Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,531,275 C→A 7.8% intergenic (+35/+13) lpxC → / ← PP_1344 UDP‑3‑O‑[3‑hydroxymyristoyl] N‑acetylglucosamine deacetylase/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,531,2750CA 7.8% 608.4 / 28.0 187intergenic (+35/+13)lpxC/PP_1344UDP‑3‑O‑[3‑hydroxymyristoyl] N‑acetylglucosamine deacetylase/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (106/66);  new base A (10/5);  total (116/71)
Fisher's exact test for biased strand distribution p-value = 7.87e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 188 total aligned reads displayed.

GAACAACCAGCTGTTGCGCAAGCTGATTGCTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGCATGCCCGCCACGCTTG  >  NC_002947/1531126‑1531423
                                                                                                                                                     |                                                                                                                                                    
    aacCAGCTGTTGCGCAAGCTGATTGCTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGt                                                                                                                                                  <  1:586807/150‑1 (MQ=255)
        aGCTGTTGCGCAAGCTGATTGCTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGcc                                                                                                                                              >  2:4301247/1‑150 (MQ=255)
           tGTTGCGCAAGCTGATTGCTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCttt                                                                                                                                           >  1:1109804/1‑150 (MQ=255)
           tGTTGCGCAAGCTGATTGCTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCttt                                                                                                                                           >  2:1088328/1‑150 (MQ=255)
            gTTGCGCAAGCTGATTGCTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCtttt                                                                                                                                          <  2:4005489/150‑1 (MQ=255)
            gTTGCGCAAGCTGATTGCTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCCGAAGGTGGCCttaa                                                                                                                                          <  2:1114535/150‑3 (MQ=255)
             ttGCGCAAGCTGATTGCTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCttttt                                                                                                                                         >  2:3950575/1‑150 (MQ=255)
             ttGCGCAAGCTGATTGCTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCttttt                                                                                                                                         <  1:2077557/150‑1 (MQ=255)
               gcgcAAGCTGATTGCTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTa                                                                                                                                       <  2:793593/150‑1 (MQ=255)
               gcgcAAGCTGATTGCTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTACGGGTGGCCTTTTTTa                                                                                                                                       >  2:4477777/1‑150 (MQ=255)
                cgcAAGCTGATTGCTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTAt                                                                                                                                      <  1:2903584/150‑1 (MQ=255)
                 gcAAGCTGATTGCTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATg                                                                                                                                     >  1:4727036/1‑150 (MQ=255)
                   aaGCTGATTGCTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCATGTTTATGGc                                                                                                                                   >  2:2292623/1‑150 (MQ=255)
                        gATTGCTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGcc                                                                                                                              <  1:4811997/150‑1 (MQ=255)
                         aTTGCTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCGTGccc                                                                                                                             >  1:2676397/1‑150 (MQ=255)
                         aTTGCTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGACAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGccc                                                                                                                             >  1:965800/1‑150 (MQ=255)
                          ttGCTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCt                                                                                                                            <  2:1936098/150‑1 (MQ=255)
                           tGCTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTg                                                                                                                           <  1:643548/150‑1 (MQ=255)
                            gCTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGGACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTgg                                                                                                                          <  1:3349435/150‑1 (MQ=255)
                             cTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTggg                                                                                                                         >  1:2664421/1‑150 (MQ=255)
                             cTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCGCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTggg                                                                                                                         >  1:2464453/1‑150 (MQ=255)
                              tGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCGCCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGc                                                                                                                        >  1:1368207/1‑150 (MQ=255)
                              tGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGTGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGc                                                                                                                        >  1:5270429/1‑150 (MQ=255)
                              tGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGc                                                                                                                        >  1:3858966/1‑150 (MQ=255)
                              tGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGc                                                                                                                        >  1:2587348/1‑150 (MQ=255)
                                  aCCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTgg                                                                                                                    <  2:2732528/150‑1 (MQ=255)
                                  aCCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTgg                                                                                                                    <  2:3550814/150‑1 (MQ=255)
                                    cGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGGTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGgc                                                                                                                  >  2:690540/1‑150 (MQ=255)
                                     gATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCGGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCGTGGGCGTGGgcc                                                                                                                 >  2:1745873/1‑150 (MQ=255)
                                     gATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGgcc                                                                                                                 >  2:1146635/1‑150 (MQ=255)
                                     gATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGgcc                                                                                                                 >  1:345553/1‑150 (MQ=255)
                                     gATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGgcc                                                                                                                 >  2:4815930/1‑150 (MQ=255)
                                      aTGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGgccg                                                                                                                >  1:794110/1‑150 (MQ=255)
                                       tGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGgccgc                                                                                                               <  2:3143195/150‑1 (MQ=255)
                                       tGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGgccgc                                                                                                               <  2:3143208/150‑1 (MQ=255)
                                           tGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAAc                                                                                                           >  2:5402666/1‑150 (MQ=255)
                                           tGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAAc                                                                                                           >  1:2112641/1‑150 (MQ=255)
                                           tGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAAc                                                                                                           >  1:2721434/1‑150 (MQ=255)
                                           tGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAAc                                                                                                           <  1:757767/150‑1 (MQ=255)
                                                aGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTc                                                                                                      <  2:2158319/150‑1 (MQ=255)
                                                 gTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTcc                                                                                                     <  1:2222866/150‑1 (MQ=255)
                                                  tGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCa                                                                                                    >  1:4037210/1‑150 (MQ=255)
                                                    gTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGt                                                                                                  >  2:4250162/1‑150 (MQ=255)
                                                     tCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTg                                                                                                 >  2:338496/1‑150 (MQ=255)
                                                             gAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGc                                                                                         >  1:5364905/1‑150 (MQ=255)
                                                              aaGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCa                                                                                        >  1:4098901/1‑150 (MQ=255)
                                                              aaGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCa                                                                                        <  2:2022514/150‑1 (MQ=255)
                                                                gATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGt                                                                                      >  1:3107665/1‑150 (MQ=255)
                                                                  tGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGTTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGttt                                                                                    <  1:4312953/150‑1 (MQ=255)
                                                                      aGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTgggg                                                                                <  2:641166/150‑1 (MQ=255)
                                                                      aGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTgggg                                                                                >  2:1846751/1‑150 (MQ=255)
                                                                          cGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAGCACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCgg                                                                            <  1:4281732/150‑1 (MQ=255)
                                                                           ggCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGt                                                                           >  2:3601798/1‑150 (MQ=255)
                                                                                  aTCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTGTGGGGTCGGTAATGccc                                                                    >  2:2952929/1‑150 (MQ=255)
                                                                                     tcGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTcg                                                                 >  1:1916230/1‑150 (MQ=255)
                                                                                           aTGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGgtg                                                           <  2:307160/150‑1 (MQ=255)
                                                                                             gcgcCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTc                                                         <  1:997288/150‑1 (MQ=255)
                                                                                               gcCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTcgc                                                       >  1:584686/1‑150 (MQ=255)
                                                                                                    gTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAgg                                                  <  1:3525479/150‑1 (MQ=255)
                                                                                                    gTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAgg                                                  <  2:1838041/150‑1 (MQ=255)
                                                                                                         ggCCGTGTAAGTTCGAACCCTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCtctc                                             <  1:743702/150‑1 (MQ=255)
                                                                                                         ggCCGTGTAAGTTCGAACACTCTCTAGGTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCtctc                                             >  2:3261758/1‑150 (MQ=255)
                                                                                                            cGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGc                                          >  2:2601257/1‑150 (MQ=255)
                                                                                                                tAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCcgcg                                      >  1:4527993/1‑150 (MQ=255)
                                                                                                                tAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCcgcg                                      >  1:4833777/1‑150 (MQ=255)
                                                                                                                tAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCcgcg                                      >  1:130980/1‑150 (MQ=255)
                                                                                                                  aGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCt                                    <  1:2354029/150‑1 (MQ=255)
                                                                                                                  aGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCt                                    <  1:3717762/150‑1 (MQ=255)
                                                                                                                  aGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCACt                                    >  2:1708878/1‑150 (MQ=255)
                                                                                                                    ttCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGt                                  >  2:2674118/1‑150 (MQ=255)
                                                                                                                     tCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGtt                                 <  1:3424732/150‑1 (MQ=255)
                                                                                                                         acacTCTCGAGGTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGaa                             <  2:4386465/150‑1 (MQ=255)
                                                                                                                          cacTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGaaa                            <  1:4118703/150‑1 (MQ=255)
                                                                                                                          cacTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGaaa                            <  1:4301247/150‑1 (MQ=255)
                                                                                                                          cacTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGaaa                            >  2:4624733/1‑150 (MQ=255)
                                                                                                                             tctctAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCt                         >  2:2015957/1‑150 (MQ=255)
                                                                                                                             tctctAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCt                         >  2:4564395/1‑150 (MQ=255)
                                                                                                                             tctctAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCt                         >  1:1778392/1‑150 (MQ=255)
                                                                                                                              ctctAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTc                        >  2:1920571/1‑150 (MQ=255)
                                                                                                                               tctAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCg                       >  1:1114399/1‑150 (MQ=255)
                                                                                                                                   gTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCg                   >  1:1201631/1‑150 (MQ=255)
                                                                                                                                    ttCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGc                  >  1:1338581/1‑150 (MQ=255)
                                                                                                                                    ttCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGc                  >  2:2293274/1‑150 (MQ=255)
                                                                                                                                    ttCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGc                  >  2:4752021/1‑150 (MQ=255)
                                                                                                                                     taaaaaaGGCCACCCGAAGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTGTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGCa                 >  2:1679765/6‑150 (MQ=255)
                                                                                                                                     tCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGGTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGCa                 <  2:2464453/150‑1 (MQ=255)
                                                                                                                                      cATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTg                                   <  2:3356235/131‑1 (MQ=255)
                                                                                                                                      aaaaaaGGCCACCCGAAGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGgtgt                                                          >  2:404365/5‑108 (MQ=255)
                                                                                                                                       aTTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGCATg               <  2:12676/150‑1 (MQ=255)
                                                                                                                                        ttAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCaa                                                                                                            >  2:617114/1‑56 (MQ=255)
                                                                                                                                        ttAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGCATGc              >  1:2839137/1‑150 (MQ=255)
                                                                                                                                        ttAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGCATGc              >  1:2878869/1‑150 (MQ=255)
                                                                                                                                         tAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGCATGcc             <  2:1109804/150‑1 (MQ=255)
                                                                                                                                         aaaGGCCACCCGAAGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGCATGcc             >  1:3891884/2‑150 (MQ=255)
                                                                                                                                          aaGGCCACCTTCGGGTGGCCATTATTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCACGGCCGCGCTGTTCGAAAGCTCGGCCGCATTccc            <  2:3850554/150‑1 (MQ=255)
                                                                                                                                          aaGGCCACCCGAAGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGCATGccc            >  1:854250/1‑150 (MQ=255)
                                                                                                                                            ggCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGCATGCCCGc          >  2:2392552/1‑150 (MQ=255)
                                                                                                                                             gCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGCATGCCCGcc         >  1:4235582/1‑150 (MQ=255)
                                                                                                                                               cACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGCATGCCCGCCAc       >  2:3687122/1‑150 (MQ=255)
                                                                                                                                                    tCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGCATGCCCGCCACGCTTg  <  2:1368207/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
GAACAACCAGCTGTTGCGCAAGCTGATTGCTGAAACCGATGCCTGGGAAGTGGTCACTTTCGAAGATGCCAGCACGGCACCGATCTCGTACATGCGCCCTGTTGCGGCCGTGTAAGTTCGAACACTCTCTAGTTCATTAAGGCCACCTTCGGGTGGCCTTTTTTATGGCTTGCCCTGGGCGTGGGCCGCCAACCGTTCCAGTGCGGCACGCAGTTTGGGGTCGGTAATGCCCTCGGCGGTGTCGCGCAGGCTCTCGGCCGCGCTGTTCGAAAGCTCGGCCGCATGCCCGCCACGCTTG  >  NC_002947/1531126‑1531423

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: