| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,899,849 | A→T | 5.9% | K120* (AAG→TAG) ‡ | PP_1703 → | assimilatory nitrate reductase/sulfite reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,899,849 | 0 | A | T | 5.9% | 603.5 / 20.2 | 186 | K120* (AAG→TAG) ‡ | PP_1703 | assimilatory nitrate reductase/sulfite reductase |
| Reads supporting (aligned to +/- strand): ref base A (69/106); new base T (4/7); total (73/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.55e-01 | |||||||||||
Only 100 of 200 total aligned reads displayed.
CAGCCAGCCGCCAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTG > NC_002947/1899701‑1899998 | cagccagcCGCCAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCcaacaa < 2:5239454/150‑1 (MQ=255)cagccagcCGCCAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCcaacaa < 2:4856915/150‑1 (MQ=255) agccagccGCCAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAg < 1:5361600/150‑1 (MQ=255) ccagccGCCAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGtt < 2:3250308/150‑1 (MQ=255) cagccGCCAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTg < 1:5360970/150‑1 (MQ=255) cagccGCCAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTg < 1:5251859/150‑1 (MQ=255) cagccGCCAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTg < 2:4193375/150‑1 (MQ=255) cgccAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTg > 2:4533701/1‑146 (MQ=255) cgccAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTg < 1:4533701/146‑1 (MQ=255) gccAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACTTGTTGGCCag < 1:3225785/150‑2 (MQ=255) aGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCaa > 2:933110/1‑147 (MQ=255) aGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAggg < 2:4494507/150‑1 (MQ=255) cgcACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCttt < 1:1892945/150‑1 (MQ=255) cgcACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCttt < 2:675181/150‑1 (MQ=255) gcACCAGCATGGACCAGGCCATCGCTGCCACCGCCTAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGAACCTGGCCAACAAGTTGGCCAAGGGCTTTa > 1:4332485/1‑150 (MQ=255) aCCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGcc > 2:1649553/1‑138 (MQ=255) ccAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATcc < 1:4264381/150‑1 (MQ=255) ccAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATcc < 2:414292/150‑1 (MQ=255) tGGACCCGGCCACGGGTGCCCCCGCCGTGCGGCTGCGCGGATTCTGGGCCCCGCCGGGCCCGGAGGCCGTGGCGCGGTAGGTGGCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTAcgc < 2:4285188/150‑1 (MQ=255) cAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCcac > 2:5347198/1‑150 (MQ=255) aGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCcaca > 1:5039834/1‑150 (MQ=255) gCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATc > 1:96298/1‑150 (MQ=255) ccATCGCTGCCACAGCCGAGCCTATGCGCGGAATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGACCGGGCAAATTTCGCTGGAGGCCCAGTACATGGCCAACAAGTTGGCCAAGGGATTTATCCGTACGCGCCACAACg > 2:790326/1‑150 (MQ=255) aTCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAg < 1:768430/150‑1 (MQ=255) tCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCca > 2:1854512/1‑142 (MQ=255) cGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTc < 1:3622870/150‑1 (MQ=255) cGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTc < 1:4972403/150‑1 (MQ=255) ccACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCTACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACt > 2:4016296/1‑150 (MQ=255) aCCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTcg > 2:2260890/1‑150 (MQ=255) ccgccgAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTcgc > 2:4296471/1‑150 (MQ=255) ccgccgAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTcgc > 2:3913285/1‑150 (MQ=255) gAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCtg > 2:1174664/1‑150 (MQ=255) aGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCtgt > 1:5340123/1‑150 (MQ=255) cTGCGCGGCATCATCGACCAGCACGGCCCGGATGGCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATg < 1:2362411/150‑1 (MQ=255) cTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATg < 2:2197517/150‑1 (MQ=255) tGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATgg > 2:479204/1‑150 (MQ=255) gcgcGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGgc < 1:296128/150‑1 (MQ=255) gcgGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGgcca > 1:2420365/1‑150 (MQ=255) gcgGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGgcca > 1:3000861/1‑150 (MQ=255) gcgGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGgcca > 1:5148958/1‑150 (MQ=255) ggCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGgccagc < 1:2766938/150‑1 (MQ=255) ggCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGgccagc > 1:4983083/1‑150 (MQ=255) catcatCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGgccagcgc < 1:2930822/150‑1 (MQ=255) tcatcGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGgccagcgcca < 1:1488676/150‑1 (MQ=255) tcatcGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGgccagcgcca < 2:1985774/150‑1 (MQ=255) tcatcGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGgccagcgcca < 1:3928370/150‑1 (MQ=255) tcGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGgccggcgccaagc > 2:4979930/1‑147 (MQ=255) gACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGt < 1:3713466/150‑1 (MQ=255) gACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGt < 2:2856265/150‑1 (MQ=255) gACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGt < 2:897191/150‑1 (MQ=255) gACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGt < 2:129802/150‑1 (MQ=255) gACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGt < 1:2265139/150‑1 (MQ=255) ccAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTgg < 2:2420365/150‑1 (MQ=255) ccAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTgg < 2:5148958/150‑1 (MQ=255) aGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCt > 1:173526/1‑150 (MQ=255) aGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCt > 2:5396468/1‑150 (MQ=255) gCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTAt < 2:4422159/90‑1 (MQ=255) gCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTAt > 1:4422159/1‑90 (MQ=255) gCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATg < 1:1786561/130‑1 (MQ=255) aCGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACa < 1:4092514/150‑1 (MQ=255) cGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACaa < 1:992273/150‑1 (MQ=255) cccGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCt > 1:2016633/1‑150 (MQ=255) gATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCg > 1:3199830/1‑150 (MQ=255) gATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCg < 2:1397424/150‑1 (MQ=255) aTGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGc < 1:4708119/150‑1 (MQ=255) gCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCtt < 2:1774247/150‑1 (MQ=255) gTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGgc > 2:3807831/1‑150 (MQ=255) gcgcTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCgcgc > 1:4304475/1‑102 (MQ=255) cgcTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCg < 2:3519951/150‑1 (MQ=255) gcTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGa < 1:2845819/150‑1 (MQ=255) gcTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGa < 1:76473/150‑1 (MQ=255) gcTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGa > 2:4684937/1‑150 (MQ=255) gcTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGa > 1:1543327/1‑150 (MQ=255) cGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGccc < 1:3908941/150‑1 (MQ=255) cAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGt > 1:4864894/1‑150 (MQ=255) tGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTCCAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTAcc > 1:4377511/1‑150 (MQ=255) gTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCa < 1:715259/150‑1 (MQ=255) gTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCa < 1:1038261/150‑1 (MQ=255) gCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGa < 2:432370/150‑1 (MQ=255) cTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGAc < 2:5105125/150‑1 (MQ=255) gAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTc < 1:3800860/150‑1 (MQ=255) gAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTc < 2:2684749/150‑1 (MQ=255) ccAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTc > 1:1073619/1‑57 (MQ=255) ccAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTc < 2:1073619/57‑1 (MQ=255) ccAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCa > 1:1670745/1‑150 (MQ=255) aaagccccTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCa > 2:3050916/7‑150 (MQ=255) gTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGc > 1:1967500/1‑150 (MQ=255) ccTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGa > 1:1241991/1‑150 (MQ=255) ttGGCCAACTTGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTAc < 2:4929738/128‑1 (MQ=255) ttGGCCAACTTGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGAc > 1:3411070/2‑150 (MQ=255) tGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACg > 2:2114790/1‑150 (MQ=255) gCCAACTTGTTGGCCAGGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCa > 1:1513613/1‑128 (MQ=255) gCCAACTTGTTGGCCAGGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCa < 2:1513613/128‑1 (MQ=255) caacaaGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTAtt > 1:571756/1‑150 (MQ=255) aacaaGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGTAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTAttt > 1:3777926/1‑150 (MQ=255) aacaaGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGt < 1:2979554/78‑1 (MQ=255) aacaaGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGt > 2:2979554/1‑78 (MQ=255) aacaaGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTAttt > 2:624252/1‑150 (MQ=255) aaGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTg < 2:1549138/150‑1 (MQ=255) aaGTTGGCCAAGGGCATTATCCGTTCGCGCCACATCGAGTCCAACTCGCGCCTGTTCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTg < 2:4332485/150‑1 (MQ=255) | CAGCCAGCCGCCAGTGCGCACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTG > NC_002947/1899701‑1899998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |