| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,703,321 | G→A | 7.4% | intergenic (+128/‑39) | lysS → / → PP_1497 | lysine‑‑tRNA ligase/TetR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,703,321 | 0 | G | A | 7.4% | 443.8 / 16.5 | 149 | intergenic (+128/‑39) | lysS/PP_1497 | lysine‑‑tRNA ligase/TetR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (103/35); new base A (8/3); total (111/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 154 total aligned reads displayed.
GCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACAGCGTCGC > NC_002947/1703172‑1703470 | gCACTTGCGTCCGCAGGCCTTAGTGAGCTGAACGCGCCGCCTTTCGAGGCGGATTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGAAAACCCGCTCCTACAAAGGCATTGTAGGTG‑CGGG‑TTTACCCGCGAAgg < 2:1696368/150‑1 (MQ=255) aTGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAAACCCCACCGACAAAAGCCGTGTGGGGG‑CCGG‑TTTTACCCCGGAGGGGcc > 1:150126/1‑150 (MQ=255) aCGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGt > 2:4979903/1‑150 (MQ=255) gccgccTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTTAAACCCCTCCGACAAAAGCCGTGTTGGGG‑CGGG‑TTTTCCCCCGCAGGGGCCAGCACAGACGAAAAACCCCCAGGAGGGAtac > 1:3460442/1‑148 (MQ=255) gccgccTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTTAAACCCCACCTACAAAAGCCGTGTGGGGGCCGGG‑TTTA‑CCGCCTAGGGGCCAGCACGGACGAAACACCCCCCAGATGTATcc > 1:3392362/1‑150 (MQ=255) gccgccTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGTAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATcc > 2:3160243/1‑150 (MQ=255) ccgccTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTAAGTACGGGCCTCTTCGCGGGTAAACCCGCTCCAACAAAGGCCTTGTTGGAG‑CGGT‑TTTCCCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATccc < 2:5111708/150‑1 (MQ=38) gccTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTTAACCCCCGCCAAACAAAGCCCTGTATGAG‑CGGGTTTTACCCCCCCGGGGGCC‑CCACGGACGAAAAACCCCCCAGAGGTATacccc > 1:2019955/1‑150 (MQ=255) gccTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGCCCTCTTCGCGGGTAAACCCGCTCCTCCACAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATccccc < 2:2242858/150‑1 (MQ=255) ttCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGa < 2:5309311/150‑1 (MQ=255) gggggatttttCTTGCCTTAAGCTTTTTGTTGTCTGTACCGGCCTCTTGGGGGTTAAACCCGCCCATAAAAAGGCCTTTTAGGCG‑GGGT‑TTTACCCGCGAAGGCGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACAccc < 2:1115784/144‑1 (MQ=255) cTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGa < 2:3981126/150‑1 (MQ=255) ttGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAAACCGCTCCGACAAAGGCCGTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACAGACGAAACACCCCCATGAGGTATCCCCCCTGACACCCCCCAAGCCTGAc > 1:3629886/1‑150 (MQ=37) ccTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACACGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCaa < 2:521017/150‑1 (MQ=255) cTGATGCTTTTGTTTGTCAGTACCGGCCTGTTCGGGGGTAACCCCGCACCTACAAAGGCTTTGTAGGAG‑GGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAg < 1:4941108/150‑1 (MQ=255) tttATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCGCCCACCAAGGCCCGGGGGGCG‑CGGG‑GTTGCCCGCGCAGGGGCCCGCCCAGACGAAACACCCCCCAGAGGTATCCCCCCAGACACCCCCCCAGCCAGCCCCAGGcgccgc > 2:1442384/1‑150 (MQ=255) ttgtCAGTACCGGCCTCTTCGCGGGTAAAACCCCGCCGACAAAGGCCGGGGAGGAG‑CGGG‑GTTTACCGCGGAGGGGGCCGCACTGACGAAACAACCCCCTGGGGTATCCCCCCGGTCACCCCCCCTGCCGGACCCACGCGCCGCCGGCag > 1:3962518/1‑149 (MQ=255) tgtCAGTCCCGGCCTCTTCGCGGGTAACCCCGCTCCTACAAAGGCCTTGTAGGAG‑GGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATc < 1:1279045/150‑1 (MQ=255) tCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGTAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGc > 2:3010402/1‑150 (MQ=255) tCAGTACCGGCCTCTTCGCGGGTAAACCCCCGCCGACCAAGGCCGTGTAGGAG‑CGGG‑GTTACCCCCGCAGGGGCCAGCCCAGACCAAACACCCCCCAGAGGTCACCCCCCAGACCCCCCCCCTGCCGGACCAACGCCCCCCCCGCaaccc > 2:3792713/1‑146 (MQ=12) ttcccGGCCTCTTGGGGGTTAAACCCGCCCCTCCAACGGCGTTGTTGGTG‑GGGT‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCAc < 1:3973874/147‑1 (MQ=255) tACCGGCCTCTTCGCGGGTTAACCCCCTCCAAAAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCCCGAAGGGGCCAGCACTGACCAAACACCCCCATGAGGTATCCCCCCTGACCCCCGCCAAGCCTGACCAAGGCGCCGCCGGCATCGCCAcc > 2:4189504/1‑150 (MQ=38) ccTCTTCGCGGGTAAACCCCCTCCAACACCGGCCTTGTCGGAG‑CGGG‑TTTCCCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTc < 1:450063/150‑1 (MQ=255) tctTCGCGGGTAAACCCGCTCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGc > 2:5263828/1‑150 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAAGGCCTTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGGCGCCg > 2:2667147/1‑150 (MQ=255) ttCGCGGGTAAAACCGCTCCGACAAAGGCCGTGTAGGAG‑CGGG‑GTTACCCGCGAAGGGGCCAGCACTGACGAAAAACCCCCAAGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCCTCGCCACCGCCGTCGccc > 2:6137/1‑149 (MQ=255) ggTAAACCCGCTCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCg > 1:2597455/1‑150 (MQ=255) gTAAACCCGCTCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGAc < 2:1131405/63‑1 (MQ=255) gTAAACCCGCTCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGAc > 1:1131405/1‑63 (MQ=255) gTAAACCCGCTCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCg < 2:833681/128‑1 (MQ=255) gTAAACCCGCTCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGt > 2:5106414/1‑150 (MQ=255) tAAACCCGCTCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACGCCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTg > 2:984384/1‑150 (MQ=255) aaaCCCGCTCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGc > 2:3823538/1‑150 (MQ=255) aaCCCGCTCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCACGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAACGCGTGCa > 2:2835379/1‑150 (MQ=255) aCCCGCTCCTACAACGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCaa < 2:3499092/150‑1 (MQ=255) cccGCTCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCgctcggc > 1:970153/1‑144 (MQ=255) cccGCTCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAAt > 1:470550/1‑150 (MQ=255) ccGCTCCTACAAGGCCTTTGTAGGAG‑CGGG‑TTTACCCGCGATGAGGCCGGTACTGACAAATCACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATa > 2:2641103/1‑150 (MQ=25) ccGCTCCTACAAGGCCTTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCACTa > 1:4913746/1‑150 (MQ=255) ccGCTCCTACAAGGCCTTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATa > 2:3927884/1‑150 (MQ=255) ccGCTCCTACAAGGCCTTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATa > 1:912033/1‑150 (MQ=255) ccGCTCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCCCCGCCGTCGCCGAAAGCGTGCAATa > 1:2848960/1‑150 (MQ=255) ccGCTCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATa > 2:3055963/1‑150 (MQ=255) ccGCTCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGAATCCCCCGAGACACCCGCCATGCCTGACCAAGGCGCCGCCCGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATa > 2:5028318/1‑150 (MQ=255) ccGCTCCTACAAACGCCTTGTAGCAG‑CGGG‑ATTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATa < 2:3151015/150‑1 (MQ=255) gCTCCTACAAGGCCTTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATAcc > 1:5221342/1‑150 (MQ=255) gCTCCTACAAGGCCTTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATAcc > 2:444537/1‑150 (MQ=255) gCTCCTACAAGGCCTTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATAcc > 2:3986705/1‑150 (MQ=255) gCTCCTACAAGGCCTTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATAcc > 2:444835/1‑150 (MQ=255) tCCTACAAGGCCTTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCaa > 2:229980/1‑150 (MQ=255) tCCTACAAGGCCTTTGTAGGAG‑CGGG‑TTTACCCGCGAAGAGGCCGGTACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCaa > 1:1252792/1‑150 (MQ=37) tCCTACAAGGCCTTTGTAGGAG‑CGGG‑TTTACCCGCGAAGAGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCaa > 1:239938/1‑150 (MQ=255) tCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCaa > 1:2963276/1‑150 (MQ=255) cTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAgg > 1:2554983/1‑150 (MQ=255) cTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAgg > 2:5410669/1‑150 (MQ=255) cTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAgg > 1:2555138/1‑150 (MQ=255) cTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAgg > 1:1160770/1‑150 (MQ=255) tACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGc > 2:4789016/1‑150 (MQ=255) tACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGc > 2:2084568/1‑150 (MQ=255) tACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGc > 2:2923102/1‑150 (MQ=255) tACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGc > 1:1488246/1‑150 (MQ=255) cAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCaa > 2:1873687/1‑139 (MQ=255) cAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGGCGCCGCACGCGTGCAATACCAAGGCCg > 2:3630846/1‑150 (MQ=255) aaaGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGc > 2:4660411/1‑150 (MQ=255) aaaGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGc > 1:180864/1‑150 (MQ=255) aaaGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGc > 2:5298381/1‑150 (MQ=255) aaaGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGc > 1:485473/1‑150 (MQ=255) aGGCCTTGTAGGAG‑GGGT‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCaa < 1:3104232/150‑1 (MQ=255) gcctttGTAGGAG‑CGGG‑TTTACCCGCGAAGAGGCCGGTACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATc < 2:5055350/104‑1 (MQ=37) gcctttGTAGGAG‑CGGG‑TTTACCCGCGAAGAGGCCGGTACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATc > 1:5055350/5‑108 (MQ=37) tttGTAGGAG‑CGGG‑TTTACCCGCGAAGAGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCAGCCATGCCTGACCATGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACt > 2:250026/2‑150 (MQ=255) cTTGTAGGAG‑GGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACt < 1:5349726/150‑1 (MQ=255) cTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACt > 2:3084861/1‑150 (MQ=255) ttGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTg > 1:3804100/1‑150 (MQ=255) tGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGc > 2:4606581/1‑150 (MQ=255) ttcg‑CGGG‑TAAACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGc > 2:4334252/4‑150 (MQ=255) gAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGcc > 1:3183304/1‑150 (MQ=255) gAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGcc > 1:4283700/1‑150 (MQ=255) gAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGcc > 2:3239976/1‑150 (MQ=255) g‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCac > 1:3328873/1‑149 (MQ=255) g‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCaa < 2:3255711/150‑1 (MQ=255) g‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCaa > 1:3328882/1‑150 (MQ=255) g‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCa > 2:4755196/1‑150 (MQ=255) g‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCa > 2:830509/1‑150 (MQ=255) g‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCa > 1:1786138/1‑150 (MQ=255) cccGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGaa < 2:1870990/150‑1 (MQ=255) cccGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGaa < 1:3099371/150‑1 (MQ=255) ccGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAAc < 1:3823538/150‑1 (MQ=255) ccGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAAc > 1:2900343/1‑150 (MQ=255) ccGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAAc > 1:3579561/1‑150 (MQ=255) cgcgCAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACa < 2:2019955/150‑1 (MQ=255) cgcgAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACa < 1:1930689/150‑1 (MQ=255) gcgAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGAc > 1:2469493/1‑66 (MQ=255) gcgAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGAc < 2:2469493/66‑1 (MQ=255) gcgAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACAg > 2:1356739/1‑150 (MQ=255) gcgAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACAg > 1:3626788/1‑150 (MQ=255) gcgAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACAg < 1:3087358/150‑1 (MQ=255) cgAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCACGGCCGCAAGACTGCCCGCCAAGGCAGCGAACAGc < 1:3108428/150‑1 (MQ=255) gggCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACAGCGTCGc > 1:82790/1‑150 (MQ=255) gggCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACAGCGTCGc > 1:82797/1‑150 (MQ=255) | GCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCCTTGTAGGAG‑CGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACAGCGTCGC > NC_002947/1703172‑1703470 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |