BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5758636 =	110 (0.670)	11 (0.070)	7/250	NT	8.9%	intergenic (+335/‑353)	glnG/PP_5050	two‑component system DNA‑binding response regulator GlnL/GlnG/transposase
*	?	NC_002947	5758710 =	123 (0.800)	11 (0.070)	7/250	NT	8.9%	intergenic (+409/‑279)	glnG/PP_5050	two‑component system DNA‑binding response regulator GlnL/GlnG/transposase

Only 100 of 153 total aligned reads displayed.

TGCTGCCGCCACCGTATTCGCGGGTAAACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCT  >  NC_002947/5758487‑5758785

  tacggtctgtactgcgcgaacagtcagaagcgagttatggccctcctcctcccttcaagtcctaccatacaagcgggtttacccgcgaatacggtggtggcggcaacgctgaacggcaggtggagattggccagcaggcccggcctcTTc                                                                                                                                                     >  2:2008614‑M1/148‑150 (MQ=255)

  tacggtctgtactgcgcgaacagtcagaagcgagttatggccctcctcctcccttcaagtcctaccatacaagcgggtttacccgcgaatacggtggtggcggcaacgctgaacggcaggtggagattggccagcaggcccggcctcTTc                                                                                                                                                     <  1:5121540‑M1/3‑1 (MQ=255)

    gccgccTCCGTATGCGCGGGCAATCCCGCGCCTACCGCGGCGGTGGGCACAGATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTcgc                                                                                                                                                   <  2:312837/150‑1 (MQ=14)

    gccgccCCCGTCTTCGCGGGTAAACCCGCGCCTCCCCCGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTcgc                                                                                                                                                   <  2:1002024/150‑1 (MQ=255)

    gccgccACCGTATTCGCGGGTAAACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTcgc                                                                                                                                                   <  2:4185318/150‑1 (MQ=255)

    gcccgcACCGTATTGTAGTGTAATGCCGCGCCTCCATATGCGGTGGTCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTcgc                                                                                                                                                   <  1:2703464/145‑1 (MQ=14)

      gtctgtactgcgcgaacagtcagaagcgagttatggccctcctcctcccttcaagtcctaccatccaagcgggtttacccgcgaatacggtggtggcggcaacgctgaacggcaggtggagattggccagcaggcccggcctcTTCGCgg                                                                                                                                                 >  2:928092‑M1/144‑150 (MQ=255)

      gtctgtactgcgcgaacagtcagaagcgagttatggccctcctcctcccttcaagtcctaccatacaagcgggtttacccgcgaatacggtggtggcggcaacgctgaacggcaggtggagattggccagcaggcccggcctcTTCGCgg                                                                                                                                                 >  2:877152‑M1/144‑150 (MQ=255)

      gtctgtactgcgcgaacagtcagaagcgagttatggccctcctcctcccttcaagtcctaccatacaagcgggtttacccgcgaatacggtggtggcggcaacgctgaacggcaggtggagattggccagcaggcccggcctcTTCGCgg                                                                                                                                                 >  2:4190764‑M1/144‑150 (MQ=255)

      gtctgtactgcgcgaacagtcagaagcgagttatggccctcctcctcccttcaagtcctaccatacaagcgggtttacccgcgaatacggtggtggcggcaacgctgaacggcaggtggagattggccagcaggcccggcctcTTCGCgg                                                                                                                                                 >  2:2321255‑M1/144‑150 (MQ=255)

      gtctgtactgcgcgaacagtcagaagcgagttatggccctcctcctcccttcaagtcctaccatacaagcgggtttacccgcgaatacggtggtggcggcaacgctgaacggcaggtggagattggccagcaggcccggcctcTTCGCgg                                                                                                                                                 >  1:3299013‑M1/144‑150 (MQ=255)

      cggctccGTATGCGCGGGCAAACCCGCGCCTACCCCTGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCgg                                                                                                                                                 <  2:4174943/145‑1 (MQ=17)

      cgccACCGTATTCGCGGGTACACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCgg                                                                                                                                                 <  2:4738013/150‑1 (MQ=255)

      cgccACCGTATTCGCGGGTAAACCCGCGCCTACCCCGGCGGTGGGCACAGATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCgg                                                                                                                                                 <  1:3940995/150‑1 (MQ=255)

      cgccACCGTATTCGCGGGTAAACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGGTCAGCGTTGCCGCCGCCACCGTATTCGCgg                                                                                                                                                 >  2:1591966/1‑150 (MQ=255)

      cgccACCGTATTCGCGGGTAAACCCGCGCCTACCACGGCGGTCGCCACATAGCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCGGCTGGCCCATCTCCACCGGCCGTGCAGCGGTGCCGCCGCCACCGTGttggggg                                                                                                                                                 >  1:1555913/1‑145 (MQ=14)

       gccACCGTATTCGCGGGTAAACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCggg                                                                                                                                                <  2:5404265/150‑1 (MQ=255)

       gccACCGTATTCGCGGGTAAACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCggg                                                                                                                                                >  1:1649763/1‑150 (MQ=255)

       gccACCGTATTCGCGGGTAAACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCggg                                                                                                                                                >  1:4596657/1‑150 (MQ=255)

        ccACCGGACGCGCGGGCCATCCCGCGCCGGCCGCGGCGGTGGCCACAGATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGt                                                                                                                                               <  2:2635047/150‑1 (MQ=14)

          aCCGTATTCGCGGGTAAACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTACACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTaa                                                                                                                                             >  2:4593212/1‑150 (MQ=255)

               aggcgcgGGTTTACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAAACCg                                                                                                                                        >  1:4814984/4‑150 (MQ=255)

                 tCGCGGGTAAACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCt                                                                                                                                      <  2:5212523/150‑1 (MQ=255)

                 tCGCGGGTAAACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCt                                                                                                                                      >  2:3493846/1‑150 (MQ=255)

                 gcgcgGGTTTACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCgg                                                                                                                                                 >  1:1759716/2‑139 (MQ=255)

                  cgcgGGTAAACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTc                                                                                                                                     <  2:2013847/150‑1 (MQ=255)

                  cgcgGGTAAACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTc                                                                                                                                     >  1:4809595/1‑150 (MQ=255)

                   gcgGGTAAACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTcc                                                                                                                                    <  1:3410610/150‑1 (MQ=255)

                   ccgGGTAAACCCGCGCCTACCACTGCGGTGGCCACATATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTcc                                                                                                                                    <  2:5388159/149‑1 (MQ=255)

                      ggTAAACCCGCGCCTCCCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTAc                                                                                                                                 <  1:3466242/150‑1 (MQ=255)

                       gTAAACCCGCGCCTACCACGGCGGTGCGAACATAACGGGGTCGTCGTAGGAGCGGGTTAACCCGCCAACAGGCCGCGCCTGCTGGCAAATCTCCACCTGCCGTTCAGCTTTCCCGCCACCACCGTATGCGCGGGTAAACCCGCTGCTAcc                                                                                                                                >  2:3817059/1‑150 (MQ=14)

                             ccGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCg                                                                                                                          >  2:1283462/1‑150 (MQ=255)

                              cgcgCCTCCCCCGGCGGTGGGCACATCTCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGt                                                                                                                         <  1:5266985/150‑1 (MQ=255)

                              cgcgCCTCCCCCGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGGTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCGCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGt                                                                                                                         <  2:3346314/150‑1 (MQ=255)

                                 gcCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGa                                                                                                                      <  1:3839556/150‑1 (MQ=255)

                                 gcCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCCCTCCTACCACGGCGTGGa                                                                                                                      >  1:2841344/1‑150 (MQ=255)

                                    tcccccggcggTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGacac                                                                                                                   <  1:5009731/145‑1 (MQ=255)

                                    tACCCCGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGacac                                                                                                                   <  1:5009779/150‑1 (MQ=255)

                                       cACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGGGGAcaccca                                                                                                                >  2:2890135/1‑150 (MQ=255)

                                        aCGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGTCACACAt                                                                                                               >  2:5076700/1‑150 (MQ=255)

                                           gcggTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATcgc                                                                                                            <  1:927508/150‑1 (MQ=255)

                                           cctcctcctcccttcaagtcctaccatacaagcgggtttacccgcgaatacggtggtggcggcaacgctgaacggcaggtggagattggccagcaggcccggcctcTTCGCGGGTTCACccgcgaa                                                                                                                                    <  2:4818184‑M1/20‑4 (MQ=255)

                                             ggTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCgg                                                                                                          <  2:4318626/150‑1 (MQ=255)

                                              gTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGgt                                                                                                         <  1:4593212/150‑1 (MQ=255)

                                                tcctcccttcaagtcctaccatacaagcgggtttacccgcgaatacggtggtggcggcaacgctgaacggcaggtggagattggccagcaggcccggcctcTTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGgtcg                                                                                                       <  2:5093017‑M1/49‑1 (MQ=255)

                                                   tcccttcaagtcctaccatacaagcgggtttacccgcgaatacggtggtggcggcaacgctgaacggcaggtggagattggccagcaggcccggcctcTTCGCgg                                                                                                                                                 >  2:1641317‑M1/99‑105 (MQ=255)

                                                   tcccttcaagtcctaccatacaagcgggtttacccgcgaatacggtggtggcggcaacgctgaacggcaggtggagattggccagcaggcccggcctcTTCGCgg                                                                                                                                                 <  1:1641317‑M1/7‑1 (MQ=255)

                                                   cacaTATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCTCGGtcgtcg                                                                                                    >  2:3965592/1‑150 (MQ=255)

                                                   cacaTATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGtcggcg                                                                                                    >  2:2127268/1‑150 (MQ=255)

                                                    acaTATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGGAAAACCCCACCGACCACGGCGTGGACACACAACGCGGTcggcgt                                                                                                   >  1:4145679/1‑150 (MQ=17)

                                                     caTATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCTTTCAGCGTTGCCGCCGCCACCGTATTAGCGGGTAAACCCGCTCCTACCACGGGGTGGACACACATCGCGGTCGTCGTa                                                                                                  <  2:3438439/150‑1 (MQ=255)

                                                     caTATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTa                                                                                                  <  2:1544042/150‑1 (MQ=255)

                                                        atCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGa                                                                                               <  1:871530/150‑1 (MQ=255)

                                                          aagtcctaccctccaagcgggttgacccgcgaatccggtggtggcggcaacgcggaccggcaggtggagattggccagcaggcccggcctcTTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACCCACATCGCGGTCGTCGTAGGAGc                                                                                             >  2:281938‑M1/92‑150 (MQ=255)

                                                          aagtcctaccatacaagcgggtttacccgcgaatacggtggtggcggcaacgctgaacggcaggtggagattggccagcaggcccggcctcTTCGCGGGTGAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGc                                                                                             >  1:5133304‑M1/92‑150 (MQ=255)

                                                            gtcctaccatacaagcgggtttacccgcgaatacggtggtggcggcaacgctgaacggcaggtggagattggccagcaggcccggcctcTTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCgg                                                                                           >  1:4877730‑M1/90‑150 (MQ=255)

                                                              gtcgtcGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGGGGAAACACATCGCGGTCGGCGTAGGAGCcgga                                                                                         >  2:4536724/1‑149 (MQ=255)

                                                                    gtAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCAccc                                                                                   <  1:4054293/150‑1 (MQ=255)

                                                                     tAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCACCAAACACGGCGTTGACACACATAGCGGTCGTCGTAGGAGCGGGTTCACAcg                                                                                  >  1:1240601/1‑150 (MQ=17)

                                                                        gAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCCGGGGCACCCATCGCGGTCGTCGTAGGAGCGGGTTCACCcgcgg                                                                               >  2:2363259/1‑149 (MQ=255)

                                                                         agcgggtttacccgcgaatacggtggtggcggcaacgctgaacggcaggtggagattggccagcaggcccggcctcTTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGaa                                                                              >  1:3309249‑M1/77‑150 (MQ=255)

                                                                          gCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTACTACCCAGGCGGGGGAACGCATCGCGGGCGCCGGAGGACCCGGGTCACCcgccgcg                                                                             >  1:3590437/1‑146 (MQ=14)

                                                                           cGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAaga                                                                            <  2:2841344/150‑1 (MQ=255)

                                                                           cGGGCTCACCCGCGACGAGGCCGCGCCTGCCGGCCAACCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGGAAACCCGCTCCTACCACGGCGTGGACACCCACCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAaga                                                                            <  2:2994140/150‑1 (MQ=17)

                                                                            gggTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAagag                                                                           >  2:3245453/1‑150 (MQ=255)

                                                                            gggTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAagag                                                                           <  1:4302127/150‑1 (MQ=255)

                                                                                 cACCCGCGAAGAGGACTCGCCTGCTTGCCAATCTCCACCTGACCTTCATAGTTGAAGCCGACACCGTATTCGCGGGTAAACCCTCTCATACCACGGCGTGGACACAAATCGCGGTCGTCTTAGGAGCGGGTTCACCCGCGAAGAGTCCgt                                                                      <  2:4941938/150‑2 (MQ=14)

                                                                                   cccGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTAACCCGGCGTGGGCACACCTCGGGGTCGTCGTAGGAGCCGGGTCACCCGCGAAGAgggcgggc                                                                    >  2:2443614/1‑150 (MQ=14)

                                                                                     cgcgaatacggtggtggctgcaacgctgaacggcaggtggagattggccagcaggcccggcctcTTcgc                                                                                                                                                   >  1:3143453‑M1/65‑69 (MQ=255)

                                                                                     cgcgaatacggtggtggcggcaacgctgaacggcaggtggagattggccagcaggcccggcctcTTcgc                                                                                                                                                   <  2:3143453‑M1/5‑1 (MQ=255)

                                                                                          agagGCCGCGCCTGCTGGCCACTCTCCACCTGCCGGTCAGCGTTGCCGCCGCCACCGTATGCGCGGGTAAACCCGCTCCTCCCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTgg                                                             <  2:1265960/150‑1 (MQ=255)

                                                                                               ccGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTAACACGGCGAGGACACACATCGCGGGCGGCGTAGGGGCGGGGTCACCCGCGGAGAGGCCGGGCCGGCTGGCCaaa                                                        >  1:4312090/1‑149 (MQ=17)

                                                                                                 gcgcCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTACTACCACGGCGGGGGAACGCATCGCGGTCGGCGTAAGAGCCGGCTCACCCTCCGAGACGGCCGGCCAGCAGGCCAAtga                                                      >  2:1843514/1‑148 (MQ=14)

                                                                                                      tgctgGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCGGCTGGCCAATCTCCAcc                                                 >  1:5353804/1‑150 (MQ=255)

                                                                                                         tgGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCgg                                                                                                                                                 <  2:3471237/51‑1 (MQ=35)

                                                                                                         tgGCCAACCCCCCCCGGCCGTCCACCGTGGCGCCCGCCACGGTATTGGGGGTTAAACCCGGGCCTCCCAGGGGGTGGACACACATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGc                                              <  2:4630972/150‑1 (MQ=11)

                                                                                                           gCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAAACCGCTCCTACCAAGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGGTCACCCGCGAAGAGGCCCGGCCTGCAGGCCAAAAACCACCTGCCg                                            >  2:5167296/1‑150 (MQ=17)

                                                                                                               tgaacggcaggtggagattggccagcaggcccggcctcTTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGtcgtcg                                                                                                    >  1:1726435‑M1/39‑90 (MQ=255)

                                                                                                               tgaacggcaggtggagattggccagcaggcccggcctcTTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGtcgtcg                                                                                                    <  2:1726435‑M1/52‑1 (MQ=255)

                                                                                                                tctcCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCAAGGCGTGGACACACATCGCGGGCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCACCACCTGCCGTTCAg                                       >  2:2535022/1‑150 (MQ=255)

                                                                                                                  tcCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCgg                                                                                                                                                 >  2:2517036/1‑42 (MQ=38)

                                                                                                                    cACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTcgc                                                                                                                                                   >  1:4456670/1‑38 (MQ=40)

                                                                                                                    cACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTACTACCAAGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGtt                                   >  2:3489285/1‑150 (MQ=255)

                                                                                                                       cTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAAACCCCTCCTACCACCGCGTGGGCACCCAACCCGGTGGTCGTTGGAGCGGGTTCACCCGCGAAGACGCCGGGCCTGCGGGCCAAAAACCACCAGCCCGTAAGCGTTgcc                                >  1:3397809/1‑150 (MQ=14)

                                                                                                                          ccGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATcgcg                                                                                                           <  1:4627601/72‑1 (MQ=255)

                                                                                                                            gTTCAGCGTTGCCGCCGCCACCGTTTTCGCGGGTAAACCCGCTCCTACCCCGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGccac                           <  2:2829793/150‑1 (MQ=255)

                                                                                                                            gTTCAGCGTTGCCGCCGCCACCGTATTCGCGGTTAAACCGGCTCCTACCCCGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGccac                           <  2:103263/150‑1 (MQ=255)

                                                                                                                            gTTCAGCGTCGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTTCCACGGGTTGGTACCTCATAGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGccac                           <  1:3884598/150‑1 (MQ=14)

                                                                                                                             ttCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGccacc                          >  2:2229770/1‑150 (MQ=255)

                                                                                                                             ttCAGCGTTGCCGCCGCCACCGTATTCGCGGGGAAACCCCCGCCGACCACGGCGGGGCCCCACAGCGCGGGCGGCGGTGGGGCGGGGTCACCCGCGCAGAGGCCGGGCCGGCGGGCCAAACGCCACCCGCCCTTCAGCGGTGCCGccccc                          >  1:2449779/1‑150 (MQ=9)

                                                                                                                                aGCGTTGCCGCCGCCACCGTATTCGCGGGTAAAACCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCaccacc                       >  2:71759/1‑150 (MQ=255)

                                                                                                                                       ccgccgccACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCAGCCCTTCAGCGTTGCCGCCACCACCGTATTcg                >  1:2715305/1‑150 (MQ=255)

                                                                                                                                          ccgccACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCgg             <  2:4145679/150‑1 (MQ=255)

                                                                                                                                          ccgccACCGTATCCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGACGCCACCACCGTATTCGCgg             <  2:1555913/150‑1 (MQ=255)

                                                                                                                                           cgccACCGTATTCGCGGTTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCggg            <  2:264182/150‑1 (MQ=255)

                                                                                                                                                ccGTATTCGCGCGTAAAACCGCACCTACCACGGCGTGGACACACATCGCCGTCGTAGTAGGAGCCTGAGCACCACCGCAGAGCCCGGGCCCCCTGGCCAATCAAAACCAGCCCTTCACCGTTGCCGCCACCCCCCAATTAGCGCGTAAAc       >  2:3769911/1‑150 (MQ=255)

                                                                                                                                                  gTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGGTCACCCGCGAAGAGGCCGGGCCTGCTGGCCCATCTCCACCTGCCCTTCAGCGTTGCCGCCACCACCGTATTCGCGGGGAAAccc     >  1:2343702/1‑150 (MQ=255)

                                                                                                                                                    aTTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGc   <  1:2939197/150‑1 (MQ=255)

                                                                                                                                                     TTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCt  <  1:3138974‑M1/150‑1 (MQ=255)

                                                                                                                                                     TTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCt  <  2:3988546‑M1/150‑1 (MQ=255)

TGCTGCCGCCACCGTATTCGCGGGTAAACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCT  >  NC_002947/5758487‑5758785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.