| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,973,914 | A→T | 5.5% | intergenic (+28/‑120) | gyrA → / → serC | DNA gyrase subunit A/3‑phosphoserine/phosphohydroxythreonine aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,973,914 | 0 | A | T | 5.5% | 466.9 / 13.3 | 158 | intergenic (+28/‑120) | gyrA/serC | DNA gyrase subunit A/3‑phosphoserine/phosphohydroxythreonine aminotransferase |
| Reads supporting (aligned to +/- strand): ref base A (79/65); new base T (7/2); total (90/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.00e-01 | |||||||||||
Only 100 of 159 total aligned reads displayed.
AGGAGCCGTCCGAGGACGAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTGCGC > NC_002947/1973765‑1974062 | aGGAGCCGTCCGAGGACGAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCa > 1:4106543/1‑150 (MQ=255) ccGTCCGAGGACGAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTc < 1:3920814/150‑1 (MQ=255) cGAGGACGAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGcccc > 2:1143643/1‑150 (MQ=255) aGGACGAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGt < 1:3673774/150‑1 (MQ=255) aGGACGAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGt > 2:1635218/1‑150 (MQ=255) cGAACTCGACGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGa < 1:1003493/150‑1 (MQ=255) gAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGAc < 2:3828684/150‑1 (MQ=255) aCTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACtg > 2:889076/1‑150 (MQ=255) aCTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACtg > 2:4361237/1‑150 (MQ=255) tCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACtgtg < 1:4719151/150‑1 (MQ=255) cGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTgtgt < 1:672838/150‑1 (MQ=255) gATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACACTGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTGGACTgtgtc > 2:4908280/1‑149 (MQ=255) gATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTa > 1:3117398/1‑150 (MQ=255) tGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAgg > 2:3023409/1‑150 (MQ=255) gAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGa < 2:1275994/150‑1 (MQ=255) gTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCg > 1:4224104/1‑150 (MQ=255) tGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCgg > 2:5301575/1‑150 (MQ=255) aTCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGc > 2:4040356/1‑150 (MQ=255) tCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGCCCCACGTCGCCCCGGGTGTCGGGGGAGGAGCGGGCt > 1:983336/1‑150 (MQ=255) cGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCtt < 2:1731056/150‑1 (MQ=255) agaCGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGc > 1:3778337/1‑150 (MQ=255) agaCGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCCGTTGACTGTGTATGAGCGGGCATGc > 1:2945901/1‑150 (MQ=255) gacggacgAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGcc > 1:4995472/1‑150 (MQ=255) acgAGGAGTGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGATTGACTGTGTAGGAGCGGGCAAGCCcgctc < 1:2452111/150‑3 (MQ=255) acgAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAACGGGGCGACCTTGGTCGCCCCgctcgg < 2:4519678/124‑6 (MQ=255) gaggagGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATg < 1:4404294/150‑1 (MQ=255) gaggagGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATg > 2:3063576/1‑150 (MQ=255) gaggGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAACGTCGCCCCCTTTGACGGTGTAGGAGCGGGCATGCCCCCGATGCAg > 1:3440707/1‑150 (MQ=255) gggTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGATTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGgc < 2:3370682/150‑1 (MQ=255) gggTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCGGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGgc < 2:894554/150‑1 (MQ=255) ggTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGGTTGACTGTGTAGGAGCGGGCTTTCCCGCGATGCAcgcg > 1:3240583/1‑150 (MQ=255) gAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCg > 1:2629640/1‑150 (MQ=255) gAGGCTGTAGCGCCAGACAAGGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGGTGGACGGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCg > 2:5268376/1‑150 (MQ=255) aGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGa < 1:5441807/150‑1 (MQ=255) aGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGa > 1:2665658/1‑150 (MQ=255) ggCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAGGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGAt < 2:728868/150‑1 (MQ=255) tGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCt < 1:2338549/150‑1 (MQ=255) tGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCCGTTGAATGTGTAGGAGCGGGCTTTCCCCCGATGCAGGCGCCACCCATCCt > 1:5182112/1‑150 (MQ=255) aGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCa < 1:2632201/150‑1 (MQ=255) cgcCAGACAATGAAAATGAAGCAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATg < 2:5152310/150‑1 (MQ=255) cgcCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATg < 2:420880/150‑1 (MQ=255) ccAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGa > 2:2087339/1‑150 (MQ=255) aatgaaaatgaaGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTgg > 2:379477/1‑150 (MQ=255) aatgaaaatgaaGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTgg < 1:3375827/150‑1 (MQ=255) aatgaaaatgaaGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTgg < 2:876093/150‑1 (MQ=255) aatgaaaatgaaGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCCTTTGACTGTTTAGGAGCGGGCTTTACCGCGATGCAGGCGCCCACCATACAGCATGGaaatttg > 1:1043533/1‑145 (MQ=255) tgaaaatgaaGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGcc > 2:2774303/1‑150 (MQ=255) tgaaaatgaaGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCCTTTGTCTGTGTAGGCGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCCTGGAATGTgggc > 1:3886270/1‑148 (MQ=255) gaaaatgaaGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCa > 2:2700371/1‑150 (MQ=255) aaaatgaaGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCAc < 1:869436/150‑1 (MQ=255) aaatgaaGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAAtgt > 1:4429622/1‑143 (MQ=255) aaatgaaGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAAtgt < 2:4429622/143‑1 (MQ=255) tgaaGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGaa > 2:612323/1‑150 (MQ=255) gaagaaGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTGAGCGTAAACCCGAGCGGGGCGCCCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAAt > 2:546980/1‑150 (MQ=255) aagaagCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGGCCAAGGTCGCCCCGTTTGACTGTGTTGGAGCCGGCATTCCCCCGATGCAGGCGCCACCCAACCTGCATGGCATGTTGCCCCCGAAtt > 1:1611474/1‑150 (MQ=255) agaagCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTa < 2:1979975/150‑1 (MQ=255) gaagCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTAc > 2:1399010/1‑150 (MQ=255) gaagCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTAc > 1:2257574/1‑150 (MQ=255) agCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAAGTACGa > 2:2196116/1‑150 (MQ=255) gCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGGTTGTCTGGGTAGGAGCGGGCTTGCCCGCGCTGCAGGCGCCACCCATCCGGCCAGGGCAGTGGCCACCGAAATACGAt > 1:2935586/1‑150 (MQ=255) cAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCCAGGTCGCCCCGTTTGACGGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGCTCCTGCATGGAATGTGGCCACCGAATTACGATTTTg > 2:4322292/1‑150 (MQ=255) cAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTg < 1:1143643/150‑1 (MQ=255) ggTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGtt < 1:4511474/150‑1 (MQ=255) ggTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGtt < 1:1854825/150‑1 (MQ=255) tGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCt > 2:3266958/1‑150 (MQ=255) cgacgaGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCCCCGATCCTGCCTGGACTGTGGCCACCGAATTACGATTTTGTTCTAtt > 2:2316784/1‑150 (MQ=255) cgaGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCAGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTgg < 2:5364419/150‑1 (MQ=255) ccccGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGCTCCTGCATGGACAGTGGCCACCGAATTACGATTTTGTTCTATTTGGCagag > 2:2996124/1‑150 (MQ=255) cccGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGc > 2:4497217/1‑150 (MQ=255) cccGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGGTTGACTGTGTAGGAGCGGGCTTGCCCGCGAAGCAGGCGCCACCGATCCGGCCTGGAATGTGGCCACCGACTTACGATTTTGTTCTATTTGGCAGAGc > 1:3586511/1‑150 (MQ=255) cGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCga < 1:3440838/150‑1 (MQ=255) cGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCga < 2:4077781/150‑1 (MQ=255) cGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCga < 1:705499/150‑1 (MQ=255) aaGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGagag < 1:4945461/150‑1 (MQ=255) aaGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGagag < 1:5329031/150‑1 (MQ=255) agtaagtaAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTgg < 1:2087339/150‑1 (MQ=255) agtaagCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGAtgt < 1:4129586/150‑1 (MQ=255) gtaagCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCt < 1:593595/89‑1 (MQ=255) taagCGTAAACCCGAGCGGGGCGGCCCACGTCCCCCCCGTTGACTGTGTTGGAGCGGGCTTTCCCGCGAAGCAGGCGCCCCCCCTCCGGCCGGGCAAGTGGCCCCCGAAGTACGATTTTTTTGTATTTGGGAGAGCGAGAGTGGGTGTGa > 1:263761/1‑150 (MQ=255) agCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGc < 2:2935586/150‑1 (MQ=255) tAAACCCGAGCGGGGCGACCAAGGTCGCCCCCTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAAc > 1:3163293/1‑150 (MQ=255) aaaCCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACg > 2:4046399/1‑150 (MQ=255) aaaCCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACg > 2:3443708/1‑150 (MQ=255) aaCCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGa < 2:195934/150‑1 (MQ=255) cccGAGCGGGGCGACCAACGTCGCCCCCTTTTACTGTGTAGGAGCGGGCTTGCCCGCCATGCAGGCGCCACCGATCCAGCATTGAATGTGGCCACCCAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGc > 2:4666510/1‑150 (MQ=255) aacGGGGCGACCTTGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGACTGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCttt > 1:4248200/3‑150 (MQ=255) gCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTa > 1:4712328/1‑150 (MQ=255) cGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTaa < 1:722506/150‑1 (MQ=255) ggggCGACCTTGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAAc > 1:1284792/1‑150 (MQ=255) ggggCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAAc < 1:5268376/150‑1 (MQ=255) gggCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACt > 1:2265176/1‑150 (MQ=255) gggCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACt > 1:2768274/1‑150 (MQ=255) gggCGACCAAGGTCGCCCCGTTTGACGGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACt > 2:3555592/1‑150 (MQ=255) gACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTg > 2:3717401/1‑150 (MQ=255) aCCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTgc > 2:5057317/1‑150 (MQ=255) aCCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTgc < 1:4361237/150‑1 (MQ=255) ccAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTgcg > 2:1717444/1‑150 (MQ=255) cAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCaga < 2:1689190/109‑1 (MQ=255) cAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCaga > 1:1689190/1‑109 (MQ=255) cAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTgcgc > 1:3223222/1‑150 (MQ=255) | AGGAGCCGTCCGAGGACGAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTGCGC > NC_002947/1973765‑1974062 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |