Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,615,734 A→G 7.0% G20G (GGT→GGC)  PP_1415 ← membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,615,7340AG 7.0% 409.6 / 12.2 143G20G (GGT→GGC) PP_1415membrane protein
Reads supporting (aligned to +/- strand):  ref base A (85/40);  new base G (4/6);  total (89/54)
Fisher's exact test for biased strand distribution p-value = 8.93e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 148 total aligned reads displayed.

CAATACCGATGCCGATGATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGCCCAGATGCCCA  >  NC_002947/1615586‑1615883
                                                                                                                                                    |                                                                                                                                                     
cAATACCGATGCCGATGATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAAc                                                                                                                                                      >  2:247242/1‑150 (MQ=255)
   tACCGATGCCGATGATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGc                                                                                                                                                   <  1:4242457/150‑1 (MQ=255)
   tACCGATGCCGATGATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGc                                                                                                                                                   <  1:81379/150‑1 (MQ=255)
    aCCGATGCCGATGATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGcc                                                                                                                                                  <  1:4871624/150‑1 (MQ=255)
     ccgatgccgatgATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCa                                                                                                                                                 <  2:3300075/150‑1 (MQ=255)
         tgccgatgATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGTTTTGCCGCCAGCaa                                                                                                                                             <  1:2351747/150‑1 (MQ=255)
         tgccgatgATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGTTTTGCCGCCAGCaa                                                                                                                                             <  1:1279276/150‑1 (MQ=255)
         tgccgatgATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAATCCGCCAGCaa                                                                                                                                             <  2:1254847/150‑1 (MQ=255)
            cgatgATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGc                                                                                                                                          <  2:109588/150‑1 (MQ=255)
             gatgatCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCCGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCCAAACCGCCAGCAAGGcc                                                                                                                                         >  1:3660809/1‑150 (MQ=255)
             gatgatCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAAACGCCAGCAAGGcc                                                                                                                                         >  1:1062369/1‑150 (MQ=255)
             gatgatCCACTGCCCGCACTCGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGTTTTGCCGCCAGCAAggtc                                                                                                                                         <  2:2983229/150‑3 (MQ=255)
             gatgatCCACTGCCCGCACTCGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCACGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTCCTGGCGGTTTTGCCGCCAGCAAggtc                                                                                                                                         <  2:3466125/150‑3 (MQ=255)
              atgatCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGTTTTGCCGCCAGCAAGGTCg                                                                                                                                        <  1:358972/150‑1 (MQ=255)
                     aCTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGCTCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGcc                                                                                                                                 >  2:4699540/1‑150 (MQ=255)
                     aCTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGc                                                                                                                                                   <  2:5102122/132‑1 (MQ=255)
                     aCTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGc                                                                                                                                                   >  1:5102122/1‑132 (MQ=255)
                     aCTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGcc                                                                                                                                 >  2:5172368/1‑150 (MQ=255)
                         cccGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCggg                                                                                                                             >  2:4346738/1‑149 (MQ=255)
                         cccGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGt                                                                                                                             >  2:4346616/1‑150 (MQ=255)
                           cGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAACGCCGACCCGCCCGGTcg                                                                                                                           >  1:5174209/1‑150 (MQ=255)
                             cACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCCACCAGCCCCGTcgcg                                                                                                                         >  1:3694508/1‑150 (MQ=255)
                              aCTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGcga                                                                                                                        <  2:5346251/150‑1 (MQ=255)
                              aCTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGcga                                                                                                                        <  2:3583048/150‑1 (MQ=255)
                              aCTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGcga                                                                                                                        >  2:2735614/1‑150 (MQ=255)
                                     gCCGTTGGGGTTTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATTAACCGACCATCCATGGCAACGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACaa                                                                                                                 <  2:3472197/150‑1 (MQ=255)
                                     gCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCGTGCTGGCGGCCAAACCCCCCGCAAGGCCGACCAGCCCGGGCGCGACGAACaa                                                                                                                 >  1:912480/1‑150 (MQ=255)
                                      cggTTGGGTATTTCCGAACGCTGCAAACGCGACTGGCAGCGCACCAGGATGACCGCCAGAAATGACCCCACCATCATTGGCAACGGCCAGCCGACTTTGGTGGGGGAAAACCCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAAt                                                                                                                <  1:4417656/148‑1 (MQ=255)
                                         ttGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGc                                                                                                             >  1:2684953/1‑150 (MQ=255)
                                             ggATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACg                                                                                                         >  1:4233092/1‑150 (MQ=255)
                                              gATTTCCGAACGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAACGGCCAGCCGACGTTGCTGGCGGCAAACCCGCCAGAAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGa                                                                                                        <  2:2077654/150‑1 (MQ=255)
                                              gATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAAAGGCAACGa                                                                                                        >  1:604540/1‑150 (MQ=255)
                                                 ttCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCg                                                                                                     >  1:1152207/1‑150 (MQ=255)
                                                   ccGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGAt                                                                                                   >  1:2093839/1‑150 (MQ=255)
                                                    cGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATc                                                                                                  >  1:1201161/1‑150 (MQ=255)
                                                    cGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATc                                                                                                  >  2:3545165/1‑150 (MQ=255)
                                                     gAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCa                                                                                                 >  1:4507094/1‑150 (MQ=255)
                                                        aGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAAACGCCAGCAAGGCCGACCACCACGGTCGCCACCAACAATGGCAACGACCGAACAGGc                                                                                              >  1:3294335/1‑150 (MQ=255)
                                                             ccAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCgg                                                                                         >  2:3216505/1‑150 (MQ=255)
                                                             ccAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGGCGCGACGAACAATGGCCACGACCGATCAGGCATCgg                                                                                         >  1:230485/1‑150 (MQ=255)
                                                              cAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAAAGGCAACGACCGATCAGGCATCGGc                                                                                        >  1:5233280/1‑150 (MQ=255)
                                                              cAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCCACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGc                                                                                        >  1:1588627/1‑150 (MQ=255)
                                                                aCGCGTCTGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAACGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCa                                                                                      <  1:4963548/150‑1 (MQ=255)
                                                                       aGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCCGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCg                                                                               >  2:3257724/1‑150 (MQ=255)
                                                                         gCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCCGCAAGGCCGACCCGCCCGGTCGCGCCGAACAATGGCAACGACCGCTCAGGCATCGGCCCGGGCCCGgc                                                                             >  1:304215/1‑150 (MQ=255)
                                                                         gCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGgc                                                                             >  2:46401/1‑150 (MQ=255)
                                                                           aGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCCAAAACGCCCGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCCATCAGGCATCGGCCAGGGCCCGgcgc                                                                           >  1:630732/1‑150 (MQ=255)
                                                                           aGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAgg                                                                                                                                           <  2:749990/86‑1 (MQ=255)
                                                                           aGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAgg                                                                                                                                           >  1:749990/1‑86 (MQ=255)
                                                                               cACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCa                                                                       >  2:2305524/1‑150 (MQ=255)
                                                                                aCCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAg                                                                      >  2:3567852/1‑150 (MQ=255)
                                                                                     gatgatCGCCAGCAATGACCCGACCAGCCATGGCAAAGGCCAGCCGACCTGGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGGAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGc                                                                 <  2:3864852/150‑1 (MQ=255)
                                                                                     gatgatCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGc                                                                 >  1:809108/1‑150 (MQ=255)
                                                                                     gatgatCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACAAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGc                                                                 <  2:3257755/150‑1 (MQ=255)
                                                                                     gatgatCCCCAGCAATCACCCCACCACCCATGGCACCGCCCCGCCGACCTTGCTGGCGGAAAACCCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGc                                                                 <  1:3038045/150‑1 (MQ=255)
                                                                                         atCGCCAGCAATGAACCGACCATCCATGGCAACGGCCCGCCGACCTGGGGGGCGCCAAAACCGCCAGAATGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGttt                                                             <  1:3469438/150‑1 (MQ=255)
                                                                                         atCGCAAGCATTGACCCCACCATCCTTGCCAACGGCCCGCCGACCTGGCTGGCGCCAAACCCGCCAGCACGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGttt                                                             <  1:4220546/150‑1 (MQ=255)
                                                                                          tCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAAACGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCCACCACCGATCACGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTg                                                            >  1:2572315/1‑150 (MQ=255)
                                                                                           cGCCAGCAATCAACCGCCCACCCATGGCAACGCCCAGCCGCCCTGGCGGGCGGCAAACCCGCCAGCACGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTgc                                                           <  2:228932/150‑1 (MQ=255)
                                                                                             ccAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTgcgc                                                         <  2:809108/150‑1 (MQ=255)
                                                                                              cAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTTGCGGCAAAAACGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGcc                                                        >  1:129530/1‑150 (MQ=255)
                                                                                              cAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCCGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTGTGCGcc                                                        >  2:814944/1‑150 (MQ=255)
                                                                                                   aTGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATg                                                   >  2:837821/1‑150 (MQ=255)
                                                                                                   aTGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATg                                                   >  2:4449312/1‑150 (MQ=255)
                                                                                                     gAACCGACCATCCTTGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCTGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATgcg                                                 <  1:3926130/150‑1 (MQ=255)
                                                                                                     gAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATgcg                                                 >  2:4772005/1‑150 (MQ=255)
                                                                                                     gAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATgcg                                                 >  2:36669/1‑150 (MQ=255)
                                                                                                     gAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCCGTCGCGCCGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGGTTGCGCCCGATgcg                                                 >  1:233386/1‑150 (MQ=255)
                                                                                                         cGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCgcagc                                             >  1:3961182/1‑150 (MQ=255)
                                                                                                          gACCATCCTGGGCAACGGCCAGCCGCCGTTGCTGGCGGAAAAACCGCCAGCTCGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCgcagca                                            <  1:2142480/150‑1 (MQ=255)
                                                                                                             catccatGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGTGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCg                                         >  2:5001314/1‑150 (MQ=255)
                                                                                                              atccatGGCAACGGCCAGCCGACCTGGCGGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCgg                                        <  2:2780686/150‑1 (MQ=255)
                                                                                                               tccatGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGc                                       >  2:2593323/1‑150 (MQ=255)
                                                                                                               tccatGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGGCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGc                                       >  2:2166339/1‑150 (MQ=255)
                                                                                                               cccatGGCAAAGGCCAGCCGACCTGCCTGGCGGCAAACCCGCCAGCAAGGCCGCCCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGc                                       <  1:2205663/149‑1 (MQ=255)
                                                                                                                ccttGGCAACGGCCAGCCGACGGGGCGGGCGGAAACACCCCCAGCACGCCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCa                                      <  1:1859094/147‑1 (MQ=255)
                                                                                                                ccatGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCa                                      <  2:4935508/150‑1 (MQ=255)
                                                                                                                 catGGCAACGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAg                                     <  2:2699524/150‑1 (MQ=255)
                                                                                                                  atGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCCAGGCCGACCAGCCCGGTCGCGACGAAAAATGGCAACGACCGATAAGGCAACGGCCAGGGCCCCGCGCTGCAGGCTGCGTTTTCGCCAGATTCGCAGCAGCGGCAgg                                    >  1:986590/1‑150 (MQ=255)
                                                                                                                     gCAACGGCCAGCCGACCGTGCTGGCGGCAAAACCGCCAGCACGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCg                                 <  2:1755966/150‑1 (MQ=255)
                                                                                                                     gCAAAGGCCAGCCGACCTTGCTGGCGGCCAAACCCCCAGCAAGGCCGACCAGCCCCGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTTCGCCAGATGCGCAGCAGCGGCAGGGCg                                 >  1:4794203/1‑150 (MQ=255)
                                                                                                                      cAAAGGCCAGCCGACCTGGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGa                                <  1:4348311/150‑1 (MQ=255)
                                                                                                                        aaGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGc                              >  2:5264359/1‑150 (MQ=255)
                                                                                                                         aGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCa                             >  2:5428332/1‑150 (MQ=255)
                                                                                                                          ggCCACCCGACCTTGCTGGCGGCAAAACCGCCAGCACGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCAt                            <  2:1432682/150‑1 (MQ=255)
                                                                                                                            ccAGACGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGAGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTa                          >  2:5363233/1‑150 (MQ=255)
                                                                                                                               gCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGt                                                               <  1:3568629/110‑1 (MQ=255)
                                                                                                                               gCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGt                                                               >  2:3568629/1‑110 (MQ=255)
                                                                                                                               gCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCa                       <  2:5118807/150‑1 (MQ=255)
                                                                                                                                 cggccTTGCTGGCGGTTTTGCCGCCAGCAAGGTCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACt                     >  2:4255831/4‑150 (MQ=255)
                                                                                                                                   gccTTGCTGGCGGTTTTGCCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCCGGGCGAGCATTACCACTAc                   >  2:4716743/2‑150 (MQ=255)
                                                                                                                                   aCCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTAc                   <  1:2033799/150‑1 (MQ=255)
                                                                                                                                   aCCTTGCTGGCGGAAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTAc                   <  1:2033797/150‑1 (MQ=255)
                                                                                                                                     cTTGCTGGCGGTTTTGCCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGtt                                                              <  2:2191145/105‑1 (MQ=38)
                                                                                                                                          tGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCATGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCAGTACCACTACCCGCGcc            >  2:4155994/1‑150 (MQ=255)
                                                                                                                                          tGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGAGGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGcc            >  2:3967497/1‑150 (MQ=255)
                                                                                                                                            gcggcAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGCCCa          >  2:5331994/1‑150 (MQ=255)
                                                                                                                                              ggaaaaaCCGCCATCAACCCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCTCCCAGa        <  2:1762664/147‑1 (MQ=255)
                                                                                                                                                 aaaaCCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGCCCAGATGc     <  2:4455141/150‑1 (MQ=255)
                                                                                                                                                  aaaCCGCCAGAAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGCCCAGATGcc    <  1:4346616/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
CAATACCGATGCCGATGATCCACTGCCCGCACTTGCGGCCGTTGGGGATTTCCGAAAGCTGCCAACGCGTCAGGCAGCGCACCAGGATGATCGCCAGCAATGAACCGACCATCCATGGCAAAGGCCAGCCGACCTTGCTGGCGGCAAAACCGCCAGCAAGGCCGACCAGCCCGGTCGCGACGAACAATGGCAACGACCGATCAGGCATCGGCCAGGGCCCGGCGCTGCAGGCTGCGTTTGCGCCAGATGCGCAGCAGCGGCAGGGCGAGCATTACCACTACCAGCGCCCAGATGCCCA  >  NC_002947/1615586‑1615883

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑