| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,822,230 | G→T | 7.7% | intergenic (+30/+28) | PP_mr22 → / ← fdxA | PrrB_RsmZ ncRNA/ferredoxin 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,822,230 | 0 | G | T | 7.7% | 585.6 / 28.3 | 181 | intergenic (+30/+28) | PP_mr22/fdxA | PrrB_RsmZ ncRNA/ferredoxin 1 |
| Reads supporting (aligned to +/- strand): ref base G (90/76); new base T (7/7); total (98/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.87e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 | |||||||||||
Only 100 of 186 total aligned reads displayed.
GACATGCACAGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCGATG > NC_002947/1822081‑1822378 | cATGCACAGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGaa < 2:580529/150‑1 (MQ=255) aTGCACAGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAg > 2:4861372/1‑150 (MQ=255) acaGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGcc > 1:3232077/1‑150 (MQ=255) caGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCt > 1:4342228/1‑150 (MQ=255) caGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCt > 2:1751746/1‑150 (MQ=255) aGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGccat > 2:3556800/1‑148 (MQ=255) ggCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCttt < 1:2772000/150‑1 (MQ=255) tttCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCTTCGGGCCtttttt < 2:4264414/150‑2 (MQ=255) tttCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCTTCGGGCCtttttt < 1:2764204/150‑2 (MQ=255) tttCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAgg < 1:3641545/141‑1 (MQ=255) tttCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTc < 2:742894/150‑1 (MQ=255) tttCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTc > 1:742894/1‑150 (MQ=255) tttCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTc < 1:3907867/150‑1 (MQ=255) tttCAGGATGAAGGCCAGGGACAGCGCACGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGACGGGCCttttt < 2:3806798/150‑1 (MQ=255) ttCAGGATGAAGGCCATGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCTTCGGGCCttttttg < 1:2660840/150‑3 (MQ=255) ttCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAGAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCTTCGGGCCtttttt < 2:4005566/150‑2 (MQ=255) aGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGt < 2:4332690/150‑1 (MQ=255) tGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTgg < 2:1394601/150‑1 (MQ=255) aGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGgcg > 1:3688313/1‑150 (MQ=255) aGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGAGCGCtgat < 2:2010587/150‑4 (MQ=255) gggACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCa < 1:3958482/150‑1 (MQ=255) gggACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCa < 1:3506773/150‑1 (MQ=255) gggACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCa < 2:4411915/150‑1 (MQ=255) aTCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCt > 2:1337974/1‑150 (MQ=255) tCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAgg < 2:1446523/118‑1 (MQ=255) tCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAgg < 2:1446373/118‑1 (MQ=255) tCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAgg > 1:1446523/1‑118 (MQ=255) cGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTcc > 2:2370899/1‑150 (MQ=255) aagaagCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTcagac < 1:2817299/150‑5 (MQ=255) gCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGc > 2:3873091/1‑150 (MQ=255) ggtttCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCGGTAGGACAACAAAAAAGGCCCGAAGGGCCTTTGTCGCGTCTGGGCGCTCTCAGCGCTCCAGGTCGGCaa > 2:3405699/3‑150 (MQ=255) gATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCaa > 1:4958076/1‑150 (MQ=255) tttCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCTTCGGGCCttttttgttt > 1:1863739/1‑113 (MQ=255) tttCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCTTCGGGCCttttttgttt < 2:1863774/118‑6 (MQ=255) tcatcaGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAATTTGTGGGCGGGTCAAACCGCGGC‑TTTTTTTGCGGGTAGGAAAACAAAATTGGCCCGTAGGGCCTTTTTCGCGTCTGGGCGCTATCAGGGCTCCTGGTCGGCAATCtt > 2:2892706/1‑150 (MQ=255) atcaGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGc > 1:740515/1‑150 (MQ=255) atcaGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGc > 1:4954868/1‑150 (MQ=255) tcaGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGcc < 1:818631/150‑1 (MQ=255) tcaGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGcc < 2:3412236/150‑1 (MQ=255) ggATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAgg > 1:4698761/1‑150 (MQ=255) ggATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAgg > 2:2942282/1‑150 (MQ=255) tgatgTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGCCGGCAATCTTGCCAGGCtt > 2:2190725/1‑150 (MQ=255) tgTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGcc > 1:3323234/1‑150 (MQ=255) tttGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCAt > 2:3915852/1‑150 (MQ=255) gggACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATccc < 1:424520/150‑1 (MQ=255) gggACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGAGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATccc > 1:2503523/1‑150 (MQ=255) aCAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCAtt < 1:2546157/150‑1 (MQ=255) aCAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCAtt < 1:2546169/150‑1 (MQ=255) cAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAACAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCAttc < 2:3622710/150‑1 (MQ=255) cAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCa < 2:1525258/150‑1 (MQ=255) cAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCa < 1:2128833/150‑1 (MQ=255) gggACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGc > 1:5102148/1‑150 (MQ=255) cTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTcc < 2:3232077/150‑1 (MQ=255) cTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTcc < 1:4610562/150‑1 (MQ=255) cTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTcc < 1:609856/150‑1 (MQ=255) aCGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCgg < 1:4327825/150‑1 (MQ=255) gg‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCa > 2:1006030/1‑150 (MQ=255) aaaaaaaTGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCtt > 1:555277/1‑122 (MQ=255) aaaaaaaTGTGGGCGGGTCAAACCGCCCC‑TTATTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCTGCGCTCCAGGTCGGCAATCTTGCCAGGCtt < 2:555277/122‑1 (MQ=255) aaaaaTGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGc < 2:4474228/150‑1 (MQ=255) aaaaTGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCg > 1:3201720/1‑150 (MQ=255) aaaTGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAATGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGt > 2:4669553/1‑150 (MQ=255) aaaTGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGt > 2:4152603/1‑150 (MQ=255) aaTGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTc < 2:4902165/150‑1 (MQ=255) aaTGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTc < 1:1206052/150‑1 (MQ=255) gtgGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCtt > 2:4091874/1‑150 (MQ=255) gggCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTAc < 2:568459/150‑1 (MQ=255) ggTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCTCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGc < 1:5339500/147‑1 (MQ=255) tCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGt < 1:3683092/150‑1 (MQ=255) aaaCCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGTGTCCGGCAGGGCGTCCTTACGCTCGGTGa > 1:858616/1‑150 (MQ=255) aCCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGata > 1:5156138/1‑150 (MQ=255) aCCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGata > 1:408313/1‑150 (MQ=255) cccc‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAg < 1:3532070/150‑1 (MQ=255) ccc‑TTTTTTTGCCCGTAGGAAAACAAATAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATATTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAgg > 2:5099602/1‑150 (MQ=255) tttttttGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCa > 1:360412/1‑150 (MQ=255) ttttttGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAg > 1:428126/1‑150 (MQ=255) ttttGCCCGTAGGAAAACAAAACAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCAGTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGAt < 1:2002260/150‑1 (MQ=255) ccGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGc < 1:1065853/150‑1 (MQ=255) ccGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGc > 1:5169624/1‑150 (MQ=255) ccGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGc < 2:3728346/150‑1 (MQ=255) ccGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGAGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGc < 2:5103086/150‑1 (MQ=255) ccGTAGGAAAACAAAAAACCCCCGAAGGGCCTTTTTCGCGTCTCGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGc < 2:4537479/150‑1 (MQ=255) gTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCa < 1:1751746/150‑1 (MQ=255) tAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAg > 1:1762477/1‑150 (MQ=255) ggAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGTCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCt > 1:1207505/1‑150 (MQ=255) gAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTc > 1:1086440/1‑150 (MQ=255) gAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTc > 1:1382252/1‑150 (MQ=255) cgaaaaaGGCCCTTCGGGCCTTTTTTGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGt > 1:4909101/3‑150 (MQ=255) aaaaaaGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGtt > 2:405549/1‑150 (MQ=255) aaaaaGGCCCTTCGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTc > 1:4922123/1‑150 (MQ=255) aaaaGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCTAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCa > 1:453028/1‑150 (MQ=255) aaaaGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCa < 1:1735384/150‑1 (MQ=255) aaaaGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCa > 2:3102914/1‑150 (MQ=255) aaaGGCCCTTCGGGCCTTTTTTGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAg > 1:2353722/1‑150 (MQ=255) aaaGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAg > 2:4328856/1‑150 (MQ=255) ccGAAGGGCCTTGTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCGAt > 2:27074/1‑150 (MQ=255) cGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCGATg > 2:5319544/1‑150 (MQ=255) cGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCGATg > 2:1846614/1‑150 (MQ=255) gAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCa < 1:3474907/77‑1 (MQ=255) gAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGata > 2:2565061/1‑110 (MQ=255) | GACATGCACAGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCGATG > NC_002947/1822081‑1822378 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |