New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 173123247 (0.290)14 (0.110) 8/212 NT 25.4% intergenic (‑103/+88) dapE/PP_1526 succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
?NC_002947 = 1731268 45 (0.350)intergenic (‑139/+52) dapE/PP_1526 succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase

Only 100 of 120 total aligned reads displayed.

GCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGCCACATAAGGCAACGACTGCACCA  >  NC_002947/1731122‑1731417
                                                                                                                                                  |                                                                                                                                                     
gCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtg                                                                                                                                                    >  1:2312589‑M2/1‑147 (MQ=255)
 cgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTgg                                                                                                                                                   >  2:2089087‑M1/83‑150 (MQ=255)
 cgttcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTgg                                                                                                                                                   >  2:2089092‑M1/83‑150 (MQ=255)
    tcctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcgGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAg                                                                                                                                                >  2:2746724‑M1/80‑150 (MQ=255)
     cctgtcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGc                                                                                                                                               >  1:4941620‑M1/79‑150 (MQ=255)
      aTGGGGGACTCCGGGGCAAGGCAAGGCGTGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcg                                                                                                                                              >  2:4415685‑M2/1‑141 (MQ=255)
      aTGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACCGGTACTGCCCAGCGCTGAACGCCGGTGCCAAGCCGgggggagcg                                                                                                                                              <  2:4902189‑M2/150‑10 (MQ=255)
      aTGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcg                                                                                                                                              >  1:5216155‑M2/1‑141 (MQ=255)
      aTGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcg                                                                                                                                              >  2:682683‑M2/1‑141 (MQ=255)
      aTGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcg                                                                                                                                              >  1:3738653‑M2/1‑141 (MQ=255)
       tGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgg                                                                                                                                             >  2:5079981‑M2/1‑140 (MQ=255)
       tGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgg                                                                                                                                             >  1:393070‑M2/1‑140 (MQ=255)
         tcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGc                                                                                                                                           >  1:240771‑M1/75‑150 (MQ=255)
         tcgtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGc                                                                                                                                           >  2:5027654‑M1/75‑150 (MQ=255)
         ggggACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACCGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggc                                                                                                                                           >  1:2116394‑M2/1‑138 (MQ=255)
           gtcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGt                                                                                                                                         >  2:2069491‑M1/73‑150 (MQ=255)
            tcgctgcccaagcccgcagaaaaggctgcccaagcgcagcaggcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTg                                                                                                                                        >  2:671257‑M1/72‑150 (MQ=255)
            gACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgtg                                                                                                                                        <  1:4454366‑M2/150‑16 (MQ=255)
               tCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgt                                                                                                                                         >  2:5135908‑M2/1‑132 (MQ=255)
               tCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgt                                                                                                                                         <  1:5135908‑M2/146‑15 (MQ=255)
                 cGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTAGCGGGGCCGCCCCCGCCCCCACGGGCTGCCCCCCGCGGAACCCCGGTGCCAAGCCCGGGGGGGCGGGCGTGGCcgc                                                                                                                                   >  1:4572183/1‑150 (MQ=255)
                    ggcaaggcaaGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgtgcccgcgaa                                                                                                                                <  2:4495020‑M2/150‑24 (MQ=255)
                       aaggcaaggcGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgtgcccgcgaatgg                                                                                                                             <  2:3728081‑M2/150‑27 (MQ=255)
                       aaggcaaggcGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgtgcccgcgaatgg                                                                                                                             <  2:2971498‑M2/150‑27 (MQ=255)
                           cagggcGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTg                                                                                                                         <  2:3956645/147‑1 (MQ=255)
                           caaggcGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGg                                                                                                                                                      >  2:3969598‑M2/1‑120 (MQ=255)
                           caaggcGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGg                                                                                                                                                      <  1:3969598‑M2/121‑2 (MQ=255)
                           caaggcGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTg                                                                                                                         <  2:4761066/150‑1 (MQ=255)
                             aggcGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGGACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGca                                                                                                                       >  1:2184218/1‑150 (MQ=255)
                                          tGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCGGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGCATGGGCTGCACAGGTCGGCCCAg                                                                                                          >  2:717490/1‑150 (MQ=255)
                                              gggCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCCCGCCCACAGGTAATGCACAGCTCAGAACGCCAGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAAAGGGCTGCACAGGTCGGCCCAGGCaa                                                                                                      >  2:471826/1‑150 (MQ=39)
                                                      gcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGc                                                                                                                                           >  1:3580058‑M1/30‑105 (MQ=255)
                                                      gcttgaagttgcctgggccgacctgtgcaGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGc                                                                                                                                           <  2:3580058‑M1/76‑1 (MQ=255)
                                                        ttATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCACCCACACGTACAGCACACCACAGCAACCCAGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAAAGGGCGGCACAGGTCGGCCCAGGCAACATCAAGcca                                                                                            >  2:942717/1‑149 (MQ=37)
                                                        ttATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACCCCCGCTCCCACCGGTACGGCACACCGCTGAACGCCGGTGCCAAGCCGGGGGGAGCCGGCGGGCCCGCGCATGGGCTGCACCCGTCCGCCCAGGCAACGTCAAGCct                                                                                            >  2:943393/1‑150 (MQ=255)
                                                               aaaTGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAAAGCCAGTGCCAAACCCGTGGGAGCGGGCGTGCCCGCGAAATGGCTGCACCGGTCGGCCCCGGCAACATCAAGCCAGCTgcgc                                                                                     >  1:2597678/1‑150 (MQ=37)
                                                               aaaTGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCGCTGTACGCCTGTGCCCAGCCGGTGGGAGCGGGCGGGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCCACATCAAGCCGGCTgcgc                                                                                     >  1:1723385/1‑150 (MQ=38)
                                                                aaTGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgt                                                                                                                                                     >  1:2177200‑M2/1‑83 (MQ=255)
                                                                aaTGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgt                                                                                                                                                     <  2:2177200‑M2/85‑3 (MQ=255)
                                                                   ggTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTgg                                                                                 <  2:4572183/150‑1 (MQ=255)
                                                                    gTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTggg                                                                                <  2:5267578/150‑1 (MQ=255)
                                                                     tttCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCGGCGCTTGGGc                                                                               >  2:2099502/1‑150 (MQ=255)
                                                                     tttCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACGTCAAGCCTGCTGCGCTTGGGc                                                                               >  2:2099862/1‑150 (MQ=255)
                                                                          ggCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCt                                                                          >  2:2601720/1‑150 (MQ=255)
                                                                                 cGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGATCGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGc                                                                   <  2:3497105/150‑1 (MQ=255)
                                                                                 cGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCTCGGAACGCCTGTGCCAAGCCGGGGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGc                                                                   <  2:1590775/150‑1 (MQ=255)
                                                                                  ggCCCTTTGGCGGGCCCGCCCGCTCCCCCCGGTACTGAACAGCTCTGACGGCCGGTGCCACGCCGGTGGGCGGGGGCGGGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCg                                                                  <  1:942717/150‑1 (MQ=255)
                                                                                  ggCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCCgtgggagcgggcgtgcccgcgaaagggccgtgcagcccgaaaccaattgatataagataacgcccctcagatttacccgccgtgc                                                                  <  2:765037‑M2/150‑86 (MQ=255)
                                                                                  ggCCCATTCGCGGGCACGCCCGCTCCCAAAGGTACTGCAAAGCTCTGAACGCCTGTTCCAAGCCGgtgggagcgggcgtgcccgcgaatgggccgtgctgcccgaaaccatttgatataatataacgcccctcagatttaccccccgtgc                                                                  <  2:2292642‑M2/150‑86 (MQ=255)
                                                                                  ggCCCAGTCGGGGGCCCGCCCGCTCCCACCGGTACTGCACCGCTCGGCCGGCCGGGGCCCCGCGGGGGGGCGCGGGCGGGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCg                                                                  <  1:943393/150‑1 (MQ=255)
                                                                                     CCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGc                                                               <  2:600456‑M1/150‑1 (MQ=255)
                                                                                      CATTCGCGGGCACGCCCGCTCCCACAGGTACTGCCCAGCGCTGAACGCCTGTGCCAAGCCCGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCt                                                              <  1:3981659‑M1/150‑1 (MQ=255)
                                                                                      CATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACATCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCACCTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCt                                                              <  1:3981674‑M1/150‑1 (MQ=255)
                                                                                      CATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCt                                                              <  2:2639622‑M1/150‑1 (MQ=255)
                                                                                         gCGCGGGCCCGCCCGCCCCCACCGGTACTGCACCGCTCGGACCGCCTGGGCCACGCCGGGGGGCGGGGGGGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTgg                                                           >  1:2938492‑M1/2‑150 (MQ=255)
                                                                                           GCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGc                                                         <  1:2714432‑M1/150‑1 (MQ=255)
                                                                                             GGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGc                                                                            >  2:4829103‑M1/1‑129 (MQ=255)
                                                                                             GGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGc                                                                            <  1:4829103‑M1/129‑1 (MQ=255)
                                                                                             GGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCtttt                                                                       >  2:2281522‑M1/1‑134 (MQ=255)
                                                                                             GGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCtttt                                                                       <  1:2281522‑M1/134‑1 (MQ=255)
                                                                                                 gtGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGcgac                                                   <  2:3555362‑M1/148‑1 (MQ=255)
                                                                                                 ACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCACGCGGGTGGGAGGGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGcgac                                                   >  1:3730439‑M1/1‑150 (MQ=255)
                                                                                                     ccGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgtgcccgcgaatgggccgtgctgcccgaaaccatttgatataagataacgcccctcagatttccccgccttgccttgccccggagtccccca                                               <  2:4304151‑M2/150‑105 (MQ=255)
                                                                                                     CCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACa                                               >  2:5339549‑M1/1‑150 (MQ=255)
                                                                                                     CCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACa                                               <  2:1099371‑M1/150‑1 (MQ=255)
                                                                                                     CCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACa                                               <  1:1066313‑M1/150‑1 (MQ=255)
                                                                                                         tCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgtgcccgcgaatgggccgtgctgcccgaaaccatttgatataagataacgcccctcaga                                                                                >  1:1752716‑M2/1‑42 (MQ=255)
                                                                                                         tCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgtgcccgcgaatgggccgtgctgcccgaaaccatttgatataagataacgcccctcaga                                                                                <  2:1752716‑M2/113‑72 (MQ=255)
                                                                                                         tCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgtgcccgcgaatgggccgtgctgcccgaaaccatttgatataagataacgcccctca                                                                                  <  2:4021045‑M2/111‑70 (MQ=255)
                                                                                                         tCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgtgcccgcgaatgggccgtgctgcccgaaaccatttgatataagataacgcccctca                                                                                  >  1:4021045‑M2/1‑42 (MQ=255)
                                                                                                         TCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGaa                                           <  2:126077‑M1/150‑1 (MQ=255)
                                                                                                           ccACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgtgcccgcgaatgggccgtgctgcccgaaaccatttgatataagataacgcccctcagatttccccgccttgccttgccccggagtcccccatgacgg                                         <  2:745224‑M2/150‑111 (MQ=255)
                                                                                                           ccACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgtgcccacgaatgggccgtgctgcccgaaaccatttgatataagataacgcccctcagatttccccgccttgccttgccccggagtcccccatgacgg                                         <  2:2966757‑M2/150‑111 (MQ=255)
                                                                                                           ccACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgtgcccacgaatgggccgtgctgcccgaaaccatttgatataagataacgcccctcagatttccccgccttgccttgccccggagtcccccatgacgg                                         <  2:2763722‑M2/150‑111 (MQ=255)
                                                                                                             ACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGcc                                       <  1:3154192‑M1/150‑1 (MQ=255)
                                                                                                                ggTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgtgcccgcgaatgggccgtgctgcccgaaaccatttgatataagataacgcccctcagatttccccgccttgccttgccccggagtcccccatgacggcccct                                    <  2:775552‑M2/150‑116 (MQ=255)
                                                                                                                       cacaGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAgcg                             >  1:5107985/1‑150 (MQ=255)
                                                                                                                          aGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCggg                                                                >  2:3065190/1‑112 (MQ=255)
                                                                                                                          aGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCggg                                                                <  1:335355/112‑1 (MQ=255)
                                                                                                                          aGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCggg                                                                <  1:3065190/112‑1 (MQ=255)
                                                                                                                          aGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTg                          >  1:5160213/1‑150 (MQ=255)
                                                                                                                            ctctGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGcc                        >  1:4293313/1‑150 (MQ=255)
                                                                                                                             tctGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACa                                               >  1:714643/1‑126 (MQ=255)
                                                                                                                             tctGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACa                                               <  2:714643/126‑1 (MQ=255)
                                                                                                                             tctGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGCca                       <  1:622356/150‑1 (MQ=255)
                                                                                                                             tctGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGCca                       <  2:4790626/150‑1 (MQ=255)
                                                                                                                              ctGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGCcac                      <  2:4454366/150‑1 (MQ=255)
                                                                                                                               tGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGCcaca                     >  2:4903488/1‑150 (MQ=255)
                                                                                                                               tGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGCcaca                     >  1:709630/1‑150 (MQ=255)
                                                                                                                               tGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGCcaca                     >  1:709627/1‑150 (MQ=255)
                                                                                                                                 aaCGCCTGTGCCAAGCCGgtgggagcgggcgtgcccgcgaatgggccgtgctgcccgaaaccatttgatataagataacgcccctcagatttccccgccttgccttgccccggagtcccccatgacggcccctgccgagctctcgcctac                   <  2:3935701‑M2/150‑133 (MQ=255)
                                                                                                                                  aCGCCTGTGCCATGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGCCACATaa                  <  1:1194096/150‑1 (MQ=255)
                                                                                                                                   cGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGCCACATAAg                 <  2:3878262/150‑1 (MQ=255)
                                                                                                                                    gCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGCCACATAAgg                >  2:3014128/1‑150 (MQ=255)
                                                                                                                                    gCCGGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGCCACATAAgg                <  2:281445/150‑1 (MQ=255)
                                                                                                                                           ccAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGCCACATAAGGCAACGAc         >  1:3015165/1‑150 (MQ=255)
                                                                                                                                           ccAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGCCACATAAGGCAACGAc         >  1:4996797/1‑150 (MQ=255)
                                                                                                                                           ccAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGCCACATAAGGCAACGAc         >  2:1009491/1‑150 (MQ=255)
                                                                                                                                            cAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGCCACATAAGGCAACGACt        >  2:2951712/1‑150 (MQ=255)
                                                                                                                                                  ggTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGCCACATAAGGCAACGACTGCACCa  <  1:4495020/150‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                     
GCCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGCCACATAAGGCAACGACTGCACCA  >  NC_002947/1731122‑1731417

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.