New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5788464 =83 (0.500)8 (0.050) 7/260 NT 9.4% intergenic (+29/‑102) PP_5068/trxC hypothetical protein/thioredoxin
?NC_002947 5788481 = 74 (0.460)intergenic (+46/‑85) PP_5068/trxC hypothetical protein/thioredoxin

Only 100 of 158 total aligned reads displayed.

ACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGC  >  NC_002947/5788332‑5788629
                                                                                                                                                     |                                                                                                                                                    
aCCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCaa                                                                                                                                                      >  1:3778174/1‑150 (MQ=255)
   aggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttccttgtgggagcgggcgtgcccgcgaacaccggcgaagccggtgcaatccatcacgtTGCCCGCGAAGCAGGCAACGt                                                                                                                                                   >  1:1608950‑M1/130‑150 (MQ=255)
   aaGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGt                                                                                                                                                   <  2:4273916/150‑1 (MQ=255)
     gccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttccttgtgggagcgggcgtgcccgcgaacaccggcgaagccggtgcaatccatcacgtTGCCCGCGAAGCAGGCAACGTGa                                                                                                                                                 >  1:729912‑M1/128‑150 (MQ=255)
      tCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGAt                                                                                                                                                <  1:3654448/150‑1 (MQ=255)
       cgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttccttgtgggagcgggcgtgcccgcgaacaccggcgaagccggtgcaatccatcacgttgcccgcgaagcaggcaACGTGATg                                                                                                                                               <  2:1040555‑M2/8‑1 (MQ=255)
       ccTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATg                                                                                                                                               <  2:3590102/150‑1 (MQ=255)
         ttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttccttgtgggagcgggcgtgcccgcgaacaccggcgaagccggtgcaatccatcacgttgcccgcgaagcaggcaACGTGATGGa                                                                                                                                             <  2:3974018‑M2/10‑1 (MQ=255)
         tGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGa                                                                                                                                             >  1:2032194/1‑150 (MQ=255)
           gCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGAtt                                                                                                                                           <  1:1475851/150‑1 (MQ=255)
           gCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGAtt                                                                                                                                           <  1:3622270/150‑1 (MQ=255)
            ccAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTg                                                                                                                                          >  2:2970314/1‑150 (MQ=255)
            ccAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTg                                                                                                                                          <  1:234364/150‑1 (MQ=255)
              aGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCa                                                                                                                                        <  2:4222523/150‑1 (MQ=255)
                gCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCAcc                                                                                                                                      >  2:978861/1‑150 (MQ=255)
                 ccTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCg                                                                                                                                     <  1:4893226/150‑1 (MQ=255)
                   tttCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGc                                                                                                                                   >  1:5273550/1‑150 (MQ=255)
                       gAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCg                                                                                                                               >  1:4880179/1‑150 (MQ=255)
                        aGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAACTCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGc                                                                                                                              <  1:5090523/150‑1 (MQ=255)
                        aGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGc                                                                                                                              >  1:1372992/1‑150 (MQ=255)
                          gAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCg                                                                                                                            <  1:478701/150‑1 (MQ=255)
                          gAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCg                                                                                                                            >  1:2664903/1‑150 (MQ=255)
                          gAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCg                                                                                                                            <  1:3164424/150‑1 (MQ=255)
                            aCAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGgt                                                                                                                          >  1:1219533/1‑150 (MQ=255)
                            aCAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGGGGGGCAAGCACCTGGAAATCCGCTGCTCTTCCTGATTAGCGCCGAAGCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATGGCACCGGCTTCGCCGgt                                                                                                                          <  1:705199/150‑1 (MQ=255)
                                 ccGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCGAAGCCGgtgcaat                                                                                                                     <  2:3467722/150‑5 (MQ=255)
                                  cGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgc                                                                                                                    <  1:4152305‑M2/150‑6 (MQ=255)
                                     gATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcggg                                                                                                                 >  2:2141447‑M2/1‑142 (MQ=255)
                                     cggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCggg                                                                                                                 >  2:330125‑M1/82‑150 (MQ=255)
                                     cggttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcccTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCggg                                                                                                                 >  1:3532430‑M1/82‑150 (MQ=255)
                                      aTGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggc                                                                                                                >  2:4054693‑M2/1‑141 (MQ=255)
                                        ttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCAc                                                                                                              >  1:5399174‑M1/79‑150 (MQ=255)
                                        ttgaggccgttgcagtgggggcaggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCAc                                                                                                              >  1:5399185‑M1/79‑150 (MQ=255)
                                        gCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggcac                                                                                                              <  1:3783994‑M2/150‑12 (MQ=255)
                                        gCAAGCCTACGCCGAGCGACCGCCGGAGTGGGCCAAGCACCTGGAAATCAGCTGCTCTGCCTGATTCGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCCACGTGATGGAGGGCACCGGCTTCGCCGGTGtgcgcgggcac                                                                                                              <  2:2823480‑M2/150‑12 (MQ=255)
                                         cAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggcacg                                                                                                             >  1:2752945‑M2/1‑138 (MQ=255)
                                         cAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggcacg                                                                                                             >  1:1700880‑M2/1‑138 (MQ=255)
                                          aaGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttc                                                                                                                      >  2:4438977‑M2/1‑137 (MQ=255)
                                          aaGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttc                                                                                                                      <  1:4438977‑M2/140‑4 (MQ=255)
                                          aaGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGgtcgcgggcacgc                                                                                                            <  1:136066‑M2/150‑14 (MQ=255)
                                               tACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggcacgcccgct                                                                                                       <  2:1031612‑M2/150‑19 (MQ=255)
                                                 cGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGAGGGATTGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcc                                                                                                     >  1:4037157‑M2/1‑130 (MQ=255)
                                                   ccGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctccca                                                                                                   >  2:4152374‑M2/1‑128 (MQ=255)
                                                   ccGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctccca                                                                                                   >  2:4152305‑M2/1‑128 (MQ=255)
                                                      cccGACCGCCGGAGCGGGGCAAGCACCGGGAAAACCGCCGCACCTCCTGATCACCGCCGACTCCGGGGGGCGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACaa                                                                                                <  1:3465395/148‑1 (MQ=21)
                                                      aGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACaa                                                                                                <  2:1372992/150‑1 (MQ=255)
                                                         gACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGa                                                                                             >  2:1766476/1‑150 (MQ=255)
                                                          aCCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGaa                                                                                            >  2:1886090/1‑150 (MQ=255)
                                                             gccgGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAAcc                                                                                         <  2:1303234/150‑1 (MQ=255)
                                                              ccgGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTAGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCg                                                                                        >  2:3790075/1‑150 (MQ=255)
                                                              aggggattaccagtgggtcggtcatttcatctccggtgttgggttcacggtttcctGGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCggg                                                                                                                 <  2:736816‑M1/69‑1 (MQ=255)
                                                               cgGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAAGCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGt                                                                                       <  1:4205545/150‑1 (MQ=255)
                                                                 gcgTGGGGCAAGCACCGGGAACTCAGCGGCTCTGCCTGCTTAGCGCCGAATCCTGGGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGa                                                                                     <  1:739703/148‑1 (MQ=25)
                                                                 gAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGa                                                                                     >  1:4205404/1‑150 (MQ=255)
                                                                    tGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGAGTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAAcc                                                                                  <  2:4547818/150‑1 (MQ=255)
                                                                      ggtttccttgtgggagcgggcgtgcccgcgaacaccggcgaagccggtgcaatccatcacgttgcccgcgaagcaggcaACGTGAt                                                                                                                                                <  1:1388239‑M2/7‑1 (MQ=255)
                                                                           aGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACAcc                                                                           <  1:2138756/150‑1 (MQ=255)
                                                                             cACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCgg                                                                         >  2:5163776/1‑150 (MQ=255)
                                                                             cACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCgg                                                                         >  2:4792398/1‑150 (MQ=255)
                                                                              aCCTGGAAATCAGCTGCTCTTCCTGATCAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGga                                                                        <  1:3810360/150‑1 (MQ=255)
                                                                                cTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGgaga                                                                      >  2:1470310/1‑150 (MQ=255)
                                                                                 tGGAAATCCGCTGCTCTGCCGGAGGTGCGCCGCATGCTGTGGGCGCGGGCGTGCCCGCGAAGCCGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGGGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGgagag                                                                     <  2:55305/150‑2 (MQ=25)
                                                                                 gggagcgggcgtgcccgcgaacaccggcgaagccggtgcaatccatcacgttgcccgcgaagcaggcaACGTGATGGa                                                                                                                                             >  2:2544087‑M2/69‑78 (MQ=255)
                                                                                  ggAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCGCCCCCCACGAAACCGTGACCCCCACACCCgagagc                                                                    >  1:3148659/1‑148 (MQ=25)
                                                                                     aaTCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGaaa                                                                 <  2:4205404/150‑1 (MQ=255)
                                                                                        cAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctccca                                                                                                   <  1:3427058‑M2/113‑23 (MQ=255)
                                                                                          gctgctCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAAAgacc                                                            >  2:1895049/1‑150 (MQ=255)
                                                                                                 ttCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAACCCGTGAACCCAACACCGGAGATGAAATGACCGACCCAc                                                     >  2:1684071/1‑150 (MQ=255)
                                                                                                 tgccTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCCCGCAGCAGGCAACGTGATGGATTGCACCGGCTTCCCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGTTGAAATGACCGACCCAc                                                     >  2:1684237/3‑150 (MQ=255)
                                                                                                           gcgcCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACCCCGGAGCTGACATGACCGACCCACTGGTAATccc                                           >  1:5313672/1‑150 (MQ=255)
                                                                                                           gcgcCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATccc                                           >  1:5313669/1‑150 (MQ=255)
                                                                                                                    ccTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCa                                  <  1:1887117/150‑1 (MQ=255)
                                                                                                                         gggAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacaggattcggcgctaatcaggaagagcagctgatttccaggtgcttgccccactccggcggtcgctcggc                             <  2:4918846‑M2/150‑93 (MQ=255)
                                                                                                                         gggAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacaggattcggcgctaatcaggaagagcagctgatttccaggtgcttgccccactccggcggtcgctcggc                             <  2:539268‑M2/150‑93 (MQ=255)
                                                                                                                          tccatcacgtTGCCTGCTTCGCGGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTccc                                                                                                    >  2:2544087‑M1/11‑78 (MQ=255)
                                                                                                                          tccatcacgtTGCCTGCTTCGCGGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTccc                                                                                                    <  1:2544087‑M1/68‑1 (MQ=255)
                                                                                                                          tccatcacgtTGCCTGCTTCGCGGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCaa                            <  2:3974018‑M1/140‑1 (MQ=255)
                                                                                                                             atcacgtTGCCTGCTTCGCGGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAAcc                                                                                         >  2:1388239‑M1/8‑86 (MQ=255)
                                                                                                                              tcacgttgcctgcttcgcgggcaACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGc                        >  1:729912‑M2/24‑150 (MQ=255)
                                                                                                                               gggCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacaggattcggcgctaatcaggaagagcagctgatttccaggtgcttgccccactccggcggtcgctcggcgtaggc                       <  2:5207369‑M2/150‑99 (MQ=255)
                                                                                                                                ggCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcggggacgcccgc                                                                                                        <  2:2217195‑M2/68‑18 (MQ=255)
                                                                                                                                ggCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggcacgcccgc                                                                                                        >  1:2217186‑M2/1‑51 (MQ=255)
                                                                                                                                ggCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggcacgcccgc                                                                                                        >  1:2217195‑M2/1‑51 (MQ=255)
                                                                                                                                   GTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCaa                   <  1:2066949‑M1/150‑1 (MQ=255)
                                                                                                                                    TGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAAc                  <  1:4720481‑M1/150‑1 (MQ=255)
                                                                                                                                      CCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATgac                                                             <  2:3900365‑M1/105‑1 (MQ=255)
                                                                                                                                      CCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATgac                                                             >  1:3900365‑M1/1‑105 (MQ=255)
                                                                                                                                       ccGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacaggattcggcgctaatcaggaagagcagctgatttccaggtgcttgccccactccggcggtcgctcggcgtaggcttgcatcc               <  1:2885846‑M2/150‑107 (MQ=255)
                                                                                                                                       CCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGTCCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCCCAACCGc               >  2:2664903‑M1/1‑150 (MQ=255)
                                                                                                                                        cgcgAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacaggattcggcgctaatcaggaagagcagctgatttccaggtgcttgccccactccggcggtcgctcggcgtaggcttgcatccc              <  2:2100261‑M2/150‑108 (MQ=255)
                                                                                                                                        CGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGcc              <  2:5347812‑M1/150‑1 (MQ=255)
                                                                                                                                         gcgAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacaggattcggcgctaatcaggaagagcagctgatttccaggtgcttgccccactccggcggtcgctcggcgtaggcttgcatcccg             <  2:796756‑M2/150‑109 (MQ=255)
                                                                                                                                          CGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTg            >  1:1886090‑M1/1‑150 (MQ=255)
                                                                                                                                            AAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGcc          <  1:1841662‑M1/150‑1 (MQ=255)
                                                                                                                                                aGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGccc         >  2:1136075/1‑147 (MQ=255)
                                                                                                                                                aGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGccc         <  1:1136075/147‑1 (MQ=255)
                                                                                                                                                  gcaACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGa    <  2:1508731‑M2/147‑1 (MQ=255)
                                                                                                                                                    caCGGGATGGATGGCACCGGCTTCGCCGGGGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCGGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAgc  <  1:3418128/149‑1 (MQ=255)
                                                                                                                                                    aaCGTGATGGATTGCACCGGCTTCGCCGGTGttcgcgggcacgcccgctcccacaggattcggcgctaatcaggaagagcagctgatttccaggtgcttgccccactccggcggtcgctcggcgtaggcttgcatcccgggctgttcctc  <  2:2679153‑M2/150‑120 (MQ=255)
                                                                                                                                                    aACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGc  <  1:4597674‑M2/149‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
ACCAAGTCCTGGCCAGGCCTTTCGAGGAACAGCCCGGGATGCAAGCCTACGCCGAGCGACCGCCGGAGTGGGGCAAGCACCTGGAAATCAGCTGCTCTTCCTGATTAGCGCCGAATCCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCAACGTGATGGATTGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAAGGAAACCGTGAACCCAACACCGGAGATGAAATGACCGACCCACTGGTAATCCCCTGCCCCCACTGCAACGGCCTCAACCGCCTGCCCGCCGAGC  >  NC_002947/5788332‑5788629

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.