New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6002881 =89 (0.540)12 (0.090) 9/208 NT 17.6% intergenic (+10/+99) PP_5256/amaA cyclic nucleotide‑binding protein/L‑pipecolate oxidase
?NC_002947 6002975 = 43 (0.340)intergenic (+104/+5) PP_5256/amaA cyclic nucleotide‑binding protein/L‑pipecolate oxidase

Only 100 of 126 total aligned reads displayed.

CTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGAGCAGGAA  >  NC_002947/6002828‑6003123
                                                                                                                                                   |                                                                                                                                                    
ctacaaacacGACGGGGGGCTTCCTGAGTTGGTTGCACAAGGGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGt                                                                                                                                                    <  2:794702/147‑1 (MQ=37)
     atcaaGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTa                                                                                                                                               <  2:1745670/150‑1 (MQ=255)
      tcaaGACGGGTGGCTTCCTGTGTTGGTTGCACACGTGCGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACACGTAGTGCACCGCCTGAGCGGGGTGTGGTGAACCTTTCGGAGGGGGTTTACCCGCGAAGAGGCCAGTACTTac                                                                                                                                              <  2:2551215/150‑1 (MQ=37)
      tcaaGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGGAAAACCCCTCCAACAAGTAGTTCACCGCCGGAGGGGGCTGTGGTGTACCAGTAGGAGCGGGTTTAACCCCCAAGAGGCCCGGACTTac                                                                                                                                              >  1:3568630/1‑150 (MQ=255)
         agaagGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAAGTACTGCACCGCCTGAGAGGGCGGTGGGGAACCTGGAGGAGCGGGGTTACCCGCGAACAGGCCAGTCCTTacaac                                                                                                                                           >  2:3820699/1‑150 (MQ=38)
            agGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTacaacaca                                                                                                                                        <  2:2679088/150‑1 (MQ=255)
             gggTGGCTTCCTGAGTTGGTCCCACACGTCACCCTGTCCCGGCCTCTACGCGGGAAAACCCCACCCAACAACTACCCCACCGCCTGACAGGGCTGTGGTCAACCTGACGGAGCGGTTTTACCCGCGAAGAGGCCAGTACTTacaacacaa                                                                                                                                       <  2:1042980/150‑1 (MQ=255)
                   cTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTGGGGGTTAAACCCGCTCCTACATGTAGTGCACCGCCTGAGTGGGCTTTGGTGAACCTGTAGGAGGGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCa                                                                                                                                 <  2:2763515/150‑1 (MQ=38)
                                      aaGTGAGCCTGTGCCGGCCTCTTCGCGGGTTAACCCCCACCAACAAGTATTGCAACCCCGGAGAGGGCTGTGGTGAAACAGTAGGAGCCGGGTTAACCCCCAAGAGGCCCGTAAATACAACAAAACCCGCAGGCACAGCCCCGCCGGGTa                                                                                                              >  2:2116951/1‑150 (MQ=255)
                                             ccTGTGCCGGCCTCTTCGCGGGTAAAACCGCTCCAACAAGTAGTGCACCGCCGGAGAGGGCTGGGGTGAACCGGTAGGAGCGGGTTTAACCCCGAAGAGGCCAGTACTTACAAAACAAACCACAGGCACTGCCCCGCCTGGGACAGCGaa                                                                                                       >  2:1325976/1‑150 (MQ=255)
                                                     GGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGa                                                                                               >  2:4044491‑M1/1‑150 (MQ=255)
                                                        ctctTCGCGGGTAAACCCGCTCCGACAAGTAGTGCACCGCCTGCGAGGGCTGTGGTGAACCGGGAGGAGCGGGTTTACCCCCGCAGAGGCCAGTACGTACAACACAACCCGCAGGCCCTGCCCCGCGTGGTACAGCGAAAAACCCGCCTc                                                                                            >  2:2973398/1‑150 (MQ=255)
                                                            TCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAg                                                                                        <  2:4918753‑M1/150‑1 (MQ=255)
                                                              ggGGGTAAACCCGCTCCTACACGTCGGGCACCGCCTGAGAGGGGTGTGGTGAACCTGTCGGCGGGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGaa                                                                                      >  2:2443171‑M1/3‑150 (MQ=255)
                                                              GCGGGTAAACCCGCTCCTACCAGTAGTGCACCGCCTGTGAGGGCTGTGGTTAACCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGaa                                                                                      >  2:713353‑M1/1‑150 (MQ=255)
                                                              GCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGaa                                                                                      <  2:638362‑M1/150‑1 (MQ=255)
                                                              GCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGaa                                                                                      <  2:638260‑M1/150‑1 (MQ=255)
                                                               CGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAAc                                                                                     <  2:517877‑M1/150‑1 (MQ=255)
                                                                GGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAGCCGGACTCCTAGAACg                                                                                    <  1:4525179‑M1/150‑1 (MQ=255)
                                                                    AAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGt                                                                                >  1:4978925‑M1/1‑150 (MQ=255)
                                                                     cACCCGCGCCGACCAGTAGGGCACCGCCGGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTGACCCCACCCCCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTc                                                                               >  2:4525179‑M1/2‑150 (MQ=255)
                                                                      ACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCt                                                                                  <  1:3666735‑M1/146‑1 (MQ=255)
                                                                      ACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCt                                                                                  >  2:3666735‑M1/1‑146 (MQ=255)
                                                                      ACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTcc                                                                              <  2:3005587‑M1/150‑1 (MQ=255)
                                                                       cccgctcctacaggttcaccacagccctctcaggcggtgcactacttgtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCg                                                                             >  1:2745820‑M2/77‑150 (MQ=255)
                                                                       cccGCTCCTACAAGAAGAGCACCGCCACACAGGGCTCTGGTGAACCTCTAGCAGCGCGATAACCCGCGAAGAGGCCAGTACTAACAACACAACCCACACGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCAAAGAACGCTGAccc                                                                             >  1:443110/1‑149 (MQ=255)
                                                                       CCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTacaacaca                                                                                                                                        <  2:4271153‑M1/91‑1 (MQ=255)
                                                                        ccgctcctacaggttcaccacagccctctcaggcggtgcactacttgtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGc                                                                            >  2:1698622‑M2/76‑150 (MQ=255)
                                                                        ccgctcctacaggttcaccacagccctctcaggcggtgcactacttgtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGc                                                                            >  2:3675467‑M2/76‑150 (MQ=255)
                                                                        CCGCTCCTCCACGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGc                                                                            >  2:4330978‑M1/1‑150 (MQ=255)
                                                                         cgctcctacaggttcaccacagccctctcaggcggtgcactacttgtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCa                                                                           <  1:3675467‑M2/76‑1 (MQ=255)
                                                                          gctcctacaggttcaccacagccctctcaggcggtgcactacttgtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTACCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAg                                                                          >  1:4299382‑M2/74‑150 (MQ=255)
                                                                            tcctacaggttcaccacagccctctcaggcggtgcactacttgtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCg                                                                        >  2:889612‑M2/72‑150 (MQ=255)
                                                                             CCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGa                                                                       >  1:3005587‑M1/1‑150 (MQ=255)
                                                                              CTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGaa                                                                      <  1:559694‑M1/150‑1 (MQ=255)
                                                                              CTACAAGTAATGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGaa                                                                      <  2:2054309‑M1/150‑1 (MQ=255)
                                                                               tacaggttcaccacagccctctcaggcggtgcactacttgtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAg                                                                     >  2:2175413‑M2/69‑150 (MQ=255)
                                                                               TACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAg                                                                     <  1:826658‑M1/150‑1 (MQ=255)
                                                                                   ctttgtccACCGCCGTAGTGGGGTGTGTTCAACCTTTTGGTGGGGTTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGgcgc                                                                 <  1:2366219/143‑1 (MQ=255)
                                                                                    gttcaccacagccctctcaggcggtgcactacttgtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGa                                                                                               >  1:2084821‑M2/64‑119 (MQ=255)
                                                                                    gttcaccacagccctctcaggcggtgcactacttgtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGa                                                                                               <  2:2084821‑M2/56‑1 (MQ=255)
                                                                                    gtagtGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGgcgcg                                                                <  2:5079219/150‑1 (MQ=255)
                                                                                      tcaccacagccctctcaggcggtggtgaacctgtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCt                                                              >  2:2821842‑M2/62‑150 (MQ=255)
                                                                                      cgtGCACCGCCTGAGAGGGCTGTGGTGCACCTGTAGGAGCGGGTTGACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCt                                                              <  2:3113774/149‑1 (MQ=255)
                                                                                      agtGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCt                                                              <  2:849796/150‑1 (MQ=255)
                                                                                         gCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTcac                                                           >  2:3514478/1‑150 (MQ=255)
                                                                                          cACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTcaca                                                          >  2:3048142/1‑150 (MQ=255)
                                                                                          cACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTcaca                                                          <  2:4003084/150‑1 (MQ=255)
                                                                                          cACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTcaca                                                          >  1:5399654/1‑150 (MQ=255)
                                                                                          cACCGCATGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTcaca                                                          >  2:438579/1‑150 (MQ=255)
                                                                                           aCCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGACAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCacac                                                         <  2:1009290/150‑1 (MQ=255)
                                                                                             cGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCg                                                       >  1:1143940/1‑150 (MQ=255)
                                                                                             cGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCg                                                       >  1:3028255/1‑150 (MQ=255)
                                                                                                  gagaGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCAt                                                  >  2:1144490/1‑150 (MQ=255)
                                                                                                  gagaGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCAt                                                  >  2:4442698/1‑150 (MQ=255)
                                                                                                   agagGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATc                                                 <  2:3610741/150‑1 (MQ=255)
                                                                                                     agGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCgg                                               >  2:1708934/1‑150 (MQ=255)
                                                                                                      ggggTGTGGTGAACGTGATGGCGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGc                                              <  1:348033/150‑1 (MQ=255)
                                                                                                         cTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGaa                                           >  1:3526254/1‑150 (MQ=255)
                                                                                                          tgtgGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGaaa                                          >  1:3338670/1‑150 (MQ=255)
                                                                                                              gtgAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACgg                                      >  1:2105154/1‑150 (MQ=255)
                                                                                                              gtgAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACgg                                      >  2:1510024/1‑150 (MQ=255)
                                                                                                                gAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGaa                                    >  2:2661646/1‑150 (MQ=255)
                                                                                                                gAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGaa                                    >  2:209520/1‑150 (MQ=255)
                                                                                                                gAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGaa                                    >  1:3890133/1‑150 (MQ=255)
                                                                                                                 aaCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAAt                                   >  1:1568132/1‑150 (MQ=255)
                                                                                                                    cTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGaaaa                                         <  2:2589063/141‑1 (MQ=255)
                                                                                                                    cTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGaaaa                                         >  1:2589063/1‑141 (MQ=255)
                                                                                                                    cTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCgg                                >  1:4789003/1‑150 (MQ=255)
                                                                                                                      gtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCa                              <  2:4789003‑M2/121‑1 (MQ=255)
                                                                                                                        tggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAgg                            <  1:5064492‑M2/123‑1 (MQ=255)
                                                                                                                          gagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCt                          >  2:3222972‑M2/26‑150 (MQ=255)
                                                                                                                            gcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGt                        >  2:620348‑M2/24‑150 (MQ=255)
                                                                                                                              gggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTcc                      <  2:693577‑M2/129‑1 (MQ=255)
                                                                                                                                gtttacccgcgaagaggccGGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGc                    <  1:2711058‑M2/131‑1 (MQ=255)
                                                                                                                                gtttacccgcgaagaggccGGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGc                    >  2:2711058‑M2/20‑150 (MQ=255)
                                                                                                                                gtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGc                    >  2:3392631‑M2/20‑150 (MQ=255)
                                                                                                                                 tttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGTCTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGcc                   <  1:1724776‑M2/132‑1 (MQ=255)
                                                                                                                                      ccgcgaagaggccAGTACTTACACCACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCGGACagcctgccg              <  1:2408219‑M2/137‑5 (MQ=255)
                                                                                                                                      ccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGcc              <  1:2907581‑M2/137‑1 (MQ=255)
                                                                                                                                      ccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGcc              >  1:2230342‑M2/14‑150 (MQ=255)
                                                                                                                                      ccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCAAAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGcc              >  2:772383‑M2/14‑150 (MQ=255)
                                                                                                                                       cgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGccc             <  2:5421985‑M2/138‑1 (MQ=255)
                                                                                                                                        gcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCt            >  1:1006247‑M2/12‑150 (MQ=255)
                                                                                                                                          gaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTg          >  2:5082560‑M2/10‑150 (MQ=255)
                                                                                                                                           aagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGa         <  2:3338670‑M2/142‑1 (MQ=255)
                                                                                                                                           aagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGa         <  1:3048142‑M2/142‑1 (MQ=255)
                                                                                                                                           aagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGa         <  1:3111695‑M2/142‑1 (MQ=255)
                                                                                                                                             gaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGAGc       >  2:4828517‑M2/7‑150 (MQ=255)
                                                                                                                                             gaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGAGc       <  1:2322442‑M2/144‑1 (MQ=255)
                                                                                                                                              aggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGAGCa      <  2:2178826‑M2/145‑1 (MQ=255)
                                                                                                                                                gccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGAGCAgg    >  2:4091504‑M2/4‑150 (MQ=255)
                                                                                                                                                gccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACAGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGAGCAgg    >  1:114123‑M2/4‑150 (MQ=255)
                                                                                                                                                 ccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATATAACGCAGTCAGCAGCGAAGGCGCGATCACACCTCTCATCGTCGAAAACGGAATCGGCAGGCTGTCAGCCTCGCCCTTGAGCAGGa   >  1:1213871‑M2/3‑150 (MQ=255)
                                                                                                                                                  cAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGTAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCa                              <  1:5214815‑M2/121‑1 (MQ=255)
                                                                                                                                                  cAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCa                              >  2:5214815‑M2/2‑122 (MQ=255)
                                                                                                                                                  cAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGa         >  2:5415964‑M2/2‑143 (MQ=255)
                                                                                                                                                  cAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGa         <  1:5415964‑M2/142‑1 (MQ=255)
                                                                                                                                                  cAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGAGCAGGaa  >  2:2255532‑M2/2‑150 (MQ=255)
                                                                                                                                                  cAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGAGCAGGaa  >  1:4347289‑M2/2‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
CTTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACTCATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGAGCAGGAA  >  NC_002947/6002828‑6003123

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.