| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,879,936 | T→G | 5.4% | intergenic (+78/+58) | PP_1686 → / ← PP_1687 | glutathione peroxidase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,879,936 | 0 | T | G | 5.4% | 673.9 / 20.8 | 203 | intergenic (+78/+58) | PP_1686/PP_1687 | glutathione peroxidase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (90/102); new base G (6/5); total (96/107) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.83e-01 | |||||||||||
Only 100 of 210 total aligned reads displayed.
TCCAGCCTGACCAAACCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAATGCCACCGGCATCGCCAACTGAT > NC_002947/1879787‑1880085 | tcCAGCCTGACCAAACCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGt > 2:1587836/1‑150 (MQ=255) cAGCCTGACCAAACCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTGTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTtc > 2:4869236/1‑150 (MQ=255) aGCCTGACCAAACCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTtct > 2:3443218/1‑150 (MQ=255) gACCAAACCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGa < 2:4194345/150‑1 (MQ=255) ccAAACCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAg < 1:3488839/150‑1 (MQ=255) cAAACCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGt > 2:750940/1‑150 (MQ=255) aaaCCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGtt > 1:3645596/1‑150 (MQ=255) aaCCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCCGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGCTTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTg > 1:4829133/1‑150 (MQ=255) aaCCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTg > 1:40853/1‑150 (MQ=255) aaCCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTg < 2:248204/150‑1 (MQ=255) ccGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCg < 2:546451/150‑1 (MQ=255) ccGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCg < 1:311672/150‑1 (MQ=255) cGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCgg < 1:4542180/150‑1 (MQ=255) gatgatCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGga > 2:3255224/1‑150 (MQ=255) tgatCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGgatc < 1:1173516/150‑1 (MQ=255) tgatCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGgatc > 1:241332/1‑150 (MQ=255) atCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGgatcaa < 1:5422003/150‑1 (MQ=255) tCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGgatcaag > 1:3441973/1‑150 (MQ=255) cccGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGgatcaaga < 2:1088359/150‑1 (MQ=255) cccGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGgatcaaga > 1:1088359/1‑150 (MQ=255) cccGCGTTCCGCGCTGCTATCGAAAAGGCCAGTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGgatcaaga < 2:4722334/150‑1 (MQ=255) ccGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGATGCAGTTCAGGCGACGCAGATTGCGACTTCATTAGGACGTTCTCCTGAAGTTGCGGgatcaagat > 1:2802123/1‑150 (MQ=255) gcgTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGgatcaagatca < 2:1242942/150‑1 (MQ=255) gcgTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGgatcaagatca < 2:3689328/150‑1 (MQ=255) gcgTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGgatcaagatca < 2:804925/150‑1 (MQ=255) cgcgCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGcaca < 2:4253032/150‑1 (MQ=255) gcgcTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAg > 1:4193212/1‑150 (MQ=255) ctgctATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGaa < 2:820084/150‑1 (MQ=255) tgctATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAg > 1:2245788/1‑150 (MQ=255) ctATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGtg < 1:1946273/150‑1 (MQ=255) tATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCATGCACAGGAAGtgg < 2:2121709/150‑1 (MQ=255) tATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGtgg > 2:4400985/1‑150 (MQ=255) tATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGtgg < 1:1862112/150‑1 (MQ=255) tATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGAGCAAGATCACGCACAGGACGtgg > 2:4214916/1‑150 (MQ=255) tATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCATGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGtgg > 2:1406796/1‑150 (MQ=255) aTCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGtggc > 1:692074/1‑150 (MQ=255) tCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGtggct > 2:4045232/1‑150 (MQ=255) gAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGt > 1:1911276/1‑105 (MQ=255) gAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGt < 2:1911276/105‑1 (MQ=255) gAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGtggcttg > 2:2532155/1‑148 (MQ=255) gCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCgg < 2:4283241/150‑1 (MQ=255) cATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGATGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCgggg > 1:3600/1‑150 (MQ=255) aTTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGc < 1:2925956/150‑1 (MQ=255) tCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCa > 1:2941687/1‑150 (MQ=255) tCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCa > 1:1411578/1‑150 (MQ=255) tCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGAACGGCCTCCTGAAg > 2:1515507/1‑100 (MQ=37) tCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGAACGGCCTCCTGAAg < 1:1515507/100‑1 (MQ=37) aGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCggg > 2:1018010/1‑103 (MQ=255) aGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCggg < 1:1018010/103‑1 (MQ=255) aGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGt > 2:1276139/1‑150 (MQ=255) gTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGtgcat < 2:3759220/150‑1 (MQ=255) ccAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCAc < 2:4235064/150‑1 (MQ=255) ccAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCAc < 2:2174158/150‑1 (MQ=255) cAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACg < 2:4672412/150‑1 (MQ=255) ggCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGt > 2:5204098/1‑150 (MQ=255) ggCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGt < 2:2412872/150‑1 (MQ=255) tGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTTACCGTGCATGCACGGtgaa < 2:1650152/150‑4 (MQ=255) tGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGtgaa < 1:4045232/150‑4 (MQ=255) gcgcTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATa < 1:1120132/150‑1 (MQ=255) gcgcTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATa < 2:1865620/150‑1 (MQ=255) gcgcTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATa < 1:1587836/150‑1 (MQ=255) tgcGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGtgc > 1:4932559/1‑129 (MQ=255) tgcGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCaa > 1:4362440/1‑150 (MQ=255) tgcGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCaa < 1:3748158/150‑1 (MQ=255) cggcgTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTaaagt < 2:176183/141‑4 (MQ=255) ttGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCCACCGcacc > 2:4950370/1‑150 (MQ=255) tttAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGtggctgg > 2:666441/1‑97 (MQ=255) tttAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGcaccacca > 2:1850994/1‑150 (MQ=255) tttAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGcaccacca > 2:3274277/1‑150 (MQ=255) tttAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGcaccacca > 1:3316600/1‑150 (MQ=255) ttAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGcaccaccac > 1:3188440/1‑150 (MQ=255) aGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACtt > 2:1112758/1‑105 (MQ=255) gcgAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCAccggccgg < 1:3255224/150‑1 (MQ=255) cgAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCAcc > 2:5269536/1‑105 (MQ=255) cgAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCAcc < 1:5269536/105‑1 (MQ=255) gAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCAc < 1:1847593/114‑1 (MQ=255) gAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGac < 2:4362440/150‑1 (MQ=255) ggCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGacca < 2:2429646/150‑1 (MQ=255) gCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGaccac > 1:2725472/1‑150 (MQ=255) aGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGAccacca < 1:4714915/150‑1 (MQ=255) aGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGAccacca > 1:1260741/1‑150 (MQ=255) gTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAg > 1:1313632/1‑150 (MQ=255) gCGACGCAGATTGCGACTTCAGGATGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGcacaca < 2:3600/150‑1 (MQ=255) gCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGcacaca > 2:3181694/1‑150 (MQ=255) cGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGcacacac < 2:1994206/150‑1 (MQ=255) aCGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGcacacacac < 2:4505656/150‑1 (MQ=255) gCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACaa > 1:2020628/1‑150 (MQ=255) ttGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCGCCGGCCGGACCACCAGCACACACACAAATGcc > 1:624691/1‑150 (MQ=255) cgcaaCTTCAGGAGAACGGCCTCCTGAAGTCGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAATGCCa > 1:1785438/5‑150 (MQ=255) cgcaaCTTCAGGAGAACGGCCTCCTGAAGTCGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAATGCCa > 1:254317/5‑150 (MQ=255) gCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAATGCCAc > 1:2365208/1‑150 (MQ=255) cGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAATGCCAcc > 1:5238630/1‑150 (MQ=255) gACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAATGCCACCg > 1:1692168/1‑150 (MQ=255) gACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAATGCCACCg < 1:3422759/150‑1 (MQ=255) aggaggCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAATGCCACCGGCATCg > 2:3964031/1‑150 (MQ=255) gCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAATGCCACCGGCATCGCCAAc > 2:4404244/1‑150 (MQ=255) gTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAATGCCACCGGCATCGCCAACTGa < 1:4869236/150‑1 (MQ=255) ttCTCCTGAAGTTGCGGGATCAAGATCAAGCAGAGGAAGTGGCTGGCTGCGGGGCAGTTCACCGTGCATGCACGGTAATAGCCAGCAACCGCTCCACCAGCGGGCGGACCTCCAGCACACTCACAAATGCCACCGGCATCGCCAACTGAt > 2:2851185/1‑150 (MQ=255) ttCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAATGCCACCGGCATCGCCAACTGAt > 1:441799/1‑150 (MQ=255) ttCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAATGCCACCGGCATCGCCAACTGAt < 1:796375/150‑1 (MQ=255) | TCCAGCCTGACCAAACCGGATGATCCCGCGTTCCGCGCTGCTATCGAAAAGGCCATTGCCTCACAGCCGTGACCAGGCTGCGCTTGCTGCGGCGTTGCTTTAAAGCGCGAGGCAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGTTCTCCTGAAGTTGCGGGATCAAGATCAAGCACAGGAAGTGGCTGGCTGCGGGGCACTTCACCGTGCATGCACGGTAATAGCCACCAACCGCACCACCACCGGCCGGACCACCAGCACACACACAAATGCCACCGGCATCGCCAACTGAT > NC_002947/1879787‑1880085 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |