| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,973,915 | A→T | 5.6% | intergenic (+29/‑119) | gyrA → / → serC | DNA gyrase subunit A/3‑phosphoserine/phosphohydroxythreonine aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,973,915 | 0 | A | T | 5.6% | 502.4 / 13.5 | 158 | intergenic (+29/‑119) | gyrA/serC | DNA gyrase subunit A/3‑phosphoserine/phosphohydroxythreonine aminotransferase |
| Reads supporting (aligned to +/- strand): ref base A (83/64); new base T (7/2); total (90/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.04e-01 | |||||||||||
Only 100 of 158 total aligned reads displayed.
CCGTCCGAGGACGAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTGCGC > NC_002947/1973770‑1974062 | ccGTCCGAGGACGAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTc < 1:3920814/150‑1 (MQ=255) cGAGGACGAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGcccc > 2:1143643/1‑150 (MQ=255) aGGACGAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGt > 2:1635218/1‑150 (MQ=255) aGGACGAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGt < 1:3673774/150‑1 (MQ=255) cGAACTCGACGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGa < 1:1003493/150‑1 (MQ=255) gAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGAc < 2:3828684/150‑1 (MQ=255) gAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGAc > 1:4395153/1‑150 (MQ=255) aCTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACtg > 2:889076/1‑150 (MQ=255) cGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTgtgt < 1:672806/150‑1 (MQ=255) cGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTgtgt < 1:672838/150‑1 (MQ=255) gATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTa < 1:770999/150‑1 (MQ=255) gATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTa > 1:3117398/1‑150 (MQ=255) gAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGa < 1:2560154/150‑1 (MQ=255) gAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGa > 2:3332644/1‑150 (MQ=255) tGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCgg > 2:5301575/1‑150 (MQ=255) aTCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGc > 2:4040356/1‑150 (MQ=255) agaCGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGc > 1:3778337/1‑150 (MQ=255) agaCGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCCGTTGACTGTGTATGAGCGGGCATGc > 1:2945901/1‑150 (MQ=255) gacggacgAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGcc > 2:4950500/1‑150 (MQ=255) acgAGGAGTGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGATTGACTGTGTAGGAGCGGGCAAGCCcgctc < 1:2452111/150‑3 (MQ=255) acgAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAACGGGGCGACCTTGGTCGCCCCgctcgg > 1:4519678/1‑119 (MQ=255) acgAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAACGGGGCGACCTTGGTCGCCCCgctcgg < 2:4519678/124‑6 (MQ=255) gaggagGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATg > 2:3063576/1‑150 (MQ=255) gaggagGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATg < 1:4404294/150‑1 (MQ=255) aggaggGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGc < 2:1919640/150‑1 (MQ=255) gggTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGgc < 1:5301575/150‑1 (MQ=255) gggTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGATTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGgc < 2:3370682/150‑1 (MQ=255) gggTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCGGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGgc < 2:894554/150‑1 (MQ=255) ggTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGGTTGACTGTGTAGGAGCGGGCTTTCCCGCGATGCAcgcg > 1:3240583/1‑150 (MQ=255) gtgtCGAGGCTGTAGCGCCAGACAATGAAAATGAAGACGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGgcgc < 2:2378880/150‑1 (MQ=255) gAGGCTGTAGCGCCAGACAAGGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGGTGGACGGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCg > 2:5268376/1‑150 (MQ=255) aGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGa > 1:2665658/1‑150 (MQ=255) aGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGa < 1:5441807/150‑1 (MQ=255) ggCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAGGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGAt < 2:728868/150‑1 (MQ=255) tGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCt < 1:2338549/150‑1 (MQ=255) tGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCCGTTGAATGTGTAGGAGCGGGCTTTCCCCCGATGCAGGCGCCACCCATCCt > 1:5182112/1‑150 (MQ=255) aGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCa < 1:2632201/150‑1 (MQ=255) cgcCAGACAATGAAAATGAAGCAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATg < 2:5152310/150‑1 (MQ=255) cgcCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATg < 2:420880/150‑1 (MQ=255) ccAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGa > 2:2087339/1‑150 (MQ=255) aGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCCAGGTCGCCCCCGTTGACGGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGCTCCTGCATGGAAt > 1:2884798/1‑150 (MQ=255) aatgaaaatgaaGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTgg < 2:876093/150‑1 (MQ=255) aatgaaaatgaaGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTgg < 1:3375827/150‑1 (MQ=255) aatgaaaatgaaGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCCTTTGACTGTTTAGGAGCGGGCTTTACCGCGATGCAGGCGCCCACCATACAGCATGGaaatttg > 1:1043533/1‑145 (MQ=255) gaaaatgaaGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCa > 2:2700371/1‑150 (MQ=255) aaaatgaaGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCAc < 1:869436/150‑1 (MQ=255) aaatgaaGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAAtgt < 2:4429622/143‑1 (MQ=255) tgaaGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGaa > 2:612323/1‑150 (MQ=255) gaagaaGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTGAGCGTAAACCCGAGCGGGGCGCCCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAAt > 2:546980/1‑150 (MQ=255) aagaagCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGGCCAAGGTCGCCCCGTTTGACTGTGTTGGAGCCGGCATTCCCCCGATGCAGGCGCCACCCAACCTGCATGGCATGTTGCCCCCGAAtt > 1:1611474/1‑150 (MQ=255) gaagCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTAc > 1:2257574/1‑150 (MQ=255) gaagCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTAc > 2:1399010/1‑150 (MQ=255) agCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGa < 1:504786/150‑1 (MQ=255) agCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAAGTACGa > 2:2196116/1‑150 (MQ=255) gCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTTAGCGTAAACCCGAGCGGGGCGACCCAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGAt < 1:4137355/150‑1 (MQ=255) tGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACACGAGCGGGGCGACCAAGGTCGCACCCTGTGAATGTGTAGGAGACGGCTAGCCCGCCAAGCACGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTAAGAttt > 1:5340839/1‑150 (MQ=255) cAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCCAGGTCGCCCCGTTTGACGGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGCTCCTGCATGGAATGTGGCCACCGAATTACGATTTTg > 2:4322292/1‑150 (MQ=255) cAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTg < 1:1143643/150‑1 (MQ=255) cAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTg < 2:4395153/150‑1 (MQ=255) ggTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGtt < 1:1854825/150‑1 (MQ=255) cgaGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCAGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTgg < 2:5364419/150‑1 (MQ=255) aGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCa < 2:1694449/150‑1 (MQ=255) ccccGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGCTCCTGCATGGACAGTGGCCACCGAATTACGATTTTGTTCTATTTGGCagag > 2:2996124/1‑150 (MQ=255) cccGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGc > 2:4497217/1‑150 (MQ=255) cccGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGAGTTTGTTCTATTTGGCAGAGc > 2:3810678/1‑150 (MQ=255) cccGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGGTTGACTGTGTAGGAGCGGGCTTTCCCGCGAAGCAGGCGCCACCGAACCTGCATGGAATGTGGCCACCCAAATACGATTTTGTTCTATTTTGCAGAGc > 1:3404559/1‑150 (MQ=255) cccGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGGTTGACTGTGTAGGAGCGGGCTTGCCCGCGAAGCAGGCGCCACCGATCCGGCCTGGAATGTGGCCACCGACTTACGATTTTGTTCTATTTGGCAGAGc > 1:3586511/1‑150 (MQ=255) ccGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGTCCAAGGTCGCCCCCTTTGACGGTGTAGGAGCGGGCTTGCCCCCGCTGCAGGCGCCACCGCTCCGGCAATGGCTGTGGCCCCCCCCTTAAGATTTTTTTCTATTTTGCAGAGCg > 1:3831800/1‑150 (MQ=255) ccGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAATGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTTTTGTATTTTGCagaggg > 1:4064079/1‑148 (MQ=255) cGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCga < 1:705513/150‑1 (MQ=255) cGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCga < 2:4077781/150‑1 (MQ=255) cGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCga < 1:3440838/150‑1 (MQ=255) aaGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGagag < 1:4945461/150‑1 (MQ=255) agtaagtaAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTgg < 1:2087339/150‑1 (MQ=255) gtaagCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGGTTGACTGTGTAGGAGCGGGCTTGCCCCCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGTtgtg > 2:2053609/1‑150 (MQ=255) taagCGTAAACCCGAGCGGGGCGGCCCACGTCCCCCCCGTTGACTGTGTTGGAGCGGGCTTTCCCGCGAAGCAGGCGCCCCCCCTCCGGCCGGGCAAGTGGCCCCCGAAGTACGATTTTTTTGTATTTGGGAGAGCGAGAGTGGGTGTGa > 1:263761/1‑150 (MQ=255) taagCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGa < 2:3062731/150‑1 (MQ=255) taagCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGGAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGa < 2:112996/150‑1 (MQ=255) agCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGc < 2:2935586/150‑1 (MQ=255) tAAACCCGAGCGGGGCGACCAAGGTCGCCCCCTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAAc > 1:3163293/1‑150 (MQ=255) aaaCCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACg > 2:3443708/1‑150 (MQ=255) aaaCCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACg > 2:4046399/1‑150 (MQ=255) aaCCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGa < 2:195934/150‑1 (MQ=255) cccGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGc < 2:2825055/150‑1 (MQ=255) cccGAGCGGGGCGACCAACGTCGCCCCCTTTTACTGTGTAGGAGCGGGCTTGCCCGCCATGCAGGCGCCACCGATCCAGCATTGAATGTGGCCACCCAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGc > 2:4666510/1‑150 (MQ=255) aaacGGGGCGACCTTGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGACTGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCtt > 2:1361511/4‑150 (MQ=255) aacGGGGCGACCTTGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGACTGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCttt > 1:4248200/3‑150 (MQ=255) aacGGGGCGACCTTGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCttt > 1:4248122/3‑150 (MQ=255) gCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTa > 1:4712328/1‑150 (MQ=255) ggggCGACCTTGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAAc > 1:1284792/1‑150 (MQ=255) ggggCGACCTTGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAAc > 1:485041/1‑150 (MQ=255) gggCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACt > 1:2768274/1‑150 (MQ=255) gggCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACt > 1:2265176/1‑150 (MQ=255) gggCGACCAAGGTCGCCCCGTTTGACGGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACt > 2:3555592/1‑150 (MQ=255) gCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTc > 1:449722/1‑150 (MQ=255) gACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTg > 2:3717401/1‑150 (MQ=255) aCCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTgc > 2:5057317/1‑150 (MQ=255) ccAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTgcg > 2:1717444/1‑150 (MQ=255) cAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCaga > 1:1689190/1‑109 (MQ=255) cAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTgcgc > 1:3223222/1‑150 (MQ=255) | CCGTCCGAGGACGAACTCGATGAAGTGATCGAGACGGACGAGGAGGGTGTCGAGGCTGTAGCGCCAGACAATGAAAATGAAGAAGCTGCAGGTGCCGACGAGGCCCCGCAAGAGTAAGTAAGCGTAAACCCGAGCGGGGCGACCAAGGTCGCCCCGTTTGACTGTGTAGGAGCGGGCTTGCCCGCGATGCAGGCGCCACCGATCCTGCATGGAATGTGGCCACCGAATTACGATTTTGTTCTATTTGGCAGAGCGAGAGTGGATGTGAGCAAACGAGCCTTTAACTTCTGCGC > NC_002947/1973770‑1974062 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |