| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,889,400 | C→A | 7.1% | L305L (CTG→CTT) ‡ | PP_1695 ← | sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,889,400 | 0 | C | A | 7.1% | 537.2 / 21.2 | 164 | L305L (CTG→CTT) ‡ | PP_1695 | sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator |
| Reads supporting (aligned to +/- strand): ref base C (86/66); new base A (7/5); total (93/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 177 total aligned reads displayed.
CCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAGATGATTGC > NC_002947/1889252‑1889549 | ccATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGgcagca < 1:1114545/150‑1 (MQ=255)ccATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGgcagca < 1:1837737/150‑1 (MQ=255) cATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGgcagcag > 1:3294859/1‑150 (MQ=255) cATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGgcagcag > 2:5333501/1‑150 (MQ=255) cATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGgcagcag > 2:670079/1‑150 (MQ=255) cATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGAGCACCGTGCCGGgcagcag > 2:3594523/1‑150 (MQ=255) gACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGc > 1:2415295/1‑150 (MQ=255) aCGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCgg > 1:1799340/1‑150 (MQ=255) gCCACGGCCTCGACGATCACCCTGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCTCCTCGGCCAGGGGCAGGCTGATGAAGAACGAGTCGGAGATCACCGTGCCGGGCAGATGCTGCTGCCCGGca < 2:2006604/150‑2 (MQ=255) ccACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCa < 1:1307644/150‑1 (MQ=255) cACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAg > 2:4263061/1‑150 (MQ=255) cACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAg < 1:832475/150‑1 (MQ=255) aCGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAgg < 1:2187715/150‑1 (MQ=255) aCGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAgg > 1:5356912/1‑150 (MQ=255) ggCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGGGCCGGGCAGATGCTGCTGCCCGGcacggtg < 1:4057647/150‑7 (MQ=255) cTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAAt > 2:2306536/1‑150 (MQ=255) tCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATc > 1:2049087/1‑150 (MQ=255) tCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGcacca < 2:3072918/150‑1 (MQ=255) ccATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGa > 1:3490702/1‑150 (MQ=255) aTGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAAc > 2:2560915/1‑150 (MQ=255) ggaGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGcgcg < 2:4743118/148‑1 (MQ=255) tAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCgg < 2:4369202/150‑1 (MQ=255) ccgccgAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAgc < 2:2290084/143‑1 (MQ=255) ccgccgAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCa > 1:668569/1‑150 (MQ=255) cgccgAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAg > 1:3857373/1‑150 (MQ=255) cgccgAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGCCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAg > 2:2554735/1‑150 (MQ=255) gccgAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGt > 1:3068577/1‑150 (MQ=255) gccgAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGt < 2:1662783/150‑1 (MQ=255) gAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCCGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGcc > 1:2321073/1‑150 (MQ=255) gAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGAGGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCAGCTGCCCGGCCAGGGCAAGCGGCACCACGAACAGCGCGGCCCGTGcc > 1:2321034/1‑150 (MQ=255) aGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCa < 2:225374/150‑1 (MQ=255) aGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCa < 2:1266189/150‑1 (MQ=255) aGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCa < 2:1093119/150‑1 (MQ=255) ggCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAg < 1:4377524/150‑1 (MQ=255) gCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAgg < 1:3726575/150‑1 (MQ=255) cACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGt < 1:5135875/150‑1 (MQ=255) aCCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCCGGGGCAGGCGGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTa > 1:3549642/1‑150 (MQ=255) aCCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGtc > 2:5048019/1‑149 (MQ=255) gccgATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACAt < 1:2738091/150‑1 (MQ=255) aTGAACGCCAGCAGGGCAAGGCGCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCggg > 2:4178430/1‑150 (MQ=255) gAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGaa > 2:1064293/1‑150 (MQ=255) aaCGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAAt > 2:3935342/1‑150 (MQ=255) aCGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATa > 1:1674883/1‑150 (MQ=255) gCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATAcc < 1:2306536/150‑1 (MQ=255) ccAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCgg > 2:5121500/1‑123 (MQ=255) gcagGGCAAGGCGCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAgc > 2:5135642/1‑150 (MQ=255) cagGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAgca > 1:2184637/1‑149 (MQ=255) ggCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAgcgcgc > 2:2146316/1‑150 (MQ=255) gCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGcc > 2:300399/1‑150 (MQ=255) cAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCa < 2:3268119/150‑1 (MQ=255) aaGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAg > 2:5400027/1‑150 (MQ=255) aGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCTCCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAgg < 1:5056021/150‑1 (MQ=255) ggCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGgc < 2:2236437/150‑1 (MQ=255) cTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGgcgc > 2:2894540/1‑150 (MQ=255) cGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCaa < 1:250317/150‑1 (MQ=255) gggTGCGCCTCGGCCATGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAg < 1:5378683/150‑1 (MQ=255) ggTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGt > 2:5331638/1‑150 (MQ=255) gTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTc < 2:515076/150‑1 (MQ=255) gTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTc < 2:1239770/150‑1 (MQ=255) gcCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGc < 2:2802974/150‑1 (MQ=255) cTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCgg > 2:721411/1‑150 (MQ=255) cTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCgg < 2:1566655/150‑1 (MQ=255) cTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAACCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCgg > 2:4960416/1‑150 (MQ=255) ggCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTc < 1:2936771/150‑1 (MQ=255) ccAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGa > 2:235806/1‑150 (MQ=255) cAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTg > 1:4890287/1‑141 (MQ=255) cAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGAt > 1:2910728/1‑150 (MQ=255) gatgaCGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCcaccac < 1:1019484/150‑1 (MQ=255) tgaCGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACgg > 1:150586/1‑150 (MQ=255) gaCGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGt > 2:2256588/1‑150 (MQ=255) gaacgaGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATAcc < 2:1992278/100‑1 (MQ=255) gaacgaGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATAcc > 1:1992278/1‑100 (MQ=255) acgaGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGt > 1:5117127/1‑150 (MQ=255) gTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGaa < 1:334288/150‑1 (MQ=255) ggAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTCACGTGGAACTg > 1:927569/1‑150 (MQ=255) ggAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTg > 1:3669710/1‑150 (MQ=255) gaTCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCg > 2:2486299/1‑150 (MQ=255) gaTCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCg < 1:978528/150‑1 (MQ=255) gaTCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCg > 2:2731920/1‑150 (MQ=255) gaTCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCg < 1:2028489/150‑1 (MQ=255) gaTCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCg < 1:4708174/150‑1 (MQ=255) aTCTCCGTGCCGGGGAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGTACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGGGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCgg < 2:3522892/150‑1 (MQ=255) aCCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGggc > 2:5336339/1‑150 (MQ=255) cctggCCGGGCAGATGCTGCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGggca > 1:4580144/5‑150 (MQ=255) ccGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGggca < 1:3594523/150‑1 (MQ=255) ccGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGggca > 1:2662542/1‑150 (MQ=255) ccGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGggca < 1:1122887/150‑1 (MQ=255) tggCCGGGCAGATGCTGCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGggcagg > 2:445707/3‑150 (MQ=255) gTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGggcagg > 2:4829012/1‑150 (MQ=255) tGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCgg < 1:4613326/54‑1 (MQ=255) tGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCgg > 2:4613326/1‑54 (MQ=255) tGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGggcaggc > 1:3801495/1‑150 (MQ=255) tGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGggcaggc > 1:137518/1‑150 (MQ=255) ggCCGGGCAGATGCTGCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGggcaggc > 1:4981677/2‑150 (MQ=255) ggCCGGGCAGATGCTGCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGggcaggc > 1:4910960/2‑150 (MQ=255) ccGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGgcaggcag > 1:3319695/1‑150 (MQ=255) cGGGCAGATGCTGCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTtctc > 1:2251829/1‑115 (MQ=255) cGGGCAGATGCTGCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAga > 1:1280753/1‑150 (MQ=255) agcagcaTCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAGATGAtt < 2:4217986/150‑1 (MQ=255) cagcaTCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAGATGATTGc < 1:544240/150‑1 (MQ=255) | CCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAGATGATTGC > NC_002947/1889252‑1889549 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |