTTCGCGGGCGTGCCCCCTCCCCAAACGGGCGCGGGGCCGGCGCTag                                                        >  2:3068148/1‑150 (MQ=37)
                                                                                              tCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCCAAACAAACCCAGCGGGGG‑GTTGCACCCCCTTTTCCGGGGGTTGCGGGCGGGCCCCCGCCCCCAACGGGCGCCGGGCCAgcccaag                                                        >  1:432941/1‑145 (MQ=255)
                                                                                               ccAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCAACCACAGCGGGGG‑ATTCCACCGGCGTTGCCGGGGGTCGCGGGCGTGCCCCCTCCCACAAGGGGCGCGGGGCCAGCGCTagc                                                       >  2:1281256/1‑150 (MQ=38)
                                                                                               ccAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCCCGAAGCATACACAGCGGTGG‑ATGCCACCCGCGTTGCCCGTGTTAGCGGGCGTGCCCCCTCCCACAAGGGGCGCGGGGCCAGCGCTagc                                                       >  2:1280811/1‑150 (MQ=255)
                                                                                                 aaTCGCAGTGAGGAATAAATTTGGGGCCCTCATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTagcca                                                     <  2:4224767/150‑1 (MQ=255)
                                                                                                              aaTAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCAcgc                                        <  2:2208840/150‑1 (MQ=255)
                                                                                                                tAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTgcccgctccc                                                                                 <  2:353722‑M2/107‑11 (MQ=255)
                                                                                                                  attttGGGGCCCTTTTGCCTTCGTGTGGGAGGGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAAt                                    <  1:4750366/148‑1 (MQ=255)
                                                                                                                  aaTTTGGGGCCCTAATGCCTTCCTGTGGGAGGGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAAt                                    <  1:2822558/150‑1 (MQ=255)
                                                                                                                  aaTTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAAt                                    <  2:2117132/150‑1 (MQ=255)
                                                                                                                            ccTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCCCTGCGGGGG‑GTGCCACCGGCTTTGCCGGTGTTCGCGGGCGTgcccgctcccacaggcaggccttagggccccaaatttattcctcacggcgattggcggtctaacc                          <  2:4152464‑M2/150‑66 (MQ=255)
                                                                                                                                     ttCCTGTGGGCGCGGGCGCGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCGAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGggcg                 <  1:2740760/150‑1 (MQ=255)
                                                                                                                                     ttCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGggcg                 <  2:3936505/150‑1 (MQ=255)
                                                                                                                                      cctggtgggcgGGGGCacgcccgcgaacacgggccacgcggggggcacccaccgcagtggttgctgcgcgggctcgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtaga                 <  1:4839563‑M1/146‑135 (MQ=255)
                                                                                                                                       cgtgtgGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGggcggc               <  1:1354479/148‑1 (MQ=255)
                                                                                                                                       ccTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGggcggc               <  1:4267959/150‑1 (MQ=255)
                                                                                                                                       ccTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTGGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGggcggc               <  1:4268126/150‑1 (MQ=255)
                                                                                                                                        cggtgGGAGCGGGGGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGcc              <  2:3477877/148‑1 (MQ=255)
                                                                                                                                         tgtgGGCGCGGGCccgcccgcgaacaccggaaaagcgggtggcatcccccgctgtgtttgcttggggggctcgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaat              <  2:2307597‑M1/150‑138 (MQ=255)
                                                                                                                                            gggAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctcgcccgctcccacaggaaggcattagggccccaaattta                                                      >  1:353722‑M1/1‑10 (MQ=255)
                                                                                                                                            gggAGCGGGCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctcgcccgctcccacaggaaggcattagggccccaaattta                                                      <  2:353722‑M1/107‑98 (MQ=255)
                                                                                                                                             ggAGCGGGCacgcccgcgaaccccggcaaagccggtggcatccaccgcagtggatgcgtcgcgggctcgcccgctcccccaggacggcattagggccccacagttattcctcactgcgattggcgttagaacccactcgtagaaatcctg          >  2:4717758‑M1/1‑9 (MQ=255)
                                                                                                                                                gCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcattgtg      <  2:4627715‑M2/150‑86 (MQ=255)
                                                                                                                                                 cGGGCccgcccgctaacaccggcaacgcgggggccacccaccgctggggtggctgggcgggctcgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcattgtgc      <  2:2749867‑M1/150‑146 (MQ=255)
                                                                                                                                                  gggCacgcccgcgaacaccggcaaagccggtggcatccaccgcagtggatgcttcgcgggctcgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcattgtgcc     >  1:1679751‑M1/1‑4 (MQ=255)
                                                                                                                                                    gCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTgcccgctcccacaggaaggcattagggccccaaatttattcctcactgcgattggagttataaccaaatcgtagaaatcattgtgccat  <  1:4648223‑M2/150‑90 (MQ=255)
                                                                                                                                                    gCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCAtt  >  2:2952054/1‑150 (MQ=255)
                                                                                                                                                    gCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCGTCCAGGCGCAGGGCGGCCTTCTCCAGCAtt  >  2:4696499/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ACAACCCTGTGCAGACTGTCCAGAGGCAGTATAGGAAGGAGTACTTAAGCCTTCCTGACTAATGGCACAATGATTTCTACGATTTGGTTATAACTCCAATCGCAGTGAGGAATAAATTTGGGGCCCTAATGCCTTCCTGTGGGAGCGGGCGAGCCCGCGAAGCATCCACTGCGGTGG‑ATGCCACCGGCTTTGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAAGGGGCGCGGGGCCTGCGCTAGCCAGCCACCAGCACGCGAATGGCTTCCAGGCGCAGGGCGGCCTTCTCCAGCATT  >  NC_002947/1311576‑1311873

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.