| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,918,299 | T→C | 6.1% | intergenic (‑33/+85) | PP_1718 ← / ← prc | EAL domain‑containing diguanylate phosphodiesterase/tail‑specific protease Prc |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,918,299 | 0 | T | C | 6.1% | 410.5 / 10.5 | 131 | intergenic (‑33/+85) | PP_1718/prc | EAL domain‑containing diguanylate phosphodiesterase/tail‑specific protease Prc |
| Reads supporting (aligned to +/- strand): ref base T (58/65); new base C (4/4); total (62/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.23e-01 | |||||||||||
Only 100 of 131 total aligned reads displayed.
CCTCATGGCCGAATACCCTATGTTCACTCAGGCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGAGGTAGTCGATCAGGATGCGACCGGTTTCCGCG > NC_002947/1918152‑1918447 | ccTCATGGCCGAATACCCTATGTTCACTCAGGCACCTGATTGGCTGGATCAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAATGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGc < 2:398814/150‑1 (MQ=255)ccTCATGGCCGAATACCCTATGTTCACTCAGGCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGc < 2:592201/150‑1 (MQ=255) tCATGGCCGAATACCCTATGTTCACTCAGGCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCAt > 2:1467293/1‑150 (MQ=255) cATGGCCGAATACCCTATGTTCACTCAGGCACATGATCGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATg > 1:3090600/1‑150 (MQ=255) ggCCGAATACCCTATGTTCACTCAGGCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGccc < 2:2677343/150‑1 (MQ=255) ccGAATACCCTATGTTCACTCAGGCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATGCAGATGCCCgg < 2:328539/150‑1 (MQ=255) ccGAATACCCTATGTTCACTCAGGCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCgg < 2:3087678/150‑1 (MQ=255) gAATACCCTATGTTCACTCAGGCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATGCAGATGCCCGGcc < 1:3352201/150‑1 (MQ=255) gAATACCCTATGTTCACTCAGGCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGcc < 1:406673/150‑1 (MQ=255) aTACCCTATGTTCACTCAGGCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCt < 2:1336445/150‑1 (MQ=255) tACCCTATGTTCACTCAGGCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATGCAGATGCCCGGCCCtt < 2:4205178/150‑2 (MQ=255) ccTATGTTCACTCAGGCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCata > 1:543816/1‑150 (MQ=255) ccTATGTTCACTCAGGCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCata > 1:2361530/1‑150 (MQ=255) tATGTTCACTCAGGCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATAtt > 2:2185309/1‑150 (MQ=255) tGTTCACTCAGGCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTc < 2:4749555/150‑1 (MQ=255) gTTCACTCAGGCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCa > 2:482402/1‑150 (MQ=255) gTTCACTCAGGCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCa < 1:4750311/150‑1 (MQ=255) ttCACTCAGGCTCATGTTTGTCTGGAACAGACTTTTTATACTGCGCTGAGCCAGGATGGAACTAAAGGAAGTTAGGTGTTCGGATACGGTCTTGTTGGATTCATTAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCATCATATTTCAc < 1:2050538/150‑1 (MQ=255) ttCACTCAGGCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCAc < 1:3060733/150‑1 (MQ=255) aCTCAGGCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGAc > 2:3449932/1‑150 (MQ=255) aCTCAGGCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGAc > 1:3409119/1‑150 (MQ=255) cTCAGGCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACa > 2:687847/1‑150 (MQ=255) cTCAGGCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACa < 1:5387362/150‑1 (MQ=255) ggCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTTACTTTTCAGGaatccat < 1:451656/150‑7 (MQ=255) gCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACg > 1:159956/1‑150 (MQ=255) cacaTGATGGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGa < 1:604021/150‑1 (MQ=255) acaTGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGAt < 2:1603972/150‑1 (MQ=255) acaTGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGAt < 2:1415765/150‑1 (MQ=255) acaTGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGAt < 1:3847107/150‑1 (MQ=255) acaTGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGAt < 1:3846996/150‑1 (MQ=255) tGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGAc > 2:5111442/1‑150 (MQ=255) gATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACt > 2:72942/1‑150 (MQ=255) ttGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGt > 1:417766/1‑150 (MQ=255) ttGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGt > 2:1271919/1‑150 (MQ=255) gAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTtgatga > 2:3808381/1‑150 (MQ=255) gAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCAGGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTtgatga < 1:1965527/150‑1 (MQ=255) aCAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACa < 1:5109799/150‑1 (MQ=255) aGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGa < 2:164862/150‑1 (MQ=255) tgtgAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATcac > 1:2107324/1‑150 (MQ=255) gtgAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACt > 2:4532797/1‑132 (MQ=255) gtgAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATcaca < 2:4099503/150‑1 (MQ=255) gtgAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATcaca > 1:2289943/1‑150 (MQ=255) gcgAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATcaca > 1:4787171/3‑150 (MQ=255) tgAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACat > 1:3710014/1‑150 (MQ=255) tACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACattatt < 2:2861368/150‑1 (MQ=255) cTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGCCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCt < 2:2211984/150‑1 (MQ=255) tGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTg > 1:1977808/1‑150 (MQ=255) tGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATGATTCTGCcatc > 2:2387340/1‑150 (MQ=255) aGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCcatcat > 1:365044/1‑150 (MQ=255) ccAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTg > 1:1096582/1‑150 (MQ=255) aGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCt > 2:1663921/1‑150 (MQ=255) aTGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAg < 1:3527227/150‑1 (MQ=255) aCTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCata < 1:5360527/84‑1 (MQ=255) aCTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCata > 2:5360527/1‑84 (MQ=255) aCTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGcc > 2:153819/1‑150 (MQ=255) aCTCAAGGCACTGAGCTGTTCGGCAACGGCCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGcc < 2:3378099/150‑1 (MQ=255) tCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCtt > 1:5299504/1‑150 (MQ=255) aGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGa < 2:1972941/98‑1 (MQ=255) aGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGa > 1:1972941/1‑98 (MQ=255) aGGCACTGAGCTGTTCGGCAACGGTCACGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCt > 2:743135/1‑146 (MQ=255) cTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTg < 2:3937146/150‑1 (MQ=255) cTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTg < 2:5128269/150‑1 (MQ=255) cTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTg < 1:842089/150‑1 (MQ=255) cTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTg < 1:123476/150‑1 (MQ=255) cTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTg < 1:1582890/150‑1 (MQ=255) tGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGttt < 1:4009414/98‑1 (MQ=255) tGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCAcc > 1:2770994/1‑150 (MQ=255) ttCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCtt > 1:1104773/1‑150 (MQ=255) ttCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGGTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCtt > 2:5255904/1‑150 (MQ=255) cGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTgg < 2:1100016/150‑1 (MQ=255) ggTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGc > 2:2437362/1‑150 (MQ=255) tCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGttt > 2:2104654/1‑80 (MQ=255) tCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGttt < 1:2104654/80‑1 (MQ=255) tCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCAc > 2:5404851/1‑150 (MQ=255) tgatgGATTCCTTAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGa < 1:4852152/150‑1 (MQ=255) tgatgGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGa > 2:3970136/1‑150 (MQ=255) tgatgGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGa > 1:4470106/1‑150 (MQ=255) gatgGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGAg < 2:1941117/150‑1 (MQ=255) gatgGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGAg > 2:456858/1‑150 (MQ=255) gatgGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGAg < 1:5046197/150‑1 (MQ=255) tgGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGAGGt > 2:2870751/1‑150 (MQ=255) aTTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGAGGTAGt < 2:1741939/150‑1 (MQ=255) tGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGAGGTAGTCGATc < 1:1467293/150‑1 (MQ=255) tGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGAGGTAGTCGATc > 1:778442/1‑150 (MQ=255) tGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGAGGTAGTCGATc > 1:656167/1‑150 (MQ=255) tGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCAAATTTCACGACAGCACGATGACTGTTTGATGACAGATCAAATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGAGGTAGTCGATc > 1:1142785/1‑150 (MQ=255) gaaatatAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGAGGTAGTCGATCa > 1:2951464/7‑150 (MQ=255) aaaaGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGAGGTAGTCGATCAg > 2:3627650/1‑150 (MQ=255) aaaaGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGAGGTAGTCGATCAg > 2:1409952/1‑150 (MQ=255) gaGGGCCGGGCATGCAGATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGt > 1:2339279/2‑96 (MQ=38) gggCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGAGGTAGTCGATCAGGATGCGAc < 2:2361530/150‑1 (MQ=255) ggCCGGGCATGCAGATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGAGGTAGTCGATCAGGATGCGAcc > 1:2258140/1‑150 (MQ=255) ggCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGAGGTAGTCGATCAGGATGCGAcc > 1:658464/1‑150 (MQ=255) ggCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGAGGTAGTCGATCAGGATGCGAcc > 1:3833091/1‑150 (MQ=255) ggCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGAGGTAGTCGATCAGGATGCGAcc > 1:4958801/1‑150 (MQ=255) gCCGGGCATGCAGATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGAGGTAGTCGATCAGGATGCGACCg > 1:3926172/1‑150 (MQ=255) gggCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGAGGTAGTCGATCAGGATGCGACCGGtt > 2:1313537/1‑150 (MQ=255) gCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATcaca < 1:3758465/63‑1 (MQ=255) gCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATcaca > 2:3758465/1‑63 (MQ=255) cATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGAGGTAGTCGATCAGGATGCGACCGGTTTcc < 2:4809843/150‑1 (MQ=255) | CCTCATGGCCGAATACCCTATGTTCACTCAGGCACATGATTGGCTGGAACAGACTGTGAATACTGCGCTGAGCCAGGATGGCACTCAAGGCACTGAGCTGTTCGGCAACGGTCATGATGGATTCCTGAAAAGTAAGGGCCGGGCATCTGCATGCCCGGCCCTCATATTTCACGACAGCACGATGACTGTTTGATGACAGATCACATTATTCTGCCATCATTGCTGAGGTGCCTTACTTCTTGGCCACCTTGGTGCTGGCACTGAGGTAGTCGATCAGGATGCGACCGGTTTCCGCG > NC_002947/1918152‑1918447 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |