New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2101925 =79 (0.480)18 (0.130) 11/222 NT 24.9% intergenic (‑71/‑134) PP_1875/PP_1876 two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
?NC_002947 2102020 = 43 (0.320)intergenic (‑166/‑39) PP_1875/PP_1876 two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein

Only 100 of 125 total aligned reads displayed.

GCTTGTATGACAGGCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGAC  >  NC_002947/2101776‑2102064
                                                                                                                                                     |                                                                                                                                           
gcttgTATGACAGGCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTgg                                                                                                                                             <  2:738902/150‑1 (MQ=255)
gcttgTATGACAGGCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGCCCCCGCTTgg                                                                                                                                             <  2:2700960/150‑1 (MQ=255)
 cttgTATGACAGGCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGgc                                                                                                                                            <  2:2922827/150‑1 (MQ=255)
 cttgTATGACAGGCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGgc                                                                                                                                            <  1:3655643/150‑1 (MQ=255)
 cttgTATGACAGGCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGgc                                                                                                                                            <  1:1968407/150‑1 (MQ=255)
 cttgTATGACAGGCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGgc                                                                                                                                            <  1:2265616/150‑1 (MQ=255)
 cttgTATGACAGGCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGCCCCCGCTTGgc                                                                                                                                            <  2:4319666/150‑1 (MQ=255)
 cttgTATGACAGGCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCGGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGCCCCCGCTTGgc                                                                                                                                            <  1:4002740/150‑1 (MQ=255)
 ccagtgtggtgccccagtcgatgtgcgggcgttgtgccggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcgc                                                                                                                                            >  1:131567‑M1/149‑150 (MQ=255)
 ccagtgtggtgccccagtcgatgtgcgggcgttgtgccggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcgc                                                                                                                                            >  1:1464275‑M1/149‑150 (MQ=255)
  ttgTATGACAGGCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGgcg                                                                                                                                           >  1:3994041/1‑150 (MQ=255)
   tgTATGACAGGCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGgcgc                                                                                                                                          <  1:4270756/150‑1 (MQ=255)
    gtgtggtgccccagtcgatgtgcgggcgttgtgccggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGcc                                                                                                                                         <  1:5186075‑M1/5‑1 (MQ=255)
    gtgtggtgccccagtcgatgtgcgggcgttgtgccggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGcc                                                                                                                                         <  2:4842151‑M1/5‑1 (MQ=255)
    gTATGACAGGCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCTAGCGGGGGCCGCTTGGCGcc                                                                                                                                         <  1:52959/150‑1 (MQ=255)
     tATGACAGGCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCTAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGccc                                                                                                                                        <  2:4633696/150‑1 (MQ=255)
            ccccagtcgatgtgcgggcgttgtgccggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCcgcg                                                                                                                                 <  1:1489223‑M1/13‑1 (MQ=255)
             gCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCgg                                                                                                                                >  2:1012655/1‑150 (MQ=255)
             gCGAGTGGTGAACTTGATATCCAGGCGTCCCGCGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCTTTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCgg                                                                                                                                <  1:3307155/150‑1 (MQ=255)
             cccagtcgatgtgcgggcgttgtgccggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCgg                                                                                                                                >  2:4920714‑M1/137‑150 (MQ=255)
             cccagtcgatgtgcgggcgttgtgccggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCgg                                                                                                                                <  2:1814599‑M1/14‑1 (MQ=255)
              ccagtcgatgtgcgggcgttgtgccggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCggg                                                                                                                               <  2:2735328‑M1/15‑1 (MQ=255)
               cagtcgatgtgcgggcgttgtgccggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGc                                                                                                                              >  2:4160449‑M1/135‑150 (MQ=255)
                 ttGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCtt                                                                                                                            <  2:4264685/150‑1 (MQ=255)
                 ttGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCtt                                                                                                                            <  2:3125917/150‑1 (MQ=255)
                 tgggTGAACTTGATATCCATGAGTCCCGCGCCGGTTTCCCGTCCCTTGCGCGGCGCACGCATCGCCGAATCGCCCCGGCTGCTGGGGGGGCTGTCTGTACATTCCCGTTGAGCGCCACGCGGGGGCCGCTGGGCGCCCCTCCGCGGGcaa                                                                                                                            <  1:1200462/148‑3 (MQ=255)
                 gtcgatgtgcgggcgttgtgccggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCtt                                                                                                                            >  1:9588‑M1/133‑150 (MQ=255)
                   ggTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATCGCCGAATCCCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGc                                                                                                                          <  2:29144/150‑1 (MQ=255)
                   ggTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGc                                                                                                                          <  2:5323212/150‑1 (MQ=255)
                    gggAACTTGATATCCATGAGTCCCGAGCCGGTGTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGGCGGTCTGTTCATTTCAGGTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGcc                                                                                                                         <  2:4589545/148‑1 (MQ=255)
                    gatgtgcgggcgttgtgccggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGcc                                                                                                                         >  1:4999454‑M1/130‑150 (MQ=255)
                    gTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGcc                                                                                                                         >  2:5416439/1‑150 (MQ=255)
                     atgtgcgggcgttgtgccggcaacaggggttcaaggcgcgccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCGTGccc                                                                                                                        <  2:3240951‑M1/22‑1 (MQ=255)
                       aaCTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCgc                                                                                                                      >  1:4861095/1‑149 (MQ=255)
                          ttGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCGGGccccgtcc                                                                                                                   >  2:1938216/1‑145 (MQ=255)
                            gATATCCATGAGTCCCGTGGCGGGTTCCCGTTCCTTGGGCTGCGCATGGATAGCCGAAGAGGCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCCGTTGATCGCCTCGCGGGGGCCGGTTGGCGCCCCTGCGCGGGCTTGCCGGTTCCca                                                                                                                 <  2:2169876/150‑1 (MQ=255)
                               atCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAg                                                                                                              <  2:2864308/150‑1 (MQ=255)
                                 ccATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGgcgc                                                                                                                                          >  2:3242241/1‑120 (MQ=255)
                                 ccATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGGTCCCCCACGt                                                                                                            >  2:5186075/1‑150 (MQ=255)
                                 ccATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGCTCCCACAggg                                                                                                            <  1:4002699/150‑2 (MQ=255)
                                  cATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCACCGCGGGCTTGCCCGTTCCCACAGGTa                                                                                                           <  2:2652055/150‑1 (MQ=255)
                                         cccGAGCCGGTTTCCCGTTCCTTGCGCTGCGCACGCATCGCCGAATCGCCCCGGCGGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCACGGGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTa                                                                                                    <  1:1067010/150‑1 (MQ=39)
                                         cccGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTa                                                                                                    <  2:3619581/150‑1 (MQ=255)
                                         cccGAGCCGGTTTCCCGTTCCTGGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCGGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTa                                                                                                    <  1:4648878/150‑1 (MQ=255)
                                          ccGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTGCGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAg                                                                                                   >  1:1416731/1‑150 (MQ=255)
                                           cgtgCCGTTTTCCCTTTCCTTGGGCTGCGCATGCTTAGCGGAATTGCCCCGGCTGCTTGTGGGTCTTTCTTTTCTTTTCAGTTGATCGCAAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGc                                                                                                  <  1:3074303/147‑1 (MQ=37)
                                           cGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGc                                                                                                  <  2:1338992/150‑1 (MQ=255)
                                            gAGCCGGTTTCCCTTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGccc                                                                                                                        >  1:2046681/1‑127 (MQ=255)
                                                 ggTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAgg                                                                                            <  2:2073490/150‑1 (MQ=255)
                                                   tttCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCGTGGCGCCCCTCCGCGGGCGTGCCCCGTCCCACAGGTACAGCGTAGCCCCCGGCt                                                                                          >  2:675054/1‑150 (MQ=255)
                                                       ccGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAAc                                                                                      <  2:2973941/150‑1 (MQ=255)
                                                       ccGTTCCTTGCGCTGCGAACGCAGAGCCGAATAGCCCGGGCTGCTGGTGGGTCTGTCTGTTCATTCCAGTTGATCGCCACGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAAc                                                                                      <  1:4728184/150‑1 (MQ=39)
                                                        cGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGGTTGCCCGTTCCCACAGGTAGAGCGTATCCCCAGGCTGTACg                                                                                     >  2:1338245/1‑150 (MQ=255)
                                                        cGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCGTGCCCGTTCCCCAAGGTAACGCGTAGCCCCAGGGAGAAcc                                                                                     >  2:212961/1‑149 (MQ=255)
                                                           tCCTTGCGCTGCGCAAGCATAGCCGAATCGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCaa                                                                                  <  1:4382740/150‑1 (MQ=255)
                                                           tCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCaa                                                                                  <  1:4917357/150‑1 (MQ=255)
                                                           tCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCaa                                                                                  <  1:4917347/150‑1 (MQ=255)
                                                           tCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCaa                                                                                  <  1:4382403/150‑1 (MQ=255)
                                                           tCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCaa                                                                                  <  1:4917272/150‑1 (MQ=255)
                                                            gccagtaccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAg                                                                                 >  1:973714‑M1/90‑150 (MQ=255)
                                                            cgttGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTTATCGCCAAGGGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAg                                                                                 <  1:4605683/148‑1 (MQ=255)
                                                             cTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCtt                                                                                                                            <  1:1725171/106‑1 (MQ=255)
                                                             cTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCtt                                                                                                                            >  2:1725171/1‑106 (MQ=255)
                                                             cTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGACTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTGGCCCCTTCCCACACGTACAGCATAGCCCCAGGCTGAACCCAAGc                                                                                >  2:3464806/1‑150 (MQ=255)
                                                                gcgctgcgcAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCACTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCt                                                                             <  1:3927364/150‑1 (MQ=255)
                                                                   ctgcgcAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCtgtg                                                                          <  2:3316071/150‑1 (MQ=255)
                                                                   ctgcgcAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCtgtg                                                                          <  1:2779886/150‑1 (MQ=255)
                                                                   ctgcgcAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGCTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCtgtg                                                                          <  2:3050087/150‑1 (MQ=255)
                                                                   ctgcgcAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTGCGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCtgtg                                                                          <  2:1416731/150‑1 (MQ=255)
                                                                   ccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgcttgGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCtgtg                                                                          >  1:3480065‑M1/83‑150 (MQ=255)
                                                                   ccgattcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCtgtg                                                                          >  1:746864‑M1/83‑150 (MQ=255)
                                                                    tgcgcAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTgg                                                                         <  1:4353399/150‑1 (MQ=255)
                                                                       ttcggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAg                                                                      >  1:3672024‑M1/79‑150 (MQ=255)
                                                                        cAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGc                                                                     <  1:2083247/150‑1 (MQ=255)
                                                                         aaGCATAGCCTAATACCCCCGTCTGCTGGTGTTTCTGTCTTTTCATTTAATTTGATCGCAAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCg                                                                    <  1:5173160/150‑1 (MQ=38)
                                                                         aaGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGGGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCg                                                                    <  1:1110378/150‑1 (MQ=255)
                                                                          ggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcttaacaatctcagttttttgggggccgcttgGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCgg                                                                   >  2:289875‑M1/76‑150 (MQ=255)
                                                                          ggcgcggtccagaaaagcgatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCgg                                                                   >  2:584747‑M1/76‑150 (MQ=255)
                                                                          aGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCgg                                                                   <  1:1902419/150‑1 (MQ=255)
                                                                          aGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCgg                                                                   <  2:4214983/150‑1 (MQ=255)
                                                                                       aGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCTTGCCcgctcc                                                      <  1:1012655/150‑4 (MQ=255)
                                                                                         ccccGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCt                                                                                                                                      >  2:4018102/1‑68 (MQ=255)
                                                                                           ccGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTc                                                                                                                    >  1:2370896/1‑84 (MQ=255)
                                                                                            gatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCggg                                                                  <  1:2143494‑M1/76‑1 (MQ=255)
                                                                                            gatcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCggg                                                                  >  2:2143494‑M1/58‑133 (MQ=255)
                                                                                             atcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTgg                                                                         <  2:4483873‑M1/69‑1 (MQ=255)
                                                                                             atcaagcgagcgtccatgacgactcctaacaatctcagttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTgg                                                                         >  1:4483873‑M1/57‑125 (MQ=255)
                                                                                                  agcgagcgtccatgacgactcctaacaatctcagttttttggggccgcttgGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCtgtg                                                                          <  2:4756796‑M1/68‑1 (MQ=255)
                                                                                                   tgggggGTGTGTCGGTTCTTTTCTGTTCAGCGCCCCGGGGGGGCCGCTGGGCGCCCCGCCGGGGGCTTGCCGGTCCCCCCCGGTCCCCATGAGCCCCCGGCTGAACGCACGCCGTGTGGGCGCGGCCACCCCCGCGGAGGGGCGCGCAGc                                          <  2:3050603/150‑1 (MQ=255)
                                                                                                     gtggGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCtgt                                                                           <  1:3086980/115‑1 (MQ=255)
                                                                                                     gtggGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAAAGCAAGCCCtgt                                                                           >  2:3086980/1‑115 (MQ=255)
                                                                                                     gggggTCTGTCTGTACATTACCGGTCAGCGCCAAGCGGGGGCCGCTTGGCGCCCCCCCGGGGGCTTGCCGGGACCCCCCGGTACAGCTTCGCCCCCGGATGACCGCACGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCgg                                        <  2:3607188/148‑1 (MQ=255)
                                                                                                          tctgtctgTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCGTGCCCCGTGCCAAACGTACACCAAAGCCCCCGGCTGAACGCAAACCCAGTGGGAGCGGGCAACCCCCCCGCGGGGCGCCCCGCGGccccc                                   >  2:1682140/1‑150 (MQ=255)
                                                                                                                tgtTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCCTTACCACACGTACAGCGGAGCCCCCGGCGGGACGCCAGCCCAGTGGGAGCGGGCCAGCCCGCGGCGGGGCGCGCCCCGGCCCCCcaaaaa                             >  2:3885724/1‑150 (MQ=255)
                                                                                                                tgtTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCGTGCCCCTTCACACAGGTAAAGCATAGCCCCACGCTGGACGCAAGCCCAGGTGGTGCGGGCAACCCCCCCGAGGGGCGCGCCCCGGCCCCCaaaaaa                             >  2:3885740/1‑150 (MQ=255)
                                                                                                                            ttGTTCGCCAGGGGGGGGCCTCTTGGCGGCCCTCGGCGGGTTTGCCCGTTCCCACTGTTCCTGCTGAGCCCCTGGCTTAAGGCACGCCTGGTGGTTGGGGTAAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTa                 <  2:2720670/150‑1 (MQ=255)
                                                                                                                                   ttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCtgtg                                                                          <  2:3125123‑M1/68‑1 (MQ=255)
                                                                                                                                   ttttttgggggccgctgcGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCtgtg                                                                          >  1:3125123‑M1/19‑86 (MQ=255)
                                                                                                                                           gggCGGCTTGGCGCCCCGCGGGGGGGTTGCCGGTGCCCACCGGTACCGCTTCGCCCCCGGCTGACCGCACGCCCGGGGGGAGCGGGCACGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGAc  <  2:3994041/150‑1 (MQ=255)
                                                                                                                                                gCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCTTGCCcgctc                                                       <  2:1235941/92‑3 (MQ=255)
                                                                                                                                                     |                                                                                                                                           
GCTTGTATGACAGGCGATTGGTGAACTTGATATCCATGAGTCCCGAGCCGGTTTCCCGTTCCTTGCGCTGCGCAAGCATAGCCGAATAGCCCCGGCTGCTGGTGGGTCTGTCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACGCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGAC  >  NC_002947/2101776‑2102064

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.