| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,822,231 | A→T | 7.8% | intergenic (+31/+27) | PP_mr22 → / ← fdxA | PrrB_RsmZ ncRNA/ferredoxin 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,822,231 | 0 | A | T | 7.8% | 579.4 / 25.5 | 184 | intergenic (+31/+27) | PP_mr22/fdxA | PrrB_RsmZ ncRNA/ferredoxin 1 |
| Reads supporting (aligned to +/- strand): ref base A (92/77); new base T (8/7); total (100/84) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 188 total aligned reads displayed.
CATGCACAGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCGATGAA > NC_002947/1822083‑1822380 | cATGCACAGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGaa < 2:580529/150‑1 (MQ=255) aTGCACAGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAg > 2:4861372/1‑150 (MQ=255) aGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGccat > 2:3556800/1‑148 (MQ=255) aGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCtt > 1:4208844/1‑150 (MQ=255) tttCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCTTCGGGCCtttttt < 1:4487962/150‑2 (MQ=255) tttCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCTTCGGGCCtttttt < 1:2764204/150‑2 (MQ=255) tttCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAgg > 2:3641545/1‑141 (MQ=255) tttCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAgg < 1:3641545/141‑1 (MQ=255) tttCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTc < 2:742894/150‑1 (MQ=255) ttCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAGAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCTTCGGGCCtttttt < 2:4005566/150‑2 (MQ=255) aGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGt < 2:4332690/150‑1 (MQ=255) gATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCt > 1:4872961/1‑150 (MQ=255) tGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTgg < 2:4208844/150‑1 (MQ=255) aaGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGgc < 1:677412/150‑1 (MQ=255) ggCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGgcgc > 1:281170/1‑150 (MQ=255) ccAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTa > 2:2766318/1‑150 (MQ=255) gggACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCa < 2:4411915/150‑1 (MQ=255) gggACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCa < 1:3506464/150‑1 (MQ=255) tCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAgg < 2:1446523/118‑1 (MQ=255) tCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAgg > 1:1446523/1‑118 (MQ=255) cGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTcc > 2:2370899/1‑150 (MQ=255) gCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGc > 2:3872961/1‑150 (MQ=255) gCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGc > 2:3787212/1‑150 (MQ=255) ggtttCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCGGTAGGACAACAAAAAAGGCCCGAAGGGCCTTTGTCGCGTCTGGGCGCTCTCAGCGCTCCAGGTCGGCaa > 2:3405699/3‑150 (MQ=255) gATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTATTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCaa > 2:1368328/1‑150 (MQ=255) tttCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCTTCGGGCCttttttgttt > 1:1863739/1‑113 (MQ=255) tttCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCTTCGGGCCttttttgttt < 2:1863739/118‑6 (MQ=255) tcatcaGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCtt > 2:432571/1‑150 (MQ=255) atcaGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGc > 1:740515/1‑150 (MQ=255) atcaGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGc > 1:4954868/1‑150 (MQ=255) tcaGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGcc < 2:3412236/150‑1 (MQ=255) tcaGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGcc > 1:5141277/1‑150 (MQ=255) gatgatGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCACCAGGTCGGCAATCTTGCCAGGc > 2:1432160/1‑150 (MQ=255) tgTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGcc > 1:745286/1‑150 (MQ=255) tttGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCAt > 2:3915852/1‑150 (MQ=255) tttGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCAt > 1:3760021/1‑150 (MQ=255) ttGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATc > 1:3926289/1‑150 (MQ=255) ttGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATc < 1:501451/150‑1 (MQ=255) gggACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATccc < 1:424520/150‑1 (MQ=255) gggACAAGCAGGGACTACGGAAAAAAATGTGGGCGAGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATccc > 1:2503523/1‑150 (MQ=255) aCAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCAtt < 1:2546157/150‑1 (MQ=255) cAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAACAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCAttc < 2:3622710/150‑1 (MQ=255) gCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCAttcttc > 1:4056269/1‑150 (MQ=255) cAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAACAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCa < 2:2644950/150‑1 (MQ=255) cAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCa < 1:2128833/150‑1 (MQ=255) tACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCg > 1:1817072/1‑150 (MQ=255) tACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCg > 2:1153515/1‑150 (MQ=255) aCGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCgg < 1:4327825/150‑1 (MQ=255) cGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGc > 1:332514/1‑150 (MQ=255) aaaaaaaTGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAgg < 1:5374440/150‑1 (MQ=255) aaaaaaaTGTGGGCGGGTCAAACCGCCCC‑TTATTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCTGCGCTCCAGGTCGGCAATCTTGCCAGGCtt < 2:555277/122‑1 (MQ=255) aaaaaaaGGGGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAgg < 1:4603058/150‑1 (MQ=255) aaaaaTGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGc < 2:4474228/150‑1 (MQ=255) aaaaTGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCg > 1:3202065/1‑150 (MQ=255) aaaTGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAATGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGt > 2:4669553/1‑150 (MQ=255) aaaTGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGt > 2:4152603/1‑150 (MQ=255) aaTGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTc < 1:1206052/150‑1 (MQ=255) gtgGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCtt > 2:4091874/1‑150 (MQ=255) gggCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTAc < 2:568459/150‑1 (MQ=255) gggCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTAc > 1:573134/1‑150 (MQ=255) tCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGt < 1:3683092/150‑1 (MQ=255) tCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGt < 2:1817072/150‑1 (MQ=255) aaaCCGCCCC‑TTTTTTTTCCCGTAGGAAAACAAAAAAGGCCCCAATGGCCTTTTTAGCGTCTGGGCGCAAACAGCGCTACAGGTCCGCAAAGGTTCCAGGCGTTCCAAACCAATAATCAGCCTACGGCAGGGCCTGCGTACGCACgggta > 2:2072398/1‑147 (MQ=255) aCCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGata < 1:901565/150‑1 (MQ=255) aCCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTATTGGCGCAATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCACATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGata > 1:5156333/1‑150 (MQ=255) cccc‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAg < 1:2766318/150‑1 (MQ=255) cccc‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAg < 1:3532054/150‑1 (MQ=255) ccc‑TTTTTTTGCCCGTAGGAAAACAAATAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATATTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAgg > 2:5099602/1‑150 (MQ=255) tttttttGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCa > 1:360412/1‑150 (MQ=255) ttttttGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAg > 1:428126/1‑150 (MQ=255) ttttGCCCGTAGGAAAACAAAACAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCAGTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGAt < 1:2002260/150‑1 (MQ=255) ccGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGc < 1:1065853/150‑1 (MQ=255) ccGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGAGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGc < 2:5103086/150‑1 (MQ=255) ccGTAGGAAAACAAAAAACCCCCGAAGGGCCTTTTTCGCGTCTCGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGc < 2:4537479/150‑1 (MQ=255) gTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCa < 2:4890947/150‑1 (MQ=255) gTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCa < 1:1751746/150‑1 (MQ=255) ggAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGTCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCt > 1:1207505/1‑150 (MQ=255) gAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTc > 1:1086440/1‑150 (MQ=255) gAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTc > 1:1382252/1‑150 (MQ=255) gcAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCg > 2:2993762/2‑150 (MQ=255) aaaaaaGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGtt > 2:405549/1‑150 (MQ=255) aaaaaGGCCCTTCGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTc > 1:4922123/1‑150 (MQ=255) aaaaaGGCCCTTCGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTc > 1:4922122/1‑150 (MQ=255) aaaaaGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTc < 1:3556800/150‑1 (MQ=255) aaaaaGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTc < 2:1470686/150‑1 (MQ=255) aaaaGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCa < 1:1735384/150‑1 (MQ=255) aaaaGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCa > 2:3104578/1‑150 (MQ=255) aaaGGCCCTTCGGGCCTTTTTTGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATCTTAGGCCAGATTTCCGCCAGCTCGGCGTTctg > 2:2910561/1‑148 (MQ=255) aaaGGCCCTTCGGGCCTTTTTTGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAg > 1:2353722/1‑150 (MQ=255) aaaGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAg > 1:2927212/1‑150 (MQ=255) aaaGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAg < 2:1907318/150‑1 (MQ=255) aGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCt < 1:4614224/150‑1 (MQ=255) gCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCg > 1:529786/1‑150 (MQ=255) cccGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCGa > 2:1718302/1‑150 (MQ=255) ccGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCGAt > 1:840669/1‑150 (MQ=255) cGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCGATg > 2:5319544/1‑150 (MQ=255) gAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGata > 2:2565061/1‑110 (MQ=255) gAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGata < 1:2565061/110‑1 (MQ=255) aaGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCGATGaa < 1:3873091/150‑1 (MQ=255) aaGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCGATGaa < 1:3234309/150‑1 (MQ=255) | CATGCACAGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCC‑TTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCGATGAA > NC_002947/1822083‑1822380 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |