| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5872267 | 92 (0.560) | 12 (0.090) | 9/210 | NT | 14.5% | intergenic (+50/+84) | PP_5144/ptsP | hypothetical protein/phosphoenolpyruvate‑dependent regulator |
| ? | NC_002947 | = 5872302 | 70 (0.540) | intergenic (+85/+49) | PP_5144/ptsP | hypothetical protein/phosphoenolpyruvate‑dependent regulator | |||||
Only 100 of 180 total aligned reads displayed.
CACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGT > NC_002947/5872118‑5872414 | cacaGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTAC < 1:1834622‑M1/150‑1 (MQ=255) acaGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCCCACCTACa > 2:3475817/1‑150 (MQ=255) caGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACaa < 1:138041/150‑1 (MQ=255) tGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCt > 2:4081798/1‑150 (MQ=255) gATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTg < 2:903567/150‑1 (MQ=255) aTTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTgg < 2:961388/150‑1 (MQ=255) gtgGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTc < 2:4158404/150‑1 (MQ=255) gtgGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTc < 2:3012732/150‑1 (MQ=255) tgGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTcc < 2:3849482/150‑1 (MQ=255) atgatCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAAc > 2:578955/1‑150 (MQ=255) tgatCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTgg < 1:2873265/142‑1 (MQ=255) tgatCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTgg > 2:2873265/1‑142 (MQ=255) atCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAAcccc < 2:1203500/150‑1 (MQ=255) tCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCa < 1:5107960/150‑1 (MQ=255) cAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAg < 1:3417561/150‑1 (MQ=255) aGGGGCCAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCGTTTGGCGGGCATTTGGGGGAAATTGAGGTGTTGGTCTGAGTATTTGATGGTGTCTGTTCGGGCCTCTTCGCGGGGGGTCCCGCGCCTTCCACGGCCGGGGTCCCAcccccgc > 2:4568984/1‑147 (MQ=255) ggggCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGAt < 2:3193721/150‑1 (MQ=255) ggggCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGAt < 1:1558591/150‑1 (MQ=255) ggggCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGAt > 1:1003197/1‑150 (MQ=255) gggCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGa < 1:4209693/148‑1 (MQ=255) ggCAAAGGCGGCTGGTTGCGCGCCGGTTCGCGCCATATGGCGGGCATTTGGGGGAAATTGCGGTGATGGACTGAGTATTGGAGGTCGTCCGTTCGGGCCACTTCGCGGGAGAACCCGCTCCTACACCGGCCTGGGTCCAACCCCAGAtgt < 1:4782436/150‑1 (MQ=255) ggCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGAtgt < 2:1003197/150‑1 (MQ=255) gCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTTAAACCGCTCCTACAACGGCCAGGGTCCAACCCCAGAagtg > 1:876285/1‑150 (MQ=255) ggcTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTg < 2:4643297/150‑1 (MQ=255) ggcTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGGGACCCCGCTCCGACAACGGCCAGGGGCCCACCCCCGAGGTGTGTACggg > 2:237065/1‑148 (MQ=255) gcTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCt < 1:3344767/122‑1 (MQ=255) gcTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCt > 2:3344717/1‑122 (MQ=255) ttGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACcacgtacacacatctggggttggacccaggccgttgtagga < 1:216544‑M1/150‑42 (MQ=255) ttGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCCCTTCGCGGGTGAACCCGCTCCTACcacgtacacacatctggggttggacccaggccgttgtagga < 2:3846939‑M1/150‑42 (MQ=255) gAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACcacgtacacacatctggggttggacccaggccgttgtaggagc < 2:3997646‑M1/150‑44 (MQ=255) gAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGCTGTTTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcacgtacacacatctggggttggacccaggccgttgtaggagc < 2:3276250‑M1/150‑44 (MQ=255) gcgcAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGgtaggagcgg > 1:4935911‑M2/1‑140 (MQ=255) gcgcAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGgtaggagcgg > 1:3130517‑M2/1‑140 (MQ=255) gcgcAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCGGGGTCCAACCCCAGATGTGTGTACGTGgtaggagcgg < 2:3141240‑M2/150‑11 (MQ=255) cgcAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGgtaggagcggg > 2:261293‑M2/1‑139 (MQ=255) tttCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACcacgtacacacatctggggttggacccaggccgttgtaggagcgggt < 1:5303252‑M1/146‑48 (MQ=255) tttCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACcacgtacacacatctggggttggacccaggccgttgtaggagcgggt > 2:5303252‑M1/1‑99 (MQ=255) ttCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGgta > 1:4020414‑M2/1‑133 (MQ=255) cGGGCCTGTGGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGgtaggagcgggttcacccg > 2:5080602‑M2/1‑131 (MQ=255) ccTTTGGGCGGGCTTTTGGGGTAAATTGAGTTGTTGGTCTGCGTATTTGATGTTGTCTGTTCGGGCCTCTCCGCGGGTGACCCCGCTCCTACAACGGCCTGGGACCAACCCCAGATGTGTGTACGTGgtaggagcgggtccacccgcgaa > 2:4727054‑M2/1‑127 (MQ=255) ttttGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGCTGTTGTCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcccgtacacacatctggggttggaccccggccgtggtcggcgcgggtccacccgcgaaga < 2:5074835‑M1/150‑61 (MQ=255) ttttGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCACCAACAACCGCCTGGGTCCAACCCCAGATGTGTGTACGTGgtaggagcgggttcacccgcgacgc < 2:3525449‑M2/150‑26 (MQ=255) ttttGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGGGTACCCCCGCCCACAACAGCCAGGGGGCAACCCCCCAAGTGGGTAAGGGGTGGGAGCGGGGTCACCCCCCAaga > 1:1109522/1‑150 (MQ=255) ttttGGCGGGAATTTGGGGTAAATTGATTTGTTGGTCTGATTATTTTATTTTGTATGTTCGGGCATCTTCGCGGGTTAACCCGATCCTACAACGGCCTGGTTCAAACCCAAGATGTGTGTACGTGTTAGGAGCGGGTTCACCCGCGAaga < 2:3833784/150‑1 (MQ=255) tGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGgtagga > 2:3867882‑M2/1‑122 (MQ=255) ggCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGTACCCCCACCAACAAAGGCCTGGGTCCAACCCCACAAGTGTGTAAGTGGTAGGAGCCGGTTCACCCCCCAAGAGGCCGGcc > 1:3118724/1‑149 (MQ=255) ggCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACcacgtacacacatctggggttggacccaggccgttgtaggagcgg < 2:2230246‑M1/127‑46 (MQ=255) ggCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACcacgtacacacatctggggttggacccaggccgttgtaggagcgg > 1:2230246‑M1/1‑82 (MQ=255) tGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAAACCCCTCCAACAACGGCCTGGGGCCAACCCCACATGTGTGTACGTGGTAGGAGCGGGTTCACCCCCGAAGAGGCCGGCACaaaaa > 2:3366792/1‑148 (MQ=255) ggggggAATTTGTGTTGTTGGTCTGAGTATTTGTTGTGGTCGGTTCGGGCCTCTGCGGGGGTGACCCCGCTCCAACACGGGCCTGGGTCCAACCCCAGTTGGGTGTACGTGGTCGGCGGGGTTTCACCCGCGAAGAGGCCGGCACAAACa < 2:3118724/149‑1 (MQ=255) ggAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGg > 2:4800102‑M2/1‑107 (MQ=255) ggAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGg < 1:4800102‑M2/108‑2 (MQ=255) tGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGAtgtgt < 2:4578805/94‑1 (MQ=255) tGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGAtgtgt > 1:4578805/1‑94 (MQ=255) ttgttgGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACcacgtacacacatctggggttggacccaggccgttgt < 2:4515172‑M1/99‑38 (MQ=255) ttgttgGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACcacgtacacacatctggggttggacccaggccgttgt > 1:4515172‑M1/1‑62 (MQ=255) gTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGa < 1:5107778/79‑1 (MQ=255) tCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGAtgtgtg < 1:3161094/84‑1 (MQ=255) cTGAGTTGTTGTTGTGTTCGGTGCGGGCCTCTTCGCGGGTGAACCCGCTCCTCCCCCGGCCTGGGTCCAACCCCAGAGGTGTGTAGGTGGTGGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTtta < 2:4846592/150‑1 (MQ=37) tGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGgta > 1:5191027‑M2/1‑88 (MQ=255) tttGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCGCCTACCACGGCCTGGGGGCAAACCCAGCTGGGTGTACGTGGGAGGAGCGGGTTCACCCGCGACGCGGGCGGCCCACACAGCAGCACCCTCACAGGGGGTTAGGAGccc > 2:4242160/1‑150 (MQ=25) ttGATGATGTCTGTTCGGGCCTCTTCGCGGGTGAACCCCCACCAACAACCGCCGGGGGCCAACCCCACAAGGGGGTACCGGGGACGAGCGGGTTCACCCGCCCCCAGGCCGCCCCAAACACCAACACCCGCACCCGGGGTTAGTAGcccc > 2:4272404/1‑150 (MQ=255) gATGTTGTCTGTTCGGGCCTCTTCGCGGGTTTACCCGCTCCGACAACGGCCTGGGTCCAAACCCAGATGTGTGTACGTGGTTGGGGCGGGGTCACCCGCGAAGAGGGCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGgccccg > 2:3188594/1‑148 (MQ=255) gtCTGTTCGGGCCTCTTCGCGGGTGAACCCCCACCAACAACCGCCGGGGTCCAACCCCCCAGGTGGGGACGGGGTCGGAGCGGGTTCACCCCCCAAGAGGCCCGCACAAACAGCAACAACCACCCAGGGGTTTAGTAGCCCCCCGCCCaa > 2:1882029/1‑150 (MQ=255) tCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCAGGGTCCAAACCCAGTTGTGTGTACGTGGTAGGAGCGGGTTCACCCCCGAAGAGGCCGGCACAAACAGCATCACCCACACACGGTTTTATTAGCCCCAGGCCCaaa > 2:4966216/1‑149 (MQ=38) tctTCGGGGGTTACCCCGATCCTCCCCCGGCCTGGGTCCAACCCCTGTTGTTGGTACGTGGTTGGTGGTGTTTCACCCGCTAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCaa < 2:4297300/150‑1 (MQ=255) tctTCGCGGGTGGACCCGCGCCGACCACGGCCGGGGTCCAACCCCAGATGTGTGTACGGGgtaggagcgggttcacccgcgaagaggccggcacagacaacagcaaatactcagaccaacaactcaatttcccccaaatgcccgccaaaa < 2:5074835‑M2/150‑91 (MQ=255) ttCGCGGGTGGACCCGCTCCTACcacgtacacacatctggggttggtcccaggccgttgtaggagcggggtcacccgcggagaggcccgaacagacaacatcaaatacgcagaccaacaactcaatttaccccaaaagcccgcccaaagg > 2:4727054‑M1/1‑23 (MQ=255) tCGCGGGTCACCCCGCTCCTACcacttacacacatggggggttggaccccggcggttgttggcgggggtccccccgcgaagaggcccgaacagacaacatcaaatactcagaccaacaactcaatttcccccaaatgcccgccaaaaggc < 1:3500946‑M1/150‑129 (MQ=255) ggggTGAACCCGCTCCTAAAACGGCCTGGGTCCAACCCCTGTTGTGTGTACTTGGTAGGTGCGGTTTCACCGGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAg < 2:1726020/149‑1 (MQ=255) cgGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCTGTTGTGTGTACGTGGTAGGTGCGGTTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAg < 2:1726037/150‑1 (MQ=255) gggTGAACCCGCTCCTACcacgtacacacatctggggttggacccaggccgttgtaggagcgggttcacccgcgaagaggcccgaa > 1:271423‑M1/1‑18 (MQ=255) gggTGAACCCGCTCCTACcacgtacacacatctggggttggacccaggccgttgtaggagcgggttcacccgcgaagaggcccgaa < 2:271423‑M1/86‑69 (MQ=255) gggTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAgg > 1:380251/1‑150 (MQ=255) gggTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGGAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAgg > 1:2430252/1‑150 (MQ=255) gtcaacccGCTCCTCCcccgaacacacatggggggttggacccaggccgttgtcggtgcgggttcacccgcgaagaggcccgaacagacaacatcaaatactcagaccaacaactcaatttcccccaaatgcccgccaaaaggcccgaaa < 1:442601‑M1/147‑135 (MQ=255) aaCCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTttatt < 1:5388260/111‑1 (MQ=255) aCCCGCTCCTACcacgtacacacatctggggttggacccaggccgttgtaggagcgggttcacccgcgaagaggcccgaacagacaacatcaaatactcagacccacaactcaatttcccccaaatgcccgccaaaaggcccgaaactgc > 2:3253016‑M1/1‑12 (MQ=255) aCCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGgtaggagcgggttcacccgcgaagaggcccgaacagacaacatcaaatactcagaccaacaactcaatttcccccaaatgcccgccaaaaggcccgaaa > 2:5303252‑M2/1‑47 (MQ=255) aCCCGCCCCTACcacttacccccatctggggttggccccaggccgttgttggaggggttacacccgcgaagaggcccgaacagacaacatcaaatactcagaccaacaactcaatttcccccaaatgcccgccaaaaggcccgaaactgc < 2:1345745‑M1/150‑139 (MQ=255) cccGCTCCTACcacgtacacacatctggggttggacccaggccgttgtaggagcgggttcacccgcgaagaggcccgaacagacaacatcaaatactcagaccaacaactcaatttcccccaaatgcccgccaaaaggcccgaaactgcg > 2:261293‑M1/1‑11 (MQ=255) cccGCTCCTACcacgtacacacatctggggttggacccaggccgttgtaggagcgggttcacccgcgaagaggcccgaacagacaacatcaaatactcagaccaacaactcaatttcccccaaatgcccgccaaaaggcccgaaactgcg > 1:2339399‑M1/1‑11 (MQ=255) ccGCTCCTACcacgtacacacatctggggttggacccaggccgttgtaggagcgggttcacccgcgaagaggcccgaacagacaacatcaaatactcagaccaacaactcaatttcccccaaatgcccgccaaaaggcccgaaactgcgc > 1:947912‑M1/1‑10 (MQ=255) ccGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAg > 2:3281986/1‑150 (MQ=255) ccGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAg > 1:2397653/1‑150 (MQ=255) cGCTCCTACcacgtacacacatctggggttggacccaggccgttgtaggagcgggttcacccgcgaagaggcccgaacagacaacatcaaatactcagaccaacaactcaatttcccccaaatgcccgccaaaaggcccgaaactgcgct > 2:2851986‑M1/1‑9 (MQ=255) cGCTCCTACcacgtacacacatctggggttggacccaggccgttgtaggagcgggttcacccgcgaagaggcccgaacagacaacatcaaatactcagaccaacaactcaatttcccccaaatgcccgccaaaaggcccgaaactgcgct > 2:2851818‑M1/1‑9 (MQ=255) gCTCCTACcacgtacacacatctggggttggacccaggccgttgtaggagcgggttcacccgcgaagaggcccgaacagacaacatcaaatactcagaccaacaactcaatttcccccaaatgcccgccaaaaggcccgaaactgcgctc > 1:1011750‑M1/1‑8 (MQ=255) gCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGgtaggagcgggttcacccgcgaagaggccgaacagacaacatcaaatactcagaccaacaactcaatttcccccaaatgcccgccaaaaggcccgaaactgcgctca < 1:3467284‑M2/150‑108 (MQ=255) gCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAggg > 2:3428608/1‑150 (MQ=255) gCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAggg > 2:5244207/1‑150 (MQ=255) cTCCTACcacgtacacacatctggggttggacccaggccgttgtaggagcgggttcacccgcgaagaggcccgaacagacaacatcaaatactcagaccaacaactcaatttcccccaaatgcccgccaaaaggcccgaaactgcgctca > 1:840776‑M1/1‑7 (MQ=255) tCCTACcacgtacacacatctggggttggacccaggccgttgtaggagcgggttcacccgcgaagaggcccgaacagacaacatcaaatactcagaccaacaactcaatttcccccaaatgcccgcca < 1:3867882‑M1/128‑123 (MQ=255) cTACcacgtacacacatctggggttggacccaggccgttgtaggagcgggttcacccgcgaagaggcccgaacagacaacatcaaatactcagaccaacaactcaatttcccccaaatgcccgccaaaaggcccgaaactgcgctcaacc > 1:3777107‑M1/1‑4 (MQ=255) cTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAg > 1:1842810/1‑150 (MQ=255) tACcacgtacacacatctggggttggacccaggccgttgtaggagcgggttcacccgcgaagaggcccgaacagacaacatcaaatactcagaccaacaactcaatttcccccaaatgcccgccaaaaggcccgaa > 1:4020414‑M1/1‑3 (MQ=255) tACcacgtacacacatctggggttggacccaggccgttgtaggagcgggttcacccgcgaagaggcccgaacagacaacatcaaatactcagaccaacaactcaatttcccccaaatgcccgccaaaaggcccgaa < 2:4020414‑M1/136‑134 (MQ=255) tACcacgtacacacatctggggttggacccaggccgttgtaggagcgggttcacccgcgaagaggcccgaacagacaacatcaaatactca < 2:5191027‑M1/91‑89 (MQ=255) tACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGt > 1:3204375/1‑150 (MQ=255) aCAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGgtaggagcgggttcacccgcgaagaggcccgaacagacaacatcaaatactcagaccaacaa < 2:4515172‑M2/99‑63 (MQ=255) | CACAGTGCTGATTGTGGATGATCAGGGGCAAAGGCGGCTGGTTGAGCGCAGTTTCGGGCCTTTTGGCGGGCATTTGGGGGAAATTGAGTTGTTGGTCTGAGTATTTGATGTTGTCTGTTCGGGCCTCTTCGCGGGTGAACCCGCTCCTACAACGGCCTGGGTCCAACCCCAGATGTGTGTACGTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAAACAGCATCACCCTCACAGGGTTTTATTAGCCCCAGGCCCAATCATCCGCGCCAACCCAAGGTTCTTCAGGGCCAGT > NC_002947/5872118‑5872414 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |