| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,665,704 | A→T | 5.2% | L69Q (CTG→CAG) | PP_1459 ← | CBS domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,665,704 | 0 | A | T | 5.2% | 582.7 / 14.0 | 173 | L69Q (CTG→CAG) | PP_1459 | CBS domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base A (78/86); new base T (6/3); total (84/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
Only 100 of 195 total aligned reads displayed.
TCAGCAGGCTGGCACCAAGGCTCACGAACGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGCAGGCGGGCAGCCTCCACGGCAGTGAACAGTGCTGAC > NC_002947/1665555‑1665853 | tCAGCAGGCTGGCACCAAGGCTCACGAACGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCccacca < 1:1977591/150‑1 (MQ=255) agcagGCTGGCACCAAGGCTCACGAACGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACcagg < 1:3988027/150‑1 (MQ=255) ggCTGGCACCAAGGCTCACGAACGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACcaggcagg < 1:1036963/150‑1 (MQ=255) cTGGCACCAAGGCTCACGAACGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGcc > 1:3423354/1‑150 (MQ=255) tGGCACCAAGGCTCACGAACGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTACTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCa < 2:1434426/150‑1 (MQ=255) tGGCACCAAGGCTCACGAACGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTACTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCa < 2:1434677/150‑1 (MQ=255) ggCACCAAGGCTCACGAACGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAg < 2:2219068/150‑1 (MQ=255) ggCACCAAGGCTCACGAACGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAg < 2:3761582/150‑1 (MQ=255) ggCACCAAGGCTCACGAACGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAg < 2:4614877/150‑1 (MQ=255) gCACCAAGGCTCACGAACGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGc < 1:4258211/150‑1 (MQ=255) cACCAAGGCTCACGAACGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGcc < 2:3423354/150‑1 (MQ=255) cAAGGCTCACGAACGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCcca < 1:841812/150‑1 (MQ=255) aGGCTCACGAACGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCccagc > 1:2026473/1‑150 (MQ=255) tCACGAACGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCTGGCAGGCCAGCCccagcacca > 2:3603401/1‑150 (MQ=255) tCACGAACGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCccagcacca > 1:94113/1‑150 (MQ=255) cACGAACGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGTCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCccagcaccag < 2:1993447/150‑1 (MQ=255) gAACGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCACGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACcagcag > 2:3678282/1‑150 (MQ=255) gAACGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACcagcag > 1:353350/1‑150 (MQ=255) gAACGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACcagcag > 2:2142814/1‑150 (MQ=255) aaCGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCagcagc < 2:1146458/150‑1 (MQ=255) aaCGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCagcagc < 2:4853993/150‑1 (MQ=255) cTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCccagcaccag > 2:331711/1‑141 (MQ=255) tGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGccc < 1:4180028/150‑1 (MQ=255) tGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGccc > 1:3069369/1‑150 (MQ=255) gCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCa < 2:1292792/150‑1 (MQ=255) cGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAg < 1:2351032/150‑1 (MQ=255) ggTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGc < 1:3349474/150‑1 (MQ=255) gTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCt > 1:2817038/1‑150 (MQ=255) ttACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTg > 1:629389/1‑150 (MQ=255) tACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTgg < 1:1518896/150‑1 (MQ=255) gCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGgcgc > 1:2980383/1‑150 (MQ=255) gCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGgcgc > 1:721841/1‑150 (MQ=255) gggCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGcaca < 1:4530553/150‑1 (MQ=255) gggCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGcaca > 2:75552/1‑150 (MQ=255) gggCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGcaca < 1:2268133/150‑1 (MQ=255) ggCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAg < 1:2335737/150‑1 (MQ=255) ccAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCa > 2:448991/1‑150 (MQ=255) cAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCAc > 1:1784163/1‑150 (MQ=255) aGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCAcc > 2:177086/1‑150 (MQ=255) ggCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCa > 2:249144/1‑150 (MQ=255) gcgcCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCaa > 2:4473275/1‑150 (MQ=255) cgccgcGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAg < 1:4044077/150‑1 (MQ=255) gccgcGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAgg > 1:756340/1‑150 (MQ=255) cgGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTg < 1:2304098/150‑1 (MQ=255) ggCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCGGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTgg < 1:2767541/150‑1 (MQ=255) ggCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCGTGCCCAGGCTGGCGCACAGCACCAAGGCCTgg < 2:596387/150‑1 (MQ=255) aGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACcaggcagg > 1:5203321/1‑94 (MQ=255) tACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGgc > 2:4176162/1‑150 (MQ=255) tACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGgc > 2:1264711/1‑150 (MQ=255) tCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGgcagc > 1:4985914/1‑150 (MQ=255) aaCACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGa > 1:2445272/1‑150 (MQ=255) acCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCccagcacca < 1:1969919/94‑1 (MQ=255) acCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATgg > 1:1237382/1‑150 (MQ=255) acCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCCGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATgg < 2:3543610/150‑1 (MQ=255) gCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCTGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCAGGGGATGGCCgg > 2:213850/1‑149 (MQ=255) gCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGt > 1:2280620/1‑150 (MQ=255) gCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGt > 1:2537034/1‑150 (MQ=255) ggTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGTTGGCCGTCTTc < 2:5252145/150‑1 (MQ=255) ggTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTc < 2:770913/150‑1 (MQ=255) tGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGc < 2:1968619/150‑1 (MQ=255) tGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGc < 2:3754002/150‑1 (MQ=255) aGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCg < 2:5295447/150‑1 (MQ=255) gTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATg > 2:3447720/1‑134 (MQ=255) gTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATg < 1:3447720/134‑1 (MQ=255) tCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGgcgc < 2:2658950/150‑1 (MQ=255) gCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCGGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAgt > 1:3005470/1‑150 (MQ=255) ggCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGc < 1:3314551/150‑1 (MQ=255) ggCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGc < 1:4238813/150‑1 (MQ=255) tGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCAtt < 1:4354910/150‑1 (MQ=255) tGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCAtt < 2:3246869/150‑1 (MQ=255) tGCCAGCCAGAAGCCGTGCTCGCCACTCGGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCAtt < 2:3866061/150‑1 (MQ=255) ccagccagAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGa > 1:3595146/1‑150 (MQ=255) ccagccagAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGa < 1:4861689/150‑1 (MQ=255) ccagccagAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGa < 2:4372256/150‑1 (MQ=255) ccagccagAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGa < 1:2967150/150‑1 (MQ=255) cagccagAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAgtgt < 2:2984591/141‑1 (MQ=255) gccagAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCa > 2:516496/1‑143 (MQ=255) cagAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGc > 1:1439679/1‑150 (MQ=255) cagAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGc > 1:5055240/1‑150 (MQ=255) ccGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGCAGGCgg < 2:1854455/150‑1 (MQ=255) gCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGCAGGCGGGCAg > 1:4590890/1‑150 (MQ=255) cTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGCAGGCGGGCAGc > 1:4946315/1‑150 (MQ=255) tCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCCAGGCCTGGGCTGGCAGCACGGGag > 1:1281336/1‑99 (MQ=255) ccACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGCAGGCGGGCAGCCTcc > 2:3786801/1‑150 (MQ=255) cACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGCAGGCGGGCAGCCTCCa > 2:1898200/1‑150 (MQ=255) aCTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGTGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGCAGGCGGGCAGCCTCCAc < 2:4773519/150‑1 (MQ=255) ctctGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGCAGGCGGGCAGCCTCCACg < 2:2375375/150‑1 (MQ=255) ctGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGCAGGCGGGCAGCCTCCACGGc < 1:4473275/150‑1 (MQ=255) tGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGCAGGCGGGCAGCCTCCACGGCa > 1:1915249/1‑150 (MQ=255) gggcTGGCCTGCCTGGTGGGCCAGCGCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGCAGGCGGGCAGCCTCCACGGCAGt > 1:2078870/3‑150 (MQ=255) gggcTGGCCTGCCTGGTGGGCCAGCGCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGCAGGCGGGCAGCCTCCACGGCAGt > 1:1816148/3‑150 (MQ=255) gcgcTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGCAGGCGGGCAGCCTCCACGGCAGt > 2:3923991/1‑150 (MQ=255) tGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGCAGGCGGGCAGCCTCCACGGCAGTGAAc > 2:1322064/1‑150 (MQ=255) gCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGCAGGCGGGCAGCCTCCACGGCAGTGAACAg > 1:4400201/1‑150 (MQ=255) accaGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGCAGGCGGGCAGCCTCCACGGCAGTGAACAGTGCt > 1:1165443/1‑150 (MQ=255) accaGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGCAGGCGGGCAGCCTCCACGGCAGTGAACAGTGCt < 2:3580118/150‑1 (MQ=255) accaGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGCAGGCGGGCAGCCTCCACGGCAGTGAACAGTGCt < 1:3879209/150‑1 (MQ=255) ccaGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGCAGGCGGGCAGCCTCCACGGCAGTGAACAGTGCTg > 2:102256/1‑150 (MQ=255) caggcaggCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGCAGGCGGGCAGCCTCCACGGCAGTGAACAGTGcctc < 2:1612672/150‑4 (MQ=255) caggcaggCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGCAGGCGGGCAGCCTCCACGGCAGTGAACAGTGCTGa < 2:3069369/150‑1 (MQ=255) | TCAGCAGGCTGGCACCAAGGCTCACGAACGCCTGCGGGTTACGCCGGGCCAGGCGCCGCGGCAGATACTCGGCAAACACCAGCAAGGTGAGGGTCGCGGCCAGGCCTGCCAGCCAGAAGCCGTGCTCGCCACTCTGGCGCTGGCCCACCAGGCAGGCCAGCCCCAGCACCAGCAGCTTGCCCAGGCTGGCGCACAGCACCAAGGCCTGGGCTGGCAGCACGGGATGGCCGTCTTCGCCGGCGCGCAGTGTGCCATTGAGCTGCAGGCGGGCAGCCTCCACGGCAGTGAACAGTGCTGAC > NC_002947/1665555‑1665853 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |