| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,786,066 | T→A | 8.9% | intergenic (+40/‑146) | rpsB → / → tsf | 30S ribosomal protein S2/elongation factor Ts |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,786,066 | 0 | T | A | 8.9% | 487.5 / 23.7 | 154 | intergenic (+40/‑146) | rpsB/tsf | 30S ribosomal protein S2/elongation factor Ts |
| Reads supporting (aligned to +/- strand): ref base T (74/66); new base A (6/7); total (81/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 158 total aligned reads displayed.
TCGAGCTGTACATGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCAAGAGGATTTTGAAATGG > NC_002947/1785917‑1786215 | tCGAGCTGTACATGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCttt < 1:3977271/150‑1 (MQ=255) gAGCTGTACATGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGc > 1:3233114/1‑150 (MQ=255) aGCTGTACATGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGcc < 1:923079/150‑1 (MQ=255) gTACATGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCt < 2:2757108/150‑1 (MQ=255) tACATGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCtt > 2:357907/1‑150 (MQ=255) cctGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTGGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCtttt < 2:3425008/148‑1 (MQ=255) aTGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCttttt < 1:1384926/150‑1 (MQ=255) aTGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCttttt > 1:2386907/1‑150 (MQ=255) aTGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCAAAGCCCCCttttt < 2:4398036/150‑1 (MQ=255) aTGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTGGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCGCCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCttttt < 2:1571703/150‑1 (MQ=255) tGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTg > 1:4910582/1‑150 (MQ=255) gACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGc < 2:574370/150‑1 (MQ=255) cTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCAAAGCCCCCTTTTTGcgt < 1:2980889/150‑3 (MQ=255) ttCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCAc < 2:5026120/150‑1 (MQ=255) ttCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTGTTTGCCAc > 2:4393300/1‑150 (MQ=255) tCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCAcc > 2:3634668/1‑150 (MQ=255) tCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCAcc > 1:2790155/1‑150 (MQ=255) cGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGATGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGATTAATAGGCGCTAGCGTCTACTTGGCACGCAAAACGGGGGCAAAGCCCCCTTTTTGcgtgcc < 1:469117/150‑6 (MQ=255) cGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGGTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCt < 1:4202687/150‑1 (MQ=255) tGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATc > 1:2647809/1‑150 (MQ=255) tGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATc > 2:668718/1‑150 (MQ=255) gCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCttttt < 1:4330825/132‑1 (MQ=255) gCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCttttt > 2:4330825/1‑132 (MQ=255) cAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCctgct < 1:4689252/150‑1 (MQ=255) aGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCctgctg > 2:4248626/1‑150 (MQ=255) aTCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTCGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAg > 2:1494902/1‑150 (MQ=255) ccGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCa > 1:3894342/1‑150 (MQ=255) gcgGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGTCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATc < 1:1364382/150‑1 (MQ=255) ggCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGCCAGCATCgg < 2:5297719/150‑1 (MQ=255) gCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGc < 2:4526374/150‑1 (MQ=255) cGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGccc < 2:4270462/150‑1 (MQ=255) cGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGccc < 1:2609429/150‑1 (MQ=255) aacaacGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGc > 2:1012909/1‑150 (MQ=255) aacaacGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGc > 2:4041034/1‑150 (MQ=255) aacGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGcatc > 1:1755620/1‑150 (MQ=255) gTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATg < 2:13326/150‑1 (MQ=255) ttGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATgg < 1:2020279/150‑1 (MQ=255) gtGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATgg < 1:317631/149‑1 (MQ=255) gCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGc < 1:5072203/150‑1 (MQ=255) cggcggCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCct < 1:2748838/150‑1 (MQ=255) ggcggcACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCctg < 2:5069274/150‑1 (MQ=255) gcggcACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCctgc > 1:831138/1‑150 (MQ=255) gcggcACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCctgc > 1:830918/1‑150 (MQ=255) aCCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCtgaaa > 2:2921541/1‑150 (MQ=255) aCCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCtgaaa < 1:1260940/150‑1 (MQ=255) gAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCtgaaatga > 1:2202402/1‑150 (MQ=255) gTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGaaaa < 2:1784865/150‑1 (MQ=255) tACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAg < 2:5139160/150‑1 (MQ=255) aCGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGc < 1:4041034/150‑1 (MQ=255) aagaagCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGAttt < 2:979160/150‑1 (MQ=255) aagaagCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGAttt < 2:1545624/150‑1 (MQ=255) aagCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCa > 1:3359744/1‑150 (MQ=255) gCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCtt > 1:1643264/1‑83 (MQ=255) gCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCtt < 2:1643264/83‑1 (MQ=255) ggCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAAt > 1:209552/1‑150 (MQ=255) gCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAAtt > 2:4228085/1‑150 (MQ=255) tGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGa > 2:2162547/1‑150 (MQ=255) tGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGa > 1:3179483/1‑150 (MQ=255) gCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGaa > 1:9445/1‑150 (MQ=255) aCCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACg > 1:1655026/1‑150 (MQ=255) ctgctgAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGt < 1:5005040/150‑1 (MQ=255) gctgAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGa < 2:2202402/150‑1 (MQ=255) tgAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGAtt > 2:2119560/1‑150 (MQ=255) aTAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCct > 1:252961/1‑68 (MQ=255) aTAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACggg > 2:2709228/1‑150 (MQ=255) aTAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACggg < 2:1351945/150‑1 (MQ=255) aTAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACggg > 1:737319/1‑150 (MQ=255) tAGGCGCTAGCGTCTACTTGGCACGCAAACAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGt < 2:5312436/150‑1 (MQ=255) tAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGt > 1:2932674/1‑150 (MQ=255) aGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTg < 1:2793866/150‑1 (MQ=255) ggCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTgg > 2:626894/1‑150 (MQ=255) gcTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAAt > 2:2890015/1‑150 (MQ=255) aGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGt < 2:4622837/150‑1 (MQ=255) gCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGtt < 1:4486062/150‑1 (MQ=255) cTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAAc < 1:5053804/150‑1 (MQ=255) ttGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACt > 1:4367614/1‑150 (MQ=255) ttGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCAGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAAAGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACt > 2:4737598/1‑150 (MQ=255) gCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTc > 1:5380338/1‑150 (MQ=255) aCGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCa > 2:3775868/1‑150 (MQ=255) aCGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCa > 1:10728/1‑150 (MQ=255) gCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAAtt > 1:4835574/1‑105 (MQ=255) gCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAAtt < 2:4835574/105‑1 (MQ=255) cAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCAaga < 1:5218716/150‑1 (MQ=255) cAAAAAGGGGGCTTTACCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACCGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCAaga < 2:2085599/150‑1 (MQ=255) aaaaaGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCAagag > 2:4147328/1‑150 (MQ=255) aaaaaGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCAagag > 1:2259624/1‑150 (MQ=255) aaaaaGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCAagag > 1:5209440/1‑150 (MQ=255) aaaaaGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCAagag > 2:2239635/1‑150 (MQ=255) aaaaaGGGGGCAAAGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGAtt < 1:2427566/94‑1 (MQ=255) aaaaaGGGGGCAAAGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGAtt > 2:2427566/1‑94 (MQ=255) aaaaaGGGGGCAAAGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAAtt < 1:3341288/103‑1 (MQ=255) aaaaaGGGGGCAAAGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAAtt > 2:3341288/1‑103 (MQ=255) aaaaaGGGGGCAAAGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCAagag > 2:1487537/1‑150 (MQ=255) aaaaaGGGGGCAAAGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCAaga < 1:5372937/149‑1 (MQ=255) aaaaGGGGGCAAAGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCAAGAgg > 2:4882924/1‑150 (MQ=255) gggCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCAAGAGGATTTTg < 2:2386907/150‑1 (MQ=255) gggCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCAAGAGGATTTTg > 2:2662609/1‑150 (MQ=255) cTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCAAGAGGATTTTGaaa < 2:5380338/150‑1 (MQ=255) tttGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGACTGGTTGAAAAACTTTCCAGGAGGAGTTTGAAAt > 2:3282319/1‑150 (MQ=255) tGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGACTTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCAAGAGGATTTTGAAATgg < 2:1755620/150‑1 (MQ=255) | TCGAGCTGTACATGACTTCGATGGCTGACGCAGTCATCCGCGGCCGCAACAACGTTGCCGGCGGCACCGAAGTTTACGCTGAAGAAGCGGCTGCACCTGCTGCTGAGTAATAGGCGCTAGCGTCTACTTGGCACGCAAAAAGGGGGCTTTGCCCCCTTTTTGCCACCTTGAAATCCTGCTGTCAGCATCGGCCCCGCATCATGGGCCTGCTGAAATGAAAACAGCGGATTTGCAGAATTGAACGCCCGTGATTGACGGGTGGAATGGTTGAAAAACTTTCCAAGAGGATTTTGAAATGG > NC_002947/1785917‑1786215 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |