| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,703,326 | A→G | 6.4% | intergenic (+133/‑34) | lysS → / → PP_1497 | lysine‑‑tRNA ligase/TetR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,703,326 | 0 | A | G | 6.4% | 479.4 / 14.3 | 159 | intergenic (+133/‑34) | lysS/PP_1497 | lysine‑‑tRNA ligase/TetR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (104/40); new base G (7/3); total (116/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.78e-01 | |||||||||||
Only 100 of 161 total aligned reads displayed.
GCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACAGCGTCGCCAGTT > NC_002947/1703184‑1703475 | gccggCCTGAGTGCGCTGACCGCGCCGCCTTGCGCGGCGGCTTTTTCGTGCCTGCAGCTTTAGGTGGTCCGGGCGGGCCCCTGCGCGGGTAAACCCGCTCCT‑CCACGGCCTTGGTGGGAGCGGG‑TTTACCCGCGAAGAGGCCGGTACTGa < 2:5328925/147‑1 (MQ=9) tGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCCTT‑GTAGGAGCGGG‑TTTAACCCCGAAGGGGCCAGCACTGACGAAACACCCCCAAGa > 2:3019297/1‑150 (MQ=255) aaCGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTAGCGGGTAAACCCGCTCCGACAAAGGCCTT‑GTAGGAGCGGG‑TTTAACCGCGAAGGGGCCAGCACAGACGAAACACACCCAAGAgg > 2:1847138/1‑150 (MQ=255) gccgccTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTTAAACCCCTCCGACAAAAGCCGT‑GTTGGGGCGGG‑TTTTCCCCCGCAGGGGCCAGCACAGACGAAAAACCCCCAGGAGGGAtac > 1:3460442/1‑148 (MQ=255) gccgccTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGTAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATcc > 2:3160243/1‑150 (MQ=255) gccTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTTAACCCCCGCCAAACAAAGCCCT‑GTATGAGCGGGTTTTACCCCCCCGGGGGCC‑CCACGGACGAAAAACCCCCCAGAGGTATacccc > 1:2019955/1‑150 (MQ=255) cTTTCGAGGCGGCTTTTTCTTGCCTTAAGCTTTTTGTTGTCAGTACCGGCCTCTTCGGGGGTAAACCCGCTCCTACAACGGCCTT‑GTTGTTGGGGT‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGt < 2:5101224/150‑1 (MQ=38) ttCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGa < 2:5309311/150‑1 (MQ=255) gggggatttttCTTGCCTTAAGCTTTTTGTTGTCTGTACCGGCCTCTTGGGGGTTAAACCCGCCCATAAAAAGGCCTT‑TTAGGCGGGGT‑TTTACCCGCGAAGGCGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACAccc < 2:1115784/144‑1 (MQ=255) cTTTTTCGTGCCCGCAGATTTATGTTGTCAGTCCCGGCCTCTGCGCGGGTAAACCCGCGCCAACAACGGCGTT‑TTCGTTGCGGT‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCAt < 2:2850219/150‑1 (MQ=255) cTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGa < 2:3981126/150‑1 (MQ=255) ttGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAAACCGCTCCGACAAAGGCCGT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACAGACGAAACACCCCCATGAGGTATCCCCCCTGACACCCCCCAAGCCTGAc > 1:3629886/1‑150 (MQ=37) cTGATGCTTTTGTTTGTCAGTACCGGCCTGTTCGGGGGTAACCCCGCACCTACAAAGGCTTT‑GTAGGAGGGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAg < 1:4941108/150‑1 (MQ=255) cTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCCGT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACGGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAg > 2:1949462/1‑150 (MQ=255) tGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCCGT‑GTAGGAGCGGG‑TTTAACCGCGGAGGGGCCCGCACTGACGAAACACCCCCATGAGGTATCCCCCGGGACACCCGCCAAGCCTGACCAAgg > 2:5032605/1‑150 (MQ=38) gttcgtCAGTGCTGGCCCCTTCGCGGGTCAACCCGCTCCTACAAGGCCGGT‑GTAGGAGGGGG‑TGTACCCGCGAAGAGGCCGGTCCGGGCAAAAAACCCCCATGAGGTATCCCCCGGGACACCCGCCATGCCGGACCAAGGCGCCGCCggg > 1:2706932/5‑149 (MQ=9) ttgtCAGTACCGGCCTCTTCGCGGGTAAAACCCCGCCGACAAAGGCCGG‑GGAGGAGCGGG‑GTTTACCGCGGAGGGGGCCGCACTGACGAAACAACCCCCTGGGGTATCCCCCCGGTCACCCCCCCTGCCGGACCCACGCGCCGCCGGCag > 1:3962518/1‑149 (MQ=255) tgtCAGTCCCGGCCTCTTCGCGGGTAACCCCGCTCCTACAAAGGCCTT‑GTAGGAGGGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATc < 1:1279045/150‑1 (MQ=255) tCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGTAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGc > 2:3010402/1‑150 (MQ=255) tCAGTACCGGCCTCTTCGCGGGTAAACCCCCGCCGACCAAGGCCGT‑GTAGGAGCGGG‑GTTACCCCCGCAGGGGCCAGCCCAGACCAAACACCCCCCAGAGGTCACCCCCCAGACCCCCCCCCTGCCGGACCAACGCCCCCCCCGCaaccc > 2:3792713/1‑146 (MQ=12) tACCGGCCTCTTCGCGGGTTAACCCCCTCCAAAAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCCCGAAGGGGCCAGCACTGACCAAACACCCCCATGAGGTATCCCCCCTGACCCCCGCCAAGCCTGACCAAGGCGCCGCCGGCATCGCCAcc > 2:4189504/1‑150 (MQ=38) ccTCTTCGCGGGTAAACCCCCTCCAACACCGGCCTT‑GTCGGAGCGGG‑TTTCCCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTc < 1:450063/150‑1 (MQ=255) tctTCGCGGGTAAACCCGCTCCTACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGc > 2:5263828/1‑150 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAAGGCCTTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGGCGCCg > 2:2667147/1‑150 (MQ=255) ttCGCGGGTAAAACCGCTCCGACAAAGGCCGT‑GTAGGAGCGGG‑GTTACCCGCGAAGGGGCCAGCACTGACGAAAAACCCCCAAGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCCTCGCCACCGCCGTCGccc > 2:6137/1‑149 (MQ=255) ggTAAACCCGCTCCTACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCg > 1:4531644/1‑150 (MQ=255) gTAAACCCGCTCCTACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGAc > 1:1131405/1‑63 (MQ=255) gTAAACCCGCTCCTACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCg > 1:833681/1‑128 (MQ=255) gTAAACCCGCTCCTACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCg < 2:833681/128‑1 (MQ=255) gTAAACCCGCTCCTACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGt > 2:5106414/1‑150 (MQ=255) tAAACCCGCTCCTACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACGCCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTg > 2:984384/1‑150 (MQ=255) aCCCGCTCCTACAACGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCaa < 2:3499092/150‑1 (MQ=255) cccGCTCCTACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCgctcggc > 1:970153/1‑144 (MQ=255) cccGCTCCTACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAAt > 2:2153878/1‑150 (MQ=255) cccGCTCCTACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAAt > 1:470550/1‑150 (MQ=255) ccGCTCCTACAAGGCCTTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCACTa > 1:4913746/1‑150 (MQ=255) ccGCTCCTACAAGGCCTTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATa > 2:3927884/1‑150 (MQ=255) ccGCTCCTACAAGGCCTTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATa > 1:340371/1‑150 (MQ=255) ccGCTCCTACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATa > 2:4424193/1‑150 (MQ=255) ccGCTCCTACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGAATCCCCCGAGACACCCGCCATGCCTGACCAAGGCGCCGCCCGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATa > 2:5028318/1‑150 (MQ=255) cGCTCCTACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTTGCCGAAAGCGTGCAATAc > 1:3244006/1‑150 (MQ=255) gCTCCTACAAGGCCTTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATAcc > 2:314794/1‑150 (MQ=255) gCTCCTACAAGGCCTTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATAcc > 2:3986705/1‑150 (MQ=255) gCTCCTACAAGGCCTTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATAcc > 1:2493841/1‑150 (MQ=255) gCTCCTACAAGGCCTTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATAcc > 1:5221342/1‑150 (MQ=255) gCTCCTACAAGGCCTTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATAcc > 2:444537/1‑150 (MQ=255) tCCTACAAGGCCTTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCaa > 2:229980/1‑150 (MQ=255) tCCTACAAGGCCTTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCaa > 1:2921136/1‑150 (MQ=255) tCCTACAAGGCCTTT‑GTAGGAGCGGG‑TTTACCCGCGAAGAGGCCGGTACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCaa > 1:1252792/1‑150 (MQ=37) tCCTACAAGGCCTTT‑GTAGGAGCGGG‑TTTACCCGCGAAGAGGCCGGTACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCaa < 2:1252792/150‑1 (MQ=37) cTACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAgg > 1:2555138/1‑150 (MQ=255) cTACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAgg > 1:2555022/1‑150 (MQ=255) cTACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAgg > 1:1160770/1‑150 (MQ=255) tACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGc > 2:4789016/1‑150 (MQ=255) tACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGc > 1:1488246/1‑150 (MQ=255) tACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGc > 2:2084568/1‑150 (MQ=255) cAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGGCGCCGCACGCGTGCAATACCAAGGCCg > 2:3630846/1‑150 (MQ=255) aaaGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGc > 2:4660411/1‑150 (MQ=255) aaaGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGc > 2:4660431/1‑150 (MQ=255) aaaGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGc > 2:5298136/1‑150 (MQ=255) aaaGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGc > 1:180864/1‑150 (MQ=255) aGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCaa < 1:2153878/150‑1 (MQ=255) gccttt‑GTAGGAGCGGG‑TTTACCCGCGAAGAGGCCGGTACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATc > 1:5055350/5‑108 (MQ=37) cTT‑GTAGGAGGGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACt < 1:5349726/150‑1 (MQ=255) cTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACt > 2:3084861/1‑150 (MQ=255) tt‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTg > 1:3804100/1‑150 (MQ=255) gAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGcc > 2:3239976/1‑150 (MQ=255) gAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGcc > 2:5159873/1‑150 (MQ=255) gAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGcc > 1:4256799/1‑150 (MQ=255) gCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCaa < 2:3255711/150‑1 (MQ=255) gCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCaa > 2:2728604/1‑150 (MQ=255) gCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCaa > 1:3328882/1‑150 (MQ=255) ggg‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAgg < 1:4893756/150‑1 (MQ=255) g‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCa > 2:830509/1‑150 (MQ=255) g‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCa > 2:4755196/1‑150 (MQ=255) g‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCa > 1:1786138/1‑150 (MQ=255) g‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGGCTCCCCCGTGACACACGACATGCCTGACCACGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAAGACCACGGCCGCAAGACTGCCCGCCAAGGcc > 2:2639898/1‑149 (MQ=255) cccGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGaa < 1:3099371/150‑1 (MQ=255) cccGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGaa < 2:1870990/150‑1 (MQ=255) ccGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAAc < 1:3823538/150‑1 (MQ=255) ccGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAAc > 1:3579561/1‑150 (MQ=255) ccGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAAc > 2:3835663/1‑150 (MQ=255) ccGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAAc > 1:2900343/1‑150 (MQ=255) ccGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATAGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAAc > 2:4551857/1‑150 (MQ=255) cgcgAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACa < 1:1930689/150‑1 (MQ=255) gcgAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGAc < 2:2469493/66‑1 (MQ=255) gcgAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGAc > 1:2469493/1‑66 (MQ=255) gcgAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACAg > 1:3626788/1‑150 (MQ=255) gcgAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACAg < 1:3087358/150‑1 (MQ=255) gcgAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACAg > 2:1356739/1‑150 (MQ=255) cgAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCACGGCCGCAAGACTGCCCGCCAAGGCAGCGAACAGc < 1:3108428/150‑1 (MQ=255) gggCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATTGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACAGCGTCGc < 1:31060/150‑1 (MQ=255) gggCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACAGCGTCGc > 1:82797/1‑150 (MQ=255) gggCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACAGCGTCGc < 1:3359581/150‑1 (MQ=255) ggCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCaa > 2:4976981/1‑62 (MQ=255) gCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACAGCGTCGCCa > 1:806969/1‑150 (MQ=255) gCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACAGCGTCGCCa < 1:3034229/150‑1 (MQ=255) cAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACAGCGTCGCCAGt > 1:949611/1‑150 (MQ=255) aGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACTGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACAGCGTCGCCAGtt < 1:4020534/150‑1 (MQ=255) aGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACAGCGTCGCCAGtt < 1:4998854/150‑1 (MQ=255) | GCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCCTT‑GTAGGAGCGGG‑TTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGACTGCCCGCCAAGGCAGCGAACAGCGTCGCCAGTT > NC_002947/1703184‑1703475 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |