New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 570072157 (0.350)14 (0.100) 11/234 NT 20.5% intergenic (+33/‑134) hslU/PP_5002 protease HslVU ATPase subunit/hypothetical protein
?NC_002947 = 5700770 59 (0.410)intergenic (+82/‑85) hslU/PP_5002 protease HslVU ATPase subunit/hypothetical protein

Only 100 of 117 total aligned reads displayed.

GCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCT  >  NC_002947/5700572‑5700869
                                                                                                                                                      |                                                                                                                                                    
gCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGC                                                                                                                                                      <  1:2682423‑M1/150‑1 (MQ=255)
  gggCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTc                                                                                                                                                    <  1:348000/150‑1 (MQ=255)
    gCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCCACCCCCCTcca                                                                                                                                                  >  2:2572226/1‑149 (MQ=255)
    gCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCt                                                                                                                                                  <  1:5188794/150‑1 (MQ=255)
      gACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGc                                                                                                                                                <  2:2869157/150‑1 (MQ=255)
      gACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGc                                                                                                                                                >  1:2232658/1‑150 (MQ=255)
                 cACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGccacca                                                                                                                                     <  2:1351697/150‑1 (MQ=255)
                      aTGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCtcctgcacggatcaccacaggc                                                                                                                                >  2:2022197‑M1/1‑128 (MQ=255)
                          cGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTg                                                                                                                            <  1:4724298/150‑1 (MQ=255)
                          cGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTg                                                                                                                            <  1:2047113/150‑1 (MQ=255)
                          cGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTg                                                                                                                            <  2:1340712/150‑1 (MQ=255)
                           gAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGccacca                                                                                                                                     >  2:5164438/1‑140 (MQ=255)
                           gAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGccacca                                                                                                                                     <  1:5164438/140‑1 (MQ=255)
                           gAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTgg                                                                                                                           <  1:558611/150‑1 (MQ=255)
                           gAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTgg                                                                                                                           <  1:1672163/150‑1 (MQ=255)
                           gAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTgg                                                                                                                           <  2:2232658/150‑1 (MQ=255)
                           gAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTgg                                                                                                                           <  1:4216128/150‑1 (MQ=255)
                             aGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGc                                                                                                                         <  2:5368641/150‑1 (MQ=255)
                             aGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGc                                                                                                                         <  2:226303/150‑1 (MQ=255)
                               cgcCGATCCAGATCGTCGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCAAAGAACGAAGACCTGTCGCGTTACTTTCTGTAAGACCGGTTT‑CGACAGTTTGGCTGGGAAGCCCGCccccgcacggatcaccacaggcccatgggtt                                                                                                                       <  1:4394824‑M1/150‑32 (MQ=255)
                                 ccGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCCCAACCCTTGGGCCtgt                                                                                                                     <  2:843997/150‑1 (MQ=255)
                                 ccGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCtgt                                                                                                                     <  2:3166210/150‑1 (MQ=255)
                                 ccGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCtgt                                                                                                                     <  1:4294551/150‑1 (MQ=255)
                                  cGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCccccgcacggatcaccacaggcccaagggttgtg                                                                                                                    <  2:3664785‑M1/150‑35 (MQ=255)
                                  cGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCtgtg                                                                                                                    <  1:3599084/150‑1 (MQ=255)
                                  cGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCtgtg                                                                                                                    <  1:1144990/150‑1 (MQ=255)
                                   gATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTgtgg                                                                                                                   <  2:362352/150‑1 (MQ=255)
                                   gATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTgtgg                                                                                                                   <  1:1247360/150‑1 (MQ=255)
                                   gATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTgtgg                                                                                                                   <  1:1247323/150‑1 (MQ=255)
                                     tCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTgtggtg                                                                                                                 <  2:2912483/150‑1 (MQ=255)
                                       cAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCtcctgcacggatcaccacaggcccaagggttgtggtggc                                                                                                               <  1:2022197‑M1/150‑40 (MQ=255)
                                         gATCGACGCGGCATATGTGAACCGCCACCTGGGTGAGCTGGCACAGAACGCAGACCGGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCtcctgcacgcgccaccccaggcccaagggttgtggtggcgc                                                                                                             <  2:2644180‑M1/150‑42 (MQ=255)
                                               cgcgGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCgg                                                                                                       <  2:4386065/150‑1 (MQ=255)
                                                 cggcgTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcagga                                                                                                     <  2:1095031‑M1/150‑50 (MQ=255)
                                                 cggcgTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCgggg                                                                                                     <  1:1460785/150‑1 (MQ=255)
                                                 cggcgTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGGTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCgggg                                                                                                     <  1:2032371/150‑1 (MQ=255)
                                                   gCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgc                                                                                                   >  1:3766111‑M2/1‑148 (MQ=255)
                                                   gCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgc                                                                                                   >  1:1198048‑M2/1‑148 (MQ=255)
                                                   gCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgc                                                                                                   >  1:940966‑M2/1‑148 (MQ=255)
                                                    cgTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcg                                                                                                  <  2:1607712‑M1/150‑53 (MQ=255)
                                                     gTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgg                                                                                                 <  2:3617077‑M1/150‑54 (MQ=255)
                                                      tATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgcggg                                                                                                >  1:4938381‑M2/1‑145 (MQ=255)
                                                      tATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgcggg                                                                                                <  1:1311098‑M2/150‑6 (MQ=255)
                                                      tATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgcggg                                                                                                >  1:2203543‑M2/1‑145 (MQ=255)
                                                       aTGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgcgggc                                                                                               >  2:3373072‑M2/1‑144 (MQ=255)
                                                         gtgAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgggctt                                                                                             <  2:2011563‑M1/150‑58 (MQ=255)
                                                           gAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgcgggcttgc                                                                                           >  2:418626‑M2/1‑140 (MQ=255)
                                                           gAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgcgggcttgc                                                                                           >  1:461153‑M2/1‑140 (MQ=255)
                                                            aaCAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgcgggcttgcc                                                                                          >  1:734502‑M2/1‑139 (MQ=255)
                                                             aCAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTGGGGCCTGTGGTGATCCGTGCGGGGgcgggcttgccc                                                                                         >  1:3354560‑M2/1‑138 (MQ=255)
                                                              cAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgggctt                                                                                             >  1:851049‑M1/1‑88 (MQ=255)
                                                              cAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgggctt                                                                                             <  2:851049‑M1/145‑58 (MQ=255)
                                                                 ccACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgcgggcaagcccgccc                                                                                     >  1:1548838‑M2/1‑134 (MQ=255)
                                                                   aCCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTGGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAag                                                                                   <  1:3113938/150‑1 (MQ=255)
                                                                    ccTGGGTGAGCTGGCACAGAACGAAGACCTGTCGGGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTTTGGTGATCCGTGGGGGGGCGGGCTTGCCCGCGAaga                                                                                  <  2:3741497/150‑1 (MQ=255)
                                                                      tGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCgg                                                                                                       <  2:4291651/127‑1 (MQ=255)
                                                                      tGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCgg                                                                                                       >  1:4291651/1‑127 (MQ=255)
                                                                                      gAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACACCCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAAtccctccc                                                                <  2:398350/150‑1 (MQ=255)
                                                                                               gcTGTCGGTTTACATTGTTTATGACGGTTTT‑CGAATGTTTGGCGGGAATGCCGGCTCCTGCAGGGGCCACCACAACCGGTGGGCCTGTGGTGTTGCGTGGGGGGGGGGGGTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCt                                                       <  1:4846080/149‑1 (MQ=255)
                                                                                                       gTTACTTTCTTTAAGACGGGTTT‑GGACTGTTTCGCGGGCATGCCCGCTCCTGCACGCGCCACCACAACCATTGGGCGTGTGGTTTTCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCtg                                               <  2:231172/150‑1 (MQ=255)
                                                                                                           cATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACACCCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCt                                           <  2:3335446/150‑1 (MQ=255)
                                                                                                               cTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTGGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTccat                                       <  2:1721480/150‑1 (MQ=255)
                                                                                                                ctgtactccGGTTTCCGACAGTTGGGGGGGCACCCCGGCCCGGGCCCGCCCCACCAAACCCCGGGGGCCGGGGGTGACCGGGGGGGGGGCGGGGTGGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTtcat                                       <  1:2887004/143‑1 (MQ=255)
                                                                                                                 gTATGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCGTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTtcatca                                     <  2:3434903/150‑1 (MQ=255)
                                                                                                                 gTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCCCACCCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTtcatca                                     <  2:4710398/150‑1 (MQ=255)
                                                                                                                 gTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACACCCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTtcatca                                     <  1:4871708/150‑1 (MQ=255)
                                                                                                                     gACCGGTTT‑CGACTGTTGCGCGGGCAAGCCCGCTCCTGCACGCGCCACCCCAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTc                                 <  1:4060187/150‑1 (MQ=255)
                                                                                                                     gACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCCCGCCAGCACCCGCCACCACAAACCAAGGGGCGGTGGTGTTCCCGGCGGGGGCGGGCGTGCCCCCGCAAAGGCCCATTTATCCCACCCCCAAAAACAGGAAACAGTGCGtcaaaaccac                                 >  2:1302565/1‑143 (MQ=255)
                                                                                                                               cGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgcg                                                                                                  >  2:4477155‑M2/1‑73 (MQ=255)
                                                                                                                               cGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgcg                                                                                                  <  1:4477155‑M2/76‑4 (MQ=255)
                                                                                                                                gccAGTTTCGCGGGCACGCCCGCACCGCCACGCGCCACCACACCCCTTGGGCCTGTGGTTAACCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGAtt                       <  1:3603861/148‑1 (MQ=255)
                                                                                                                                   aGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCCCCACCACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATCAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTg                    <  2:4404405/150‑1 (MQ=255)
                                                                                                                                       tCGCGGGCAAGCCCGCTCCTGCCCGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCa                <  2:1428562/150‑1 (MQ=255)
                                                                                                                                       gggcgggCTTGCCCGCccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgccagctcacccaggtgg                >  1:1548838‑M1/3‑16 (MQ=255)
                                                                                                                                           gggCAAGCCCGCccccgcacggatcaccacaggccccagggttgtggtggcgcgtgcaggagcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgccagctcacccaggtggctgt            >  1:3354560‑M1/1‑12 (MQ=255)
                                                                                                                                            ggCAAGCCCGCccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgccagctcacccaggtggctgtt           >  1:734502‑M1/1‑11 (MQ=255)
                                                                                                                                             gCAAGCCCGCccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgccagctcacccaggtggctgttc          >  2:418626‑M1/1‑10 (MQ=255)
                                                                                                                                             gCAAGCCCGCccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgccagctcacccaggtggctgttc          >  1:461153‑M1/1‑10 (MQ=255)
                                                                                                                                              cAAGCCCGCccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgccagctcacccaggtggctgttca         >  2:2246875‑M1/1‑9 (MQ=255)
                                                                                                                                               acgCCCGCTCCTCCCCGCGCCACCACACCCCGTGGGCGTGTGGTTAGCGGTGGGGGGGCGGGGTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCgc        <  1:88075/148‑1 (MQ=255)
                                                                                                                                               aaGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgccagctcacccaggtggctgttcac        <  2:2011563‑M2/150‑94 (MQ=255)
                                                                                                                                               aaGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgccagctcacccaggtggctg             <  2:851049‑M2/145‑89 (MQ=255)
                                                                                                                                               aaGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgccagctcacccaggtggctg             >  1:851049‑M2/1‑57 (MQ=255)
                                                                                                                                                 gcccgcccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgccagctcacccaggtggctgttcacat      >  2:3373113‑M1/1‑6 (MQ=255)
                                                                                                                                                 gcccgcccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgccagctcacccaggtggctgttcacat      >  2:3373072‑M1/1‑6 (MQ=255)
                                                                                                                                                 gCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCgcct      <  2:4046068/150‑1 (MQ=255)
                                                                                                                                                 gCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCgcct      >  1:4256572/1‑150 (MQ=255)
                                                                                                                                                 gCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCAAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCgcct      >  1:3502301/1‑150 (MQ=255)
                                                                                                                                                 gCCCGCTCCTGCACGCGCCACCACAACCCTTGCGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCgcct      <  2:4046019/150‑1 (MQ=255)
                                                                                                                                                  cccgcccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgccagctcacccaggtggctgttcacata     >  1:2203543‑M1/1‑5 (MQ=255)
                                                                                                                                                  cccgcccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgccagctcacccaggtggctgttcacata     <  1:1311098‑M1/150‑146 (MQ=255)
                                                                                                                                                  cccGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCgcctg     >  1:1000150/1‑150 (MQ=255)
                                                                                                                                                   ccGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgccagctcacccaggtggctgttcacatac    <  2:3617077‑M2/150‑98 (MQ=255)
                                                                                                                                                   ccGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCgcctgc    >  2:3309343/1‑150 (MQ=255)
                                                                                                                                                    cgcccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgggcttgcccgcgaaactgtcg                                                                             >  2:4477155‑M1/1‑3 (MQ=255)
                                                                                                                                                     gcccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgccagctcacccaggtggctgttcacatacgc  >  1:940966‑M1/1‑2 (MQ=255)
                                                                                                                                                     gcccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgccagctcacccaggtggctgttcacatacgc  >  1:3766111‑M1/1‑2 (MQ=255)
                                                                                                                                                     gcccccgcacggatcaccacaggcccaagggttgtggtggcgcgtgcaggagcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgccagctcacccaggtggctgttcacatacgc  >  1:1198048‑M1/1‑2 (MQ=255)
                                                                                                                                                     gCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGgcgggcttgcccgcgaaactgtcgaaaccggtcttacagaatgtaacgcgacaggtcttcgttctgtgccagctcacccaggtggctgttcacatacgc  <  1:3487822‑M2/150‑100 (MQ=255)
                                                                                                                                                     gCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCgcctgcct  >  2:4962075/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
GCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTT‑CGACAGTTTCGCGGGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGCTTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTGCCCATGGCCCGCCTGCCT  >  NC_002947/5700572‑5700869

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.