| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,981,205 | C→G | 5.1% | intergenic (+101/‑199) | rpsA → / → ihfB | 30S ribosomal protein S1/integration host factor subunit beta |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,981,205 | 0 | C | G | 5.1% | 562.6 / 13.6 | 168 | intergenic (+101/‑199) | rpsA/ihfB | 30S ribosomal protein S1/integration host factor subunit beta |
| Reads supporting (aligned to +/- strand): ref base C (92/67); new base G (2/7); total (94/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.43e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 168 total aligned reads displayed.
ACCACCATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTGTTCAAATCCTTCCCGGCGT > NC_002947/1981057‑1981351 | accaccATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCa > 2:3563385/1‑150 (MQ=255) caTGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTg < 2:4137652/150‑1 (MQ=255) caTGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTg < 1:4707250/150‑1 (MQ=255) ctgcgctgcTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGaa < 2:5196518/150‑1 (MQ=255) tgcgctgcTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCCTGAAGCTGGCgtgt < 2:4529274/150‑4 (MQ=255) gcgctgcTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGc < 2:4581085/150‑1 (MQ=255) gctgctGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTTTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGccc < 1:151418/150‑1 (MQ=255) gctgctGCGCGAAGCAATGGCCAACCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCCTGAAGCTGGCgtgttcc < 1:872058/150‑7 (MQ=255) ctgctgCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCCTGAAGCTGGCgtgttcca < 1:4085336/150‑8 (MQ=255) gctgcGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGtg > 2:1523013/1‑149 (MQ=255) ctgcGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGt > 1:1445491/1‑150 (MQ=255) ctgcGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTg < 2:392626/150‑1 (MQ=255) tgcGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGt < 1:1195802/150‑1 (MQ=255) cgcgAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAg < 2:580550/150‑1 (MQ=255) gcgAAGCAATGGCCAAGCAGACCTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTGTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGGTGTAgg > 2:3015552/1‑150 (MQ=255) gAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAg > 1:1525489/1‑150 (MQ=255) gAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAg > 1:2057133/1‑150 (MQ=255) gCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCAc > 1:4629924/1‑150 (MQ=255) ccAAGCAGAACTGAGTTCTGTTTGATCGGTAAAATGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCAcc > 1:5131609/1‑150 (MQ=255) cAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCAccc < 1:1774915/150‑1 (MQ=255) aaGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCcg < 1:3291809/150‑1 (MQ=255) aaaaGAACTAAGTTCTGATTGATCGGAAAAAATGTAGACCCTAGGGTCGCCC‑‑ATTTTTTATATACCCGAAAAGGTGGTGCGTCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTATTAGGAGCGGGTTCACCcgc > 2:4801915/4‑150 (MQ=255) aGCAGACCTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCcgc < 1:4112803/150‑1 (MQ=255) gCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCT‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCcgc > 1:2284195/1‑150 (MQ=255) aGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGaa > 1:1052612/1‑150 (MQ=255) aaCTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGc > 1:2954/1‑150 (MQ=255) cTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAg < 1:4523496/150‑1 (MQ=255) ttCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGcc > 2:2710191/1‑150 (MQ=255) tGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACt > 2:2164513/1‑150 (MQ=255) tGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACt > 2:3997994/1‑150 (MQ=255) tGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGcc > 2:3587912/1‑150 (MQ=255) ggTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCt > 2:5394148/1‑150 (MQ=255) ggTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCt > 2:1857940/1‑150 (MQ=255) tAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTaa < 1:2206808/150‑1 (MQ=255) aaaaGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGc < 2:1558872/150‑1 (MQ=255) aaaGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCg > 1:3339214/1‑150 (MQ=255) aaaGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCg > 1:1607773/1‑150 (MQ=255) aaGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCgg > 2:2336841/1‑150 (MQ=255) aaGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCgg > 2:2618156/1‑150 (MQ=255) aaGGGCGACCCGAGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCgg > 1:5434033/1‑150 (MQ=255) aGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGt < 2:1967925/150‑1 (MQ=255) aGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGt > 2:3546870/1‑150 (MQ=255) aGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCCTGAAGCTGGCg > 2:5174606/1‑90 (MQ=255) aGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCCTGAAGCTGGCg < 1:5174606/90‑1 (MQ=255) gggCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCAc < 1:3257409/114‑1 (MQ=255) gggCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCAc > 2:3257409/1‑114 (MQ=255) gggCGACCCGAGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTa > 1:3059883/1‑150 (MQ=255) gggCGACCCGAGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTa > 2:2927198/1‑150 (MQ=255) ggCGACCCGAGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAg > 2:3342788/1‑150 (MQ=255) cccTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCAt > 2:491088/1‑150 (MQ=255) cGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCtt < 1:3997994/150‑1 (MQ=255) cGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCtt < 1:3546870/150‑1 (MQ=255) cGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCtt < 1:3547238/150‑1 (MQ=255) gTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGaa < 1:1613085/150‑1 (MQ=255) gTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGaa < 2:4839294/150‑1 (MQ=255) gTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGaa < 1:4368324/150‑1 (MQ=255) gTCGCCA‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGaa < 1:2927198/150‑1 (MQ=255) tagCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAAt < 1:3797260/148‑1 (MQ=255) gCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTa < 2:888128/150‑1 (MQ=255) gCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGGTGTAGGAGCGGGTTCACCCGCGAAGCCGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTa > 1:3456555/1‑150 (MQ=255) ccc‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTAc < 2:3179217/150‑1 (MQ=255) ccc‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTAc > 1:5448067/1‑150 (MQ=255) cc‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACt > 1:5297768/1‑150 (MQ=255) cc‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACt < 1:780886/150‑1 (MQ=255) ttttttttGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCAc < 2:648801/94‑1 (MQ=255) ttttttttGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGACCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTc > 1:5051864/1‑150 (MQ=255) tttttGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAAt < 1:891063/150‑1 (MQ=255) tttttGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAAt < 2:3992975/150‑1 (MQ=255) tttGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCt < 2:2752153/150‑1 (MQ=255) ttGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCtt > 1:4468355/1‑150 (MQ=255) tCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAAt > 1:3951928/1‑150 (MQ=255) tCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAAt > 1:1883835/1‑150 (MQ=255) cgcgACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCCATCTTGAAttt > 2:5284338/1‑150 (MQ=255) gACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAAtttttt < 1:484338/150‑1 (MQ=255) gACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAAtttttt < 2:3618043/150‑1 (MQ=255) gACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAAtttttt > 1:2538731/1‑150 (MQ=255) ccAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTtta > 2:3473828/1‑150 (MQ=255) cAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCcg > 2:2417479/1‑79 (MQ=255) cAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCcg < 1:2417479/79‑1 (MQ=255) aGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAAttttttt > 2:3725537/1‑147 (MQ=255) aGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAAttttttt < 1:3725537/147‑1 (MQ=255) tttgtgCGGCGGATGTCACTGCTGTAACACGCCAGCTTGAGGCTGGAGAATACATTTTTATGATAGTGTTCTAAGGCGAATCAGGGGACACTGGCATATATATGAGGTTGTCCATTATTGAATTAGTTCTATCTTGAATTTTTTTATTaa < 2:4378353/147‑1 (MQ=255) gtggtgCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTaa < 1:2710191/150‑1 (MQ=255) tggtgCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTaat > 2:3760310/1‑149 (MQ=255) ggcggATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGa < 1:5394148/150‑1 (MQ=255) cggATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATc > 1:4850902/1‑150 (MQ=255) aCTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTCGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTGt > 2:366849/1‑150 (MQ=255) ctgctgGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTATACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTGtt > 2:2460276/1‑150 (MQ=255) tgGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTATGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTATGTCAAGATCCACCCTGTTCaat > 2:2260013/1‑149 (MQ=255) tgGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAATATCCACCCTGTTCaaa > 2:1407432/1‑150 (MQ=255) tgGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTGTTCaaa > 1:3630250/1‑150 (MQ=255) tgGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTGTTCaaa > 2:76552/1‑150 (MQ=255) ggAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAA‑TTTTTTATTAAGTCAAGATCCACCCTGTTCAAATc < 1:4012636/150‑1 (MQ=255) aaCACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTGTTCAAATcc > 2:4956118/1‑150 (MQ=255) acacGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTGTTCAAATCCt < 2:2284195/150‑1 (MQ=255) ttcGCCAGCCTGAAGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTGTTCAAATCCtt > 1:1055876/3‑150 (MQ=255) cAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTGTTCAAATCCTTCCCgg > 1:1274741/1‑150 (MQ=255) cAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTGTTCAAATCCTTCCCgg < 2:4704466/150‑1 (MQ=255) ttCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAAt > 1:1761800/1‑87 (MQ=255) ttCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAAt < 2:1761800/87‑1 (MQ=255) | ACCACCATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGACCATTCTTGAATTACTTCAATCTTGAATTTTTTTATTAAGTCAAGATCCACCCTGTTCAAATCCTTCCCGGCGT > NC_002947/1981057‑1981351 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |