| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,889,404 | A→T | 7.3% | M304K (ATG→AAG) ‡ | PP_1695 ← | sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,889,404 | 0 | A | T | 7.3% | 528.1 / 21.9 | 164 | M304K (ATG→AAG) ‡ | PP_1695 | sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator |
| Reads supporting (aligned to +/- strand): ref base A (86/66); new base T (7/5); total (93/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01 | |||||||||||
Only 100 of 180 total aligned reads displayed.
GGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAGATGATTGCCAT > NC_002947/1889256‑1889552 | ggTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCGGGGCAAGGCGCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCAt > 1:3379406/1‑150 (MQ=255) gTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATc > 2:3726575/1‑150 (MQ=255) cGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTg < 1:1216528/150‑1 (MQ=255) gACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGc > 1:2415295/1‑150 (MQ=255) ccACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCa < 2:4799196/150‑1 (MQ=255) cACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAg > 1:1657215/1‑150 (MQ=255) aCGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAgg > 1:5356912/1‑150 (MQ=255) aCGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAgg < 1:2187715/150‑1 (MQ=255) ggCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGGGCCGGGCAGATGCTGCTGCCCGGcacggtg < 1:4057647/150‑7 (MQ=255) tCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATc > 1:2049087/1‑150 (MQ=255) gacgaTCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCagatgc < 2:2254723/150‑6 (MQ=255) tCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGcacca < 2:3072918/150‑1 (MQ=255) cATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGaa > 2:2355188/1‑150 (MQ=255) aTGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAAc > 2:2560915/1‑150 (MQ=255) ccgccgAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAgc < 2:2290084/143‑1 (MQ=255) cgccgAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAg > 1:3857373/1‑150 (MQ=255) cgccgAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGCCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAg > 2:2554735/1‑150 (MQ=255) gccgAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGt > 1:3068577/1‑150 (MQ=255) cgAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCTCCACGAACAGCGCGGCCAGTGc > 2:5056021/1‑150 (MQ=255) gAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCCGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGcc > 1:2321073/1‑150 (MQ=255) gAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGcc > 1:2320991/1‑150 (MQ=255) aGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCa < 2:1266189/150‑1 (MQ=255) cACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGt < 1:5135875/150‑1 (MQ=255) aCCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGACCAGCGCGGCCCGTGCCAGGtc > 1:3549554/1‑149 (MQ=255) aCCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTa > 1:892429/1‑150 (MQ=255) cgccgATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACa > 2:2175771/1‑150 (MQ=255) gccgATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACAt < 1:2738091/150‑1 (MQ=255) gATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCgg < 1:4379284/150‑1 (MQ=255) aTGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCggg < 2:2297997/150‑1 (MQ=255) aTGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCggg < 2:3050905/150‑1 (MQ=255) aTGAACGCCAGCAGGGCAAGGCGCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCggg > 2:4178430/1‑150 (MQ=255) gAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGaa > 2:1064154/1‑150 (MQ=255) gCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATAcc < 1:2306536/150‑1 (MQ=255) ccAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCgg > 2:5121500/1‑123 (MQ=255) ccAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCgggtaaccat < 2:5204815/150‑8 (MQ=255) cAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCa < 2:3268119/150‑1 (MQ=255) aaGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAg > 2:5400027/1‑150 (MQ=255) aGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCTCCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAgg < 1:5056021/150‑1 (MQ=255) cGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCaa < 1:250317/150‑1 (MQ=255) ggTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCg < 2:1119639/123‑1 (MQ=255) ggTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCg > 1:1119639/1‑123 (MQ=255) ggTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGt > 2:5331673/1‑150 (MQ=255) gcgcCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCt > 2:1573864/1‑150 (MQ=255) gcCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCTGCGTGCCGGTGAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGc < 2:3468826/150‑1 (MQ=255) gcCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGc > 2:4606836/1‑150 (MQ=255) gcCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGc < 2:2802974/150‑1 (MQ=255) gcCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGc > 2:2085137/1‑150 (MQ=255) cTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCgg > 2:721411/1‑150 (MQ=255) cTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAACCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGACTACCCAGCGCGCCAGGCGCAAGTCCTGCgg > 1:3671391/1‑150 (MQ=255) ggccgaGGCGCAGGCTGATGACGAACGAGTCGGAGATCACCGAGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCTGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGtt > 2:5146255/6‑150 (MQ=255) cGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGtt > 2:5361327/1‑150 (MQ=255) ggCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTc < 1:2936771/150‑1 (MQ=255) ccAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGa < 2:1272130/150‑1 (MQ=255) cAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCTGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTg < 2:4890287/141‑1 (MQ=255) cAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTg > 1:4890287/1‑141 (MQ=255) cAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGAt > 1:2910728/1‑150 (MQ=255) cAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTtctc < 1:611565/150‑1 (MQ=255) tgatgaCGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTccacca > 1:4609437/1‑150 (MQ=255) gatgaCGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCcaccac < 1:1019484/150‑1 (MQ=255) tgaCGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACgg > 1:150586/1‑150 (MQ=255) tgaCGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACgg > 1:3784381/1‑150 (MQ=255) gaCGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGt < 1:4944006/150‑1 (MQ=255) gaacgaGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATAcc < 2:1992278/100‑1 (MQ=255) acgaGTCGGAGATCACCGTTCCGGGCAGCAGCATCTGCCCGGCCAGTGCAATCGGCACCACGTACAGCGCGGCCAGTGCCAGGTACATCTGGAATACCCAGCGCGCCAGTCGCTAGTCCTGCGGTTCGATGTTCTCCACCACGGTTActt < 2:4346074/150‑3 (MQ=255) acgaGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGt > 1:5117127/1‑150 (MQ=255) gTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGaa < 2:4161326/150‑1 (MQ=255) ggAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTCACGTGGAACTg > 1:927569/1‑150 (MQ=255) ggAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTg > 1:3669710/1‑150 (MQ=255) gagaTCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGTTACCGTggtggaga < 2:1087913/150‑7 (MQ=255) gagaTCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGt > 1:805433/1‑150 (MQ=255) gagaTCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGt > 1:1288019/1‑150 (MQ=255) gaTCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCg > 2:2731920/1‑150 (MQ=255) gaTCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCg > 2:2486299/1‑150 (MQ=255) gaTCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCg < 1:4708174/150‑1 (MQ=255) gaTCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCg < 1:2028563/150‑1 (MQ=255) ccGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGggca < 1:3594523/150‑1 (MQ=255) ccGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGggca > 1:5386709/1‑150 (MQ=255) ccGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGggca > 1:2662542/1‑150 (MQ=255) ccGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGggca < 2:2423091/150‑1 (MQ=255) tGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCgg > 2:4613326/1‑54 (MQ=255) tGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGggcaggc > 1:137518/1‑150 (MQ=255) ggCCGGGCAGATGCTGCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGggcaggc < 2:4981677/149‑1 (MQ=255) ggCCGGGCAGATGCTGCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGggcaggc > 1:4910960/2‑150 (MQ=255) ccGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGgcaggcag > 1:3319795/1‑150 (MQ=255) ccGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGgcaggcag > 1:3319695/1‑150 (MQ=255) cGGGCAGATGCTGCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTtctc < 2:2251829/115‑1 (MQ=255) cGGGCAGATGCTGCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTtctc > 1:2251829/1‑115 (MQ=255) gggCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAgat < 1:202129/150‑1 (MQ=255) gggCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAgat < 2:2906116/150‑1 (MQ=255) agcagcaTCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAGATGAtt < 1:1851785/150‑1 (MQ=255) agcagcaTCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAGATGAtt < 2:4217986/150‑1 (MQ=255) cagcaTCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAGATGATTGc < 1:1749661/150‑1 (MQ=255) cagcaTCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAGATGATTGc < 1:4263061/150‑1 (MQ=255) cagcaTCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAGATGATTGc < 2:4422123/150‑1 (MQ=255) agcaTCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAGATGATTGcc > 1:5356418/1‑150 (MQ=255) gcaTCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAGATGATTGCca > 2:615880/1‑150 (MQ=255) gcaTCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAGATGATTGCca > 2:616164/1‑150 (MQ=255) caTCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTtc < 1:2137458/103‑1 (MQ=255) caTCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTtc > 2:2137458/1‑103 (MQ=255) caTCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAGATGATTGCcat > 2:1737300/1‑150 (MQ=255) | GGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTCGATGTTCTCCACCACGGTAACGTGGAACTGTCGGGGCAGGCAGATGATTGCCAT > NC_002947/1889256‑1889552 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |