New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 394990652 (0.320)12 (0.090) 6/212 NT 22.4% coding (109/1797 nt) PP_3483 type II secretion system protein
?NC_002947 = 3949935 42 (0.320)coding (80/1797 nt) PP_3483 type II secretion system protein

Only 100 of 128 total aligned reads displayed.

GGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAGGGGTGCGGGCGCCGCTATTCCCCT  >  NC_002947/3949786‑3950084
                                                                                                                                                     |                                                                                                                                                     
ggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACAt                                                                                                                                                       <  1:2550784/150‑1 (MQ=255)
 gCGTTCCTGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATc                                                                                                                                                      >  1:166630‑M2/1‑149 (MQ=255)
      ccAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGGATGCCCGCGCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcgtgtg                                                                                                                                                 <  2:4780742‑M2/150‑7 (MQ=255)
       agcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTgg                                                                                                                                                >  1:3271189‑M1/87‑150 (MQ=255)
       agcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTgg                                                                                                                                                >  1:4152725‑M1/87‑150 (MQ=255)
       agcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcagtcgatgcaaccccggaatctgcaaagcctgcaccgacgTCGTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTgg                                                                                                                                                >  2:1327316‑M1/87‑150 (MQ=255)
        gcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTggg                                                                                                                                               >  2:4579485‑M1/86‑150 (MQ=255)
        aGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtggg                                                                                                                                               <  2:4818056‑M2/150‑9 (MQ=255)
         ggCAGTCGAGCAGGCGCTCGTCAGTGGATTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGACATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtggga                                                                                                                                              <  2:1098916‑M2/150‑10 (MQ=255)
         cctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGa                                                                                                                                              >  2:1733258‑M1/85‑150 (MQ=255)
         cctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGa                                                                                                                                              >  1:30623‑M1/85‑150 (MQ=255)
         cctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGa                                                                                                                                              >  1:778663‑M1/85‑150 (MQ=255)
           tgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGc                                                                                                                                            >  1:1659657‑M1/83‑150 (MQ=255)
            gcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCg                                                                                                                                           >  2:4046708‑M1/82‑150 (MQ=255)
             gTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgg                                                                                                                                          >  1:836471‑M2/1‑137 (MQ=255)
             cgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCgg                                                                                                                                          >  1:877373‑M1/81‑150 (MQ=255)
             cgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCgg                                                                                                                                          >  1:1186751‑M1/81‑150 (MQ=255)
              tCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcggg                                                                                                                                         >  1:4631853‑M2/1‑136 (MQ=255)
              gacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCggg                                                                                                                                         >  1:4457241‑M1/80‑150 (MQ=255)
                  gCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGGCAGGTGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCTGGCATGCCCGCTCCCACAGGTTCATCACAGGTCTGTGGGCTGCATTCATcctgtgggagcgggcatg                                                                                                                                     >  2:2558820‑M2/1‑132 (MQ=255)
                  gCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatg                                                                                                                                     >  1:1962915‑M2/1‑132 (MQ=255)
                   cAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgc                                                                                                                                    >  2:2401857‑M2/1‑131 (MQ=255)
                    aGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGGCCGTCACTGGTCTGTGGGCTGCCTACAGccggtgggagcgggcatgcg                                                                                                                                   <  1:3593560‑M2/150‑21 (MQ=255)
                     ccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGCCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGccc                                                                                                                                  >  2:2426101‑M1/73‑150 (MQ=255)
                          tCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTGCATCACAGGGCTGTGGGCTGCATACATcctgtgggagcggggatgcccgcgac                                                                                                                             <  1:1940900‑M2/150‑27 (MQ=255)
                          tCGTCAGTGCCTGGCAGACGGGCCGGGGCCAGGAGGCCGCGGGGGTAGGCGGAAATTTTGGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaa                                                                                                                             >  2:1940900‑M2/1‑124 (MQ=255)
                            gTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGGGGGCTGCATACATcctgtgggagcgggcatgcccgcgaaga                                                                                                                           <  2:3181048‑M2/150‑29 (MQ=255)
                                gTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGACGACGTc                                                                                                                       >  2:3436332/1‑150 (MQ=255)
                                       gctgccGGGCCTGGGCCTGGAGGTCGCGGGGGTATGCGGAAATTTTTGCTGGGTTCTGCGCGGGCAGGCCCGCTCCCACCGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAg                                                                                                                <  2:5386179/145‑1 (MQ=255)
                                       gCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCCCAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGACGACGTCGGTGCAg                                                                                                                >  2:1034782/1‑150 (MQ=255)
                                       gCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCCCAGGGGCATCAGCGGTGTGTGGGCGGCATACAGCGGGTGGGAGCGGGCCTGCCCGCGGAGAGGGCGGGGCAg                                                                                                                >  1:3076128/1‑150 (MQ=255)
                                           aCGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGGACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGCAGACGGCGGTGCCGGcgg                                                                                                            >  1:3989728/1‑148 (MQ=255)
                                               gCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCa                                                                                                        >  2:880075/1‑150 (MQ=255)
                                                     gCCAGGAGGTCGCGGGGGTAGGCGGAAATTGTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACCTCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCAAGCCCGCGAAGACGGCGGTGCAGGCTTTGCAGAGTcc                                                                                                  >  2:2740485/1‑150 (MQ=39)
                                                      ttcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGc                                                                                                                                        <  2:2564723‑M1/72‑1 (MQ=255)
                                                      ttcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGc                                                                                                                                        >  1:2564723‑M1/40‑111 (MQ=255)
                                                      ccAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATTCCCGCACCCACAGGTACATAACAGGTCTGTGGGCTGCATACAACCTGTTGGAGCGGGCAGGCCCCCGCCGAAGTCGGTGCAGGCGTTGCCGAATCCg                                                                                                 >  1:2498564/1‑150 (MQ=255)
                                                         gatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCgg                                                                                                                                          <  1:1266801‑M1/70‑1 (MQ=255)
                                                         gatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCgg                                                                                                                                          <  1:1266412‑M1/70‑1 (MQ=255)
                                                         gatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCgg                                                                                                                                          >  2:1266801‑M1/37‑106 (MQ=255)
                                                         gatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCgg                                                                                                                                          >  2:1266412‑M1/37‑106 (MQ=255)
                                                           cgggcgcgGGGGTAGGCGGACATGTTTGCGGGGTCCTTCGCGGGCAGGCCCGCTCCCACTGGTACCTCCCAGGTCTGTGGGCTGCATACAGCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGtt                                                                                            <  2:4831263/146‑1 (MQ=255)
                                                           cggTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTGTTCGCGGGCATGCCCGCTCCCACCGGTCCAGCACTGGTGTGTGGGCGGCATACATCCGGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGtt                                                                                            <  2:3934194/149‑1 (MQ=255)
                                                           aggTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACCGGTACAGCACCGGTCTGTGGGCTGCATACATCCTGGGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGtt                                                                                            <  2:3975212/150‑1 (MQ=255)
                                                             gtggggggggTTGGCGGAACTTTTGGCTGGGTGCTTCGGGGGCAGGCCCGCTCCCACCGGTACAGCCCGGGTCTGGGGGCTGCATCCCGCCGGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGc                                                                                          <  2:2570144/145‑1 (MQ=255)
                                                                   ggggTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACCGGTACATCACTGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGCAGCAtggcc                                                                                    <  2:2714401/150‑5 (MQ=39)
                                                                           cGGAAATTGTGGCTGGGTTCTGCGCGGGCAGGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACCTCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTg                                                                            <  2:3548314/150‑1 (MQ=255)
                                                                            ggAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACCGGTACAGCACAGGTCGGTGGGCGGCATACAACCTGTGGGAGCGGGCATGCCCGCGAACACCTCGGTGCAGGCTTTGCCGATTCCGGGGTTGCATCGACTGCTTCttg                                                                           >  2:278938/1‑148 (MQ=38)
                                                                            ggAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCGGCATACATCCTGTGGGAGCGGGCCTGCCCGCGACGACGTCGGTGCCGGCTTTGCCGATTCCGGGGGTGCATCGAATGCTTCggg                                                                           >  2:278939/1‑150 (MQ=38)
                                                                                 tttttGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCGTCTGGCATgg                                                                      >  2:1724099/1‑150 (MQ=255)
                                                                                  ttttGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTCCATCACCGGTCTGTGGGCTGCATACATCCTGTCGGAGCGGGCAAGCCCGCGAAGACCACGGTGCAGGCTTTGCACATTCCGGGGGTGCATCGAAAGCTGCAGGCATGGc                                                                     >  2:4995960/1‑150 (MQ=38)
                                                                                   tgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGc                                                                                                                                            <  1:265727‑M1/68‑1 (MQ=255)
                                                                                   tgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGc                                                                                                                                            >  2:265727‑M1/11‑78 (MQ=255)
                                                                                      ggggggTTGTTCGCGGGCAGGGCCGCGCCCCCTGGTACCTCCCCGGTCGGGGGGCTGAATACCCCCTGGGGGCGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGc                                                                 <  1:880075/147‑1 (MQ=255)
                                                                                      gcggggTTCTTCGGGGGCATGCCCGCTCCCACCGGTCCATCACAGGTCGGTGGGCTGCATACCTCCTGGGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGc                                                                 <  2:4995940/147‑1 (MQ=255)
                                                                                        tGGGTTCTTCGCGGGCATGCCCGCTCCCACCGGTACATCACAGGTCTGTGGGCTGCATACATCCGGTGGGAGCGGGCCTGCCCCCGCAGAAGTCCGGGCAGGCTTTGCAGAGTCCGGGGGTGCATCGAATGCGTCTGGCATGGCCTGCgc                                                               >  1:2191577/1‑149 (MQ=255)
                                                                                        tGGGTTCTTCGCGGGCATGCCCGCTACCACAGGTACATCACAGGTCTGTGGGCTGCATAAAAACTGGGGGAGCCGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGa                                                               >  2:485826/1‑150 (MQ=255)
                                                                                              CTTCGGGGGCAGGCCCGCTCCCACCGTTACACCCCTGGTCTGGGGGCTGCATACATCCTGGGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGc                                                         >  2:148685‑M1/1‑150 (MQ=255)
                                                                                                  GCGGGCATGCCCGCTCCCACAGGTACCTCACCGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAg                                                     >  2:4536916‑M1/1‑150 (MQ=255)
                                                                                                   CGGGCAGGCCCGCTCCCCCCGGTACATCCCCGGTCTGTGGGCTGCCTCCATCCGGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAgg                                                    >  2:899557‑M1/1‑150 (MQ=255)
                                                                                                       CATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGgcg                                                <  2:5116729‑M1/150‑1 (MQ=255)
                                                                                                        aTGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgct                                               <  1:362280‑M2/150‑105 (MQ=255)
                                                                                                        aTGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgct                                               <  1:922861‑M2/150‑105 (MQ=255)
                                                                                                        ATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGgcgc                                               <  2:4730755‑M1/150‑1 (MQ=255)
                                                                                                        ATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGGGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGgcgc                                               <  2:417420‑M1/150‑1 (MQ=255)
                                                                                                          gCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcg                                             <  2:1224203‑M2/150‑107 (MQ=255)
                                                                                                          GCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGt                                             <  2:1008225‑M1/150‑1 (MQ=255)
                                                                                                          GCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGt                                             <  1:1683624‑M1/150‑1 (MQ=255)
                                                                                                           CCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTc                                            <  1:1759332‑M1/150‑1 (MQ=255)
                                                                                                           CCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTc                                            <  1:2215175‑M1/150‑1 (MQ=255)
                                                                                                            ccGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgacgaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcacgccactgacgagcgcctgcgcgac                                           <  2:4305361‑M2/150‑109 (MQ=255)
                                                                                                            ccGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgac                                           <  2:2441922‑M2/150‑109 (MQ=255)
                                                                                                            ccGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgac                                           <  1:4333069‑M2/150‑109 (MQ=255)
                                                                                                             CGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGc                                          <  2:1274350‑M1/150‑1 (MQ=255)
                                                                                                                tCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcc                                       <  1:1751476‑M2/150‑113 (MQ=255)
                                                                                                                 cccACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcct                                      <  2:2693487‑M2/150‑114 (MQ=255)
                                                                                                                  ccACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctg                                     <  1:2160171‑M2/150‑115 (MQ=255)
                                                                                                                  CCACCGGTACATCCCCGGTCTGTGGTCTGCTTACCTCGGGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggct                                     >  2:1284529‑M1/1‑150 (MQ=255)
                                                                                                                  CCACAGGTACATCACCGGTCGGGGGGCTGCATACCTCCTGGGGGCGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggct                                     >  2:3644002‑M1/1‑150 (MQ=255)
                                                                                                                  CCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCa                                                                                         >  2:929993‑M1/1‑98 (MQ=255)
                                                                                                                  CCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCa                                                                                         <  1:929993‑M1/98‑1 (MQ=255)
                                                                                                                  CCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggct                                     <  1:2239065‑M1/150‑1 (MQ=255)
                                                                                                                    ACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggctgg                                   <  2:2097957‑M1/150‑1 (MQ=255)
                                                                                                                    ACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggctgg                                   <  2:3992806‑M1/150‑1 (MQ=255)
                                                                                                                      AGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggctggct                                 <  1:3825232‑M1/150‑1 (MQ=255)
                                                                                                                            aTCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCa                           >  1:985475/1‑150 (MQ=255)
                                                                                                                            aTCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCa                           >  1:4281198/1‑150 (MQ=255)
                                                                                                                            aTCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCa                           >  1:4863242/1‑150 (MQ=255)
                                                                                                                            aTCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCa                           >  1:4625596/1‑150 (MQ=255)
                                                                                                                             tCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAg                          >  2:1042924/1‑150 (MQ=255)
                                                                                                                              cacaGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAgg                         >  2:3031004/1‑150 (MQ=255)
                                                                                                                               acaGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAggg                        >  1:871704/1‑150 (MQ=255)
                                                                                                                                 aGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAGGGGt                      >  2:3775577/1‑150 (MQ=255)
                                                                                                                                   gTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAGGGGTGc                    >  2:2576821/1‑150 (MQ=255)
                                                                                                                                             tGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATgg                                                                      >  1:402377/1‑90 (MQ=255)
                                                                                                                                             tGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATgg                                                                      <  2:402377/90‑1 (MQ=255)
                                                                                                                                             tGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAGGGGTGCGGGCGCCGCt          >  2:583415/1‑150 (MQ=255)
                                                                                                                                                 tACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAGGGGTGCGGGCGCCGCTATTc      <  1:1098916/150‑1 (MQ=255)
                                                                                                                                                     tCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAGGGGTGCGGGCGCCGCTATTCCCCt  <  1:5116729/150‑1 (MQ=255)
                                                                                                                                                     tCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAGGGGTGCGGGCGCCGCTATTCCCCt  >  2:779987/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCGGCCAGGGGTGCGGGCGCCGCTATTCCCCT  >  NC_002947/3949786‑3950084

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.