New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2260024	NA (NA)	8 (0.050)	5/252	NT	9.1%	intergenic (+114/‑278)	PP_1990/asd	transposase/aspartate‑semialdehyde dehydrogenase
	?	NC_002947	= 2260117	85 (0.520)					intergenic (+207/‑185)	PP_1990/asd	transposase/aspartate‑semialdehyde dehydrogenase

ACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATC  >  NC_002947/2259962‑2260165                                                               |                                                                                                                                              aCCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACGCCCGCCGTGCTCCCCGCAGGACCGCGCCGAAGGCCCCAACCTGGGGCCGCAGCGCGTGACGGGCAGCCGTGCCCCTCACCAGCCTCCGC                                                        <  2:928304‑M2/150‑1 (MQ=255)   cAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAA                                                      <  2:3318282‑M2/150‑1 (MQ=255)   cAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTAGCTAACGGCAGGAACGCGCCGAATGCCCCATACTGGGGCCTCAGCGGTTTAAGGGGATACATTCCCGTCACCTTCCTCCGCAA                                                      <  2:3649966‑M2/150‑1 (MQ=255)   cAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACACCGGCCATGCTCCCCGCAGGACCGCGCCGAACGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCAACCAAGCCCGTCACCTGCCTCCGCAA                                                      <  2:5140463‑M2/150‑1 (MQ=255)   cAAAAAACGCTGCGCTCCCATCATCCGGCCCCGGCGCTGCGCTCCGGGGTCCCCTCACGCCCGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCAACCTGGGGCCTCACCGCGTGACGGGCATCCAAGCCCGTCACCAGCCGCCGCca                                                      <  2:1262117‑M2/150‑3 (MQ=255)    aaaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAG                                                     >  1:3192361‑M2/1‑150 (MQ=255)    aaaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAG                                                     <  2:5322134‑M2/150‑1 (MQ=255)    aaaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCGCACTCCGGCCGTGCTCCCGGCAGGACCGCGCCGAAGGCCCCAACCGGGGGCCGCAGCGCTTGACGGGCCTCCAAGCCCGTCACCAGCCTCCGCAAG                                                     <  1:3983278‑M2/150‑1 (MQ=255)      aaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGC                                                   >  1:4809728‑M2/1‑150 (MQ=255)                                cccTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAG                                                     >  1:2081199‑M2/1‑122 (MQ=255)                                cccTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAG                                                     <  2:2081199‑M2/122‑1 (MQ=255)                                                       ccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATGCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCggagtgaggggaccccggagcgcagcgcaggggccggatgatgggagc  <  2:3638969‑M2/150‑49 (MQ=255)                                                               |                                                                                                                                              ACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATC  >  NC_002947/2259962‑2260165

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.