| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,019,127 | T→G | 5.4% | L120R (CTG→CGG) | PP_1797 → | HlyD family secretion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,019,127 | 0 | T | G | 5.4% | 605.3 / 15.8 | 177 | L120R (CTG→CGG) | PP_1797 | HlyD family secretion protein |
| Reads supporting (aligned to +/- strand): ref base T (86/81); new base G (7/3); total (93/84) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.36e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 177 total aligned reads displayed.
GGCATCGTCAAAGAGCTGCATGCCCGCGATGGGGACCTGGTGAAGAAGGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACGATTCGTTGCTGGGCGAAATCTCGGTCAACCG > NC_002947/2018982‑2019274 | ggCATCGTCAAAGAGCTGCATGCCCGCGATGGGGACCTGGTGAAGAAGGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGt < 2:3044018/150‑1 (MQ=255) aTCGTCAAAGAGCTGCATGCCCGCGATGGGGACCTGGTGAAGAAGGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGcc > 2:2440896/1‑150 (MQ=255) tCGTCAAAGAGCTGCATGCCCGCGATGGGGACCTGGTGAAGAAGGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCAGGCGTGcct < 1:4496555/150‑2 (MQ=255) aaaGAGCTGCATGCCCGCGATGGGGACCTGGTGAAGAAGGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGt > 1:3716562/1‑150 (MQ=255) aaaGAGCTGCATGCCCGCGATGGGGACCTGGTGAAGAAGGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGt > 2:2576972/1‑150 (MQ=255) agagCTGCATGCCCGCGATGGGGACCTGGTGAAGAAGGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGGGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGa < 2:969095/150‑1 (MQ=255) agagCTGCATGCCCGCGATGGGGACCTGGTGAAGAAGGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGa > 2:2889294/1‑150 (MQ=255) agagCTGCATGCCCGCGATGGGGACCTGGTGAAGAAGGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGa > 2:654018/1‑150 (MQ=255) gCATGCCCGCGATGGGGACCTGGTGAAGAAGGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTTTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCtt < 1:2916644/150‑1 (MQ=255) gCATGCCCGCGATGGGGACCTGGTGAAGAAGGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCtt > 1:4002270/1‑150 (MQ=255) aTGCCCGCGATGGGGACCTGGTGAAGAAGGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTgg > 1:4856043/1‑150 (MQ=255) gCCCGCGAAGGGGACCTGGTGAAGAAGGGCGATCCGCAGATTTTGCTGGATGACTCGCAGCTCAGCGCCGAGAATGAGACCACCCGCAACCAACTGATTGTTGCCCGTTAAAAAGAGGCACGACTGCGAGCCGAGCGTGACGGCTTGGAc > 2:1807109/1‑150 (MQ=255) ccGCGATGGGGACCTGGTGAAGAATGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTc > 1:4215225/1‑150 (MQ=255) ggACCTGGTGAAGAAGGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTc > 2:1631388/1‑150 (MQ=255) gACCTGGTGAAGAAGGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGAGTGACGGCTTGGACTCGATCCCGTCg < 2:486426/150‑1 (MQ=255) aCCTGGTGAAGAAGGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCgg < 1:4573446/150‑1 (MQ=255) ccTGGTGAAGAAGGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGt < 1:3806161/150‑1 (MQ=255) ggTGAAGAAGGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGAt < 1:5182695/150‑1 (MQ=255) gTGAAGAAGGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATa > 2:4577922/1‑150 (MQ=255) tGAAGAAGGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATaa < 2:3645153/150‑1 (MQ=255) gaagaaGGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAAt > 2:4987443/1‑150 (MQ=255) aagaagGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATg > 2:4281479/1‑150 (MQ=255) aagGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGaa < 2:1935782/150‑1 (MQ=255) aagGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGaa < 2:1570200/150‑1 (MQ=255) aagGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGaa < 1:3445983/150‑1 (MQ=255) agGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAg < 1:5130613/150‑1 (MQ=255) gggCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAgg < 2:4002270/150‑1 (MQ=255) ggCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGt > 1:3596210/1‑150 (MQ=255) cGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTAc < 1:4678245/150‑1 (MQ=255) gCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTc < 1:1270802/150‑1 (MQ=255) gCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTc < 1:4822555/150‑1 (MQ=255) cTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCt < 1:3815144/150‑1 (MQ=255) aTTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGaa < 1:5386774/135‑1 (MQ=255) tgtgCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACcg > 2:3657295/1‑150 (MQ=255) tgCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTg < 2:3171313/87‑1 (MQ=255) tgCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTg > 1:3171313/1‑87 (MQ=255) cTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACcgcgcg > 2:526268/1‑150 (MQ=255) tGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCgcgcgc > 2:73971/1‑150 (MQ=255) ggATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCa > 1:1399912/1‑150 (MQ=255) gATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCaa > 2:4888362/1‑150 (MQ=255) gATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCaa > 1:2661652/1‑150 (MQ=255) gAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCaagaa < 1:4770829/150‑1 (MQ=255) gCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCt < 2:3882629/150‑1 (MQ=255) gCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCt < 2:1236241/150‑1 (MQ=255) gCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCt < 2:4854181/150‑1 (MQ=255) cAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTg > 2:1534919/1‑150 (MQ=255) tCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAg > 2:2429236/1‑150 (MQ=255) tCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAg < 1:2105455/150‑1 (MQ=255) gcgcCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTg > 1:2929609/1‑150 (MQ=255) gcCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGag > 1:967706/1‑150 (MQ=255) ccGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGagc < 2:1177974/150‑1 (MQ=255) gAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATCATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGagcag > 2:3436151/1‑150 (MQ=255) aGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGagcagc < 1:3024654/150‑1 (MQ=255) gTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAgcagca < 2:613607/150‑1 (MQ=255) tATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGcagcag < 1:5267360/150‑1 (MQ=255) tGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGgt > 1:4918933/1‑150 (MQ=255) tGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGgt < 2:2901338/150‑1 (MQ=255) gAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATACTGGAAGGTACCGATTCTGACCGCGCGCaagaag > 1:3552193/1‑127 (MQ=255) gAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCaagaag < 2:3552193/127‑1 (MQ=255) gAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGgtg > 1:107583/1‑150 (MQ=255) gAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGgtg > 1:2071881/1‑150 (MQ=255) gTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGtt > 1:1454097/1‑150 (MQ=255) tCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTc < 2:1724780/150‑1 (MQ=255) cACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACcgcgc > 1:856145/1‑114 (MQ=255) cACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCaa < 1:2298376/150‑1 (MQ=255) gCAACCAACTGATTGGTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGccc < 2:4158361/150‑1 (MQ=255) gCAACCAACTGATGGGTGCCCGGTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCATGGACTCGATCCCGTCGGTGATAATTGAAGGTACCGATTCTGACCGCGCGCTAGAAGCGCTGGCAGGTGAGGAGCAGGTGTTCAAGGcca < 2:3813343/150‑2 (MQ=255) ccaacTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCa < 2:5321995/150‑1 (MQ=255) ccaacTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTAAAGGCCCGCCa > 2:2150581/1‑150 (MQ=255) caacTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCAc > 1:4415700/1‑150 (MQ=255) aacTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACg > 2:3179389/1‑150 (MQ=255) aacTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACg > 1:2929553/1‑150 (MQ=255) tGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAg < 1:3518605/137‑1 (MQ=255) tGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAg > 2:3518605/1‑137 (MQ=255) tGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACGAtt < 1:3645704/150‑1 (MQ=255) gATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACGATTc > 2:1596343/1‑150 (MQ=255) gATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCATCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACGATTc < 2:1887705/150‑1 (MQ=255) gttgCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACGATTCGTTg < 2:4330742/150‑1 (MQ=255) gCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGag < 1:5427598/114‑1 (MQ=255) gCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGag > 2:5427598/1‑114 (MQ=255) gCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACGATTCGTTGCTg < 2:5344817/150‑1 (MQ=255) tataAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACGATTCGTTGCTGGGCGaa < 2:2661652/150‑1 (MQ=255) ataAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACGATTCGTTGCTGGGCGaaa < 2:2295728/150‑1 (MQ=255) acgctcggCACGCAGGCGTGCCTAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCCCGATTCGTTGCTGGGCGAAAt > 1:2293507/7‑150 (MQ=255) aaaGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACGATTCGTTGCTGGGCGAAAtc > 2:1035681/1‑150 (MQ=255) aaaGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACGATTCGTTGCTGGGCGAAAtc > 2:1115888/1‑150 (MQ=255) ctcggCACGCAGGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCCAGGCCCGCCACGATTCGTTGCTGGGCGAAAcctc > 2:2289041/4‑150 (MQ=255) tcggCACGCAGGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACGATTCGTTGCTg < 2:1704453/136‑1 (MQ=255) tcggCACGCAGGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACGATTCGTTGCTg > 1:1704453/3‑138 (MQ=255) tcggCACGCAGGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACGATTCGTTGCTGGGCGAAATCTCg > 2:1914358/3‑150 (MQ=255) gagGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACGATTCGTTGCTGGGCGAAATCTCg < 1:2573045/150‑1 (MQ=255) agGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGt < 1:3251000/98‑1 (MQ=255) agGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGt > 2:3251000/1‑98 (MQ=255) gCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCaag > 2:5395292/1‑82 (MQ=255) gCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACGATTCGTTGCTGGGCGAAATCTCGGTc > 1:1651680/1‑150 (MQ=255) gCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACGATTCGTTGCTGGGCGAAATCTCGGTc > 2:4648234/1‑150 (MQ=255) gCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACGATTCGTTGCTGGGCGAAATCTCGGTc > 2:3881700/1‑150 (MQ=255) cACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACGATTCGTTGCTGGGCGAAATCTCGGTCa > 1:4994862/1‑150 (MQ=255) aCGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACGATTCGTTGCTGGGCGAAATCTCGGt > 1:627561/1‑147 (MQ=255) ccTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACGATTCGTTGCTGGGCGAAATCTCGGTCAACCg > 2:611050/1‑150 (MQ=255) | GGCATCGTCAAAGAGCTGCATGCCCGCGATGGGGACCTGGTGAAGAAGGGCGATCCGCTGATTGTGCTGGATGAGTCGCAGCTCAGCGCCGAGTATGAGTCCACCCGCAACCAACTGATTGTTGCCCGTTATAAAGAGGCACGCCTGCGTGCCGAGCGTGACGGCTTGGACTCGATCCCGTCGGTGATAATGGAAGGTACCGATTCTGACCGCGCGCAAGAAGCGCTGGCAGGTGAGCAGCAGGTGTTCAAGGCCCGCCACGATTCGTTGCTGGGCGAAATCTCGGTCAACCG > NC_002947/2018982‑2019274 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |