Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,615,732 A→T 7.0% F21Y (TTT→TAT) ‡ PP_1415 ← membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,615,7320AT 7.0% 434.5 / 18.1 143F21Y (TTT→TAT) ‡PP_1415membrane protein
Reads supporting (aligned to +/- strand):  ref base A (85/48);  new base T (4/6);  total (89/54)
Fisher's exact test for biased strand distribution p-value = 1.78e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.18e-01

Only 100 of 147 total aligned reads displayed.

CAATACCGATGCCGATGATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGCCCAGATGCC  >  NC_002947/1615586‑1615881
                                                                                                                                                  |                                                                                                                                                     
cAATACCGATGCCGATGATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAAc                                                                                                                                                    >  2:247242/1‑150 (MQ=255)
   tACCGATGCCGATGATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGc                                                                                                                                                 <  1:4242457/150‑1 (MQ=255)
   tACCGATGCCGATGATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGc                                                                                                                                                 <  1:81379/150‑1 (MQ=255)
     ccgatgccgatgATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCa                                                                                                                                               <  1:4379411/150‑1 (MQ=255)
      cgatgccgatgATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAg                                                                                                                                              >  1:3144826/1‑150 (MQ=255)
         tgccgatgATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGTTTTGCCGCCAGCaa                                                                                                                                           <  1:2351747/150‑1 (MQ=255)
         tgccgatgATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAATCCGCCAGCaa                                                                                                                                           <  2:1254847/150‑1 (MQ=255)
         tgccgatgATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCaa                                                                                                                                           <  2:14847/150‑1 (MQ=255)
         tgccgatgATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCaa                                                                                                                                           <  2:1254647/150‑1 (MQ=255)
          gccgatgATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAg                                                                                                                                          <  2:4405030/150‑1 (MQ=255)
             gatgatCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCCGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCCAAACCGCCAGCAAGGcc                                                                                                                                       >  1:3660809/1‑150 (MQ=255)
             gatgatCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGcc                                                                                                                                       >  1:3915073/1‑150 (MQ=255)
             gatgatCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGcc                                                                                                                                       >  1:3660709/1‑150 (MQ=255)
             gatgatCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAAACGCCAGCAAGGcc                                                                                                                                       >  1:1062369/1‑150 (MQ=255)
             gatgatCCACTGCCCGCACTCGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCACGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTCCTGGCGGTTTTGCCGCCAGCAAggtc                                                                                                                                       <  2:3466125/150‑3 (MQ=255)
                   ccACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCCGCAAGGCCGACCAg                                                                                                                                 >  2:4702964/1‑150 (MQ=255)
                   ccACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCCACCAg                                                                                                                                 >  1:635310/1‑150 (MQ=255)
                     aCTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGc                                                                                                                                                 <  2:5102122/132‑1 (MQ=255)
                     aCTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGcc                                                                                                                               >  2:5172368/1‑150 (MQ=255)
                         cccGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGt                                                                                                                           >  2:4346616/1‑150 (MQ=255)
                           cGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAACGCCGACCCGCCCGGTcg                                                                                                                         >  1:5174209/1‑150 (MQ=255)
                            gCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCCCCAGCAAGGCCGACCAGCCCGGTcgc                                                                                                                        >  1:2327572/1‑150 (MQ=255)
                             cACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCATGCAGGCGGCAAAACCCCCACCAAAGCCGACCACCCCCGgcgcc                                                                                                                       >  1:952556/1‑149 (MQ=255)
                              aCTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGcga                                                                                                                      <  2:3583048/150‑1 (MQ=255)
                              aCTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGcga                                                                                                                      <  2:5346251/150‑1 (MQ=255)
                               cTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGc                                                                                                                                                 >  1:5133180/1‑122 (MQ=255)
                                ttGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCATGCATGCGGCAAAAACCCCAGCAAAGCCCACCACCCCCGTCGcgacc                                                                                                                    >  1:2436033/1‑149 (MQ=255)
                                     gCCGTTGGGGTTTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATTAACCGACCATCCATGGCAACGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACaa                                                                                                               <  2:3472197/150‑1 (MQ=255)
                                       cGTTGGGTATTTCCTAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGAACTCAATCAATTAACCCACCATCAATGGCAACGCCCAGCCTACCTTGCTGGCGGAAAAACCCACACCAAGCCCGACCAGCCCGGTCGCGACGAACAAtc                                                                                                             <  1:4546664/150‑2 (MQ=255)
                                         ttGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGc                                                                                                           >  2:3179638/1‑150 (MQ=255)
                                         ttGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGc                                                                                                           >  1:2684953/1‑150 (MQ=255)
                                             ggATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACg                                                                                                       >  2:2121192/1‑150 (MQ=255)
                                             ggATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAAACATGGCAACg                                                                                                       >  1:4233086/1‑150 (MQ=255)
                                              gATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAAAGGCAACGa                                                                                                      >  1:604540/1‑150 (MQ=255)
                                                 ttCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCg                                                                                                   >  2:3386581/1‑150 (MQ=255)
                                                 ttCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCg                                                                                                   >  1:1152207/1‑150 (MQ=255)
                                                    cGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATc                                                                                                >  1:1201161/1‑150 (MQ=255)
                                                    cGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATc                                                                                                >  2:3545165/1‑150 (MQ=255)
                                                     gAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCa                                                                                               >  1:4507094/1‑150 (MQ=255)
                                                      aaaGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAg                                                                                              >  2:4272178/1‑150 (MQ=255)
                                                        aGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAAACGCCAGCAAGGCCGACCACCACGGTCGCCACCAACAATGGCAACGACCGAACAGGc                                                                                            >  1:3294335/1‑150 (MQ=255)
                                                             ccAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCgg                                                                                       >  2:3216505/1‑150 (MQ=255)
                                                             ccAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGGCGCGACGAACAATGGCCACGACCGATCAGGCATCgg                                                                                       >  1:230485/1‑150 (MQ=255)
                                                                aCGCGTCTGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAACGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCa                                                                                    <  1:4963548/150‑1 (MQ=255)
                                                                  gcgTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAgg                                                                                  >  2:4566020/1‑150 (MQ=255)
                                                                       aGGCCGCGCACCAGGATGATCGCCAGCAATGAACCGACCCTCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAACACCGCCAGCAAGGCCGACCCGCCCGGGCGCGACGAACAATGGCCCCGACCGCTCAGGCCTCGGCCAGGGCCCg                                                                             >  2:3257734/1‑150 (MQ=255)
                                                                         gCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGgc                                                                           >  2:46401/1‑150 (MQ=255)
                                                                           aGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAgg                                                                                                                                         >  1:749990/1‑86 (MQ=255)
                                                                           aGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAgg                                                                                                                                         <  2:749990/86‑1 (MQ=255)
                                                                                aCCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAg                                                                    >  2:3567852/1‑150 (MQ=255)
                                                                                     gatgatCGCCAGCAATGACCCGACCAGCCATGGCAAAGGCCAGCCGACCTGGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGGAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGc                                                               <  2:3864852/150‑1 (MQ=255)
                                                                                     gatgatCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGc                                                               >  1:809119/1‑150 (MQ=255)
                                                                                     gatgatCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACAAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGc                                                               <  2:3257755/150‑1 (MQ=255)
                                                                                     gatgatCCCCAGCAATCACCCCACCACCCATGGCACCGCCCCGCCGACCTTGCTGGCGGAAAACCCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGc                                                               <  1:3038045/150‑1 (MQ=255)
                                                                                         atCGCAAGCATTGACCCCACCATCCTTGCCAACGGCCCGCCGACCTGGCTGGCGCCAAACCCGCCAGCACGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGttt                                                           <  1:4220546/150‑1 (MQ=255)
                                                                                           cGCCAGCAATCAACCGCCCACCCATGGCAACGCCCAGCCGCCCTGGCGGGCGGCAAACCCGCCAGCACGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTgc                                                         <  2:228932/150‑1 (MQ=255)
                                                                                             ccAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTgcgc                                                       <  2:809108/150‑1 (MQ=255)
                                                                                             ccAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTgcgc                                                       >  1:4896476/1‑150 (MQ=255)
                                                                                              cAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTTGCGGCAAAAACGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGcc                                                      >  1:129530/1‑150 (MQ=255)
                                                                                              cAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCCGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTGTGCGcc                                                      >  2:814944/1‑150 (MQ=255)
                                                                                                   aTGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATg                                                 >  2:4449312/1‑150 (MQ=255)
                                                                                                   aTGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATg                                                 >  2:837821/1‑150 (MQ=255)
                                                                                                     gAACCGACCATCCTTGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCTGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATgcg                                               <  1:3926130/150‑1 (MQ=255)
                                                                                                     gAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATgcg                                               >  2:36669/1‑150 (MQ=255)
                                                                                                     gAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATgcg                                               >  2:4772005/1‑150 (MQ=255)
                                                                                                          gACCATCCTGGGCAACGGCCAGCCGCCGTTGCTGGCGGAAAAACCGCCAGCTCGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCgcagca                                          <  1:2142480/150‑1 (MQ=255)
                                                                                                          gACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCgcagca                                          >  2:2600087/1‑150 (MQ=255)
                                                                                                             catccatGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGTGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCg                                       >  2:5001314/1‑150 (MQ=255)
                                                                                                              atccatGGCAACGGCCAGCCGACCTGGCGGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCgg                                      <  2:2780686/150‑1 (MQ=255)
                                                                                                              acccatGGCAAAGGCCAGCCGACCTTGCGGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCgg                                      <  2:2780599/148‑1 (MQ=255)
                                                                                                               tccatGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGGCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGc                                     >  2:2166339/1‑150 (MQ=255)
                                                                                                                ccttGGCAACGGCCAGCCGACGGGGCGGGCGGAAACACCCCCAGCACGCCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCa                                    <  1:1859094/147‑1 (MQ=255)
                                                                                                                ccatGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCa                                    <  2:4935508/150‑1 (MQ=255)
                                                                                                                 catGGCAACGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAg                                   <  2:2699524/150‑1 (MQ=255)
                                                                                                                  atGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCCAGGCCGACCAGCCCGGTCGCGACGAAAAATGGCAACGACCGATAAGGCAACGGCCAGGGCCCCGCGCTGCAGGCTGCGTTTTCGCCAGATTCGCAGCAGCGGCAgg                                  >  1:986590/1‑150 (MQ=255)
                                                                                                                     gCAACGGCCAGCCGACCGTGCTGGCGGCAAAACCGCCAGCACGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCg                               <  2:1755966/150‑1 (MQ=255)
                                                                                                                     gCAAAGGCCAGCCGACCTTGCTGGCGGCCAAACCCCCAGCAAGGCCGACCAGCCCCGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTTCGCCAGATGCGCAGCAGCGGCAGGGCg                               >  1:4794203/1‑150 (MQ=255)
                                                                                                                      cAAAGGCCAGCCGACCTGGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGa                              <  1:4348311/150‑1 (MQ=255)
                                                                                                                       aaaGGCCAGCCGACCTTGCTGGCGGCAAAAACGCCAGAAAGGCCGAACAGCCCGGTCGCGAAGAACAAATGCAAAGAACGATCAGGCATATGCCATGGCCCGGCGCAGCAGGCTGCGTTTTCGCCAGATTCGCAGCAGCGGCAGGGCGAg                             >  1:5276724/1‑150 (MQ=255)
                                                                                                                        acgccccgCCGACCTGGCTGGCGGAAAAACCGCCAGCACGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGc                            <  1:1917994/143‑1 (MQ=255)
                                                                                                                        aaGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGc                            >  2:5264359/1‑150 (MQ=255)
                                                                                                                         aGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCa                           >  2:5428332/1‑150 (MQ=255)
                                                                                                                            ccAGACGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGAGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTa                        >  2:5363233/1‑150 (MQ=255)
                                                                                                                               gCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGt                                                             <  1:3568629/110‑1 (MQ=255)
                                                                                                                               gCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGt                                                             <  1:3568557/110‑1 (MQ=255)
                                                                                                                               gCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGt                                                             >  2:3568629/1‑110 (MQ=255)
                                                                                                                               gCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCa                     <  2:5118807/150‑1 (MQ=255)
                                                                                                                               ccccaCCTTGCTGGGGGAAAACCCGCAAGCACGCCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCATGGCGAGCATTACCa                     <  1:2792761/146‑1 (MQ=255)
                                                                                                                                   gccTTGCTGGCGGTTTTGCCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCCGGGCGAGCATTACCACTAc                 >  2:4716743/2‑150 (MQ=255)
                                                                                                                                   gccTTGCTGGCGGTTTTGCCGCCAGCAAGGCCCACCAGCCCGGTCGCGACGAAAAATGGCAACGACCGATCAGGCAACGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACAAc                 >  2:2275068/2‑150 (MQ=255)
                                                                                                                                   aCCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTAc                 <  1:2033799/150‑1 (MQ=255)
                                                                                                                                     cTTGCTGGCGGTTTTGCCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGtt                                                            >  1:2191145/1‑105 (MQ=38)
                                                                                                                                     cTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCa               >  1:2067299/1‑150 (MQ=255)
                                                                                                                                          tGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCATGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCAGTACCACTACCCGCGcc          >  2:4155994/1‑150 (MQ=255)
                                                                                                                                          tGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGcc          >  2:2417296/1‑150 (MQ=255)
                                                                                                                                          tGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGcc          >  1:1582710/1‑150 (MQ=255)
                                                                                                                                          tGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGAGGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGcc          >  2:3967497/1‑150 (MQ=255)
                                                                                                                                            gcggcAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGCCCa        >  2:5331994/1‑150 (MQ=255)
                                                                                                                                              ggaaaaaCCGCCATCAACCCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCTCCCAGa      <  2:1762664/147‑1 (MQ=255)
                                                                                                                                               gaaaaaCCGACAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGCCCAGAt     <  1:4346378/148‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                     
CAATACCGATGCCGATGATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGCCCAGATGCC  >  NC_002947/1615586‑1615881

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑